Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm26159-201ENSMUST00000158968 104 ntBASIC2.63□□□□□ -1.99
Ddx28Q9CWT6 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC2.63□□□□□ -1.99
Ddx28Q9CWT6 Gm6660-201ENSMUST00000179149 468 ntBASIC2.63□□□□□ -1.99
Ddx28Q9CWT6 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.63□□□□□ -1.99
Ddx28Q9CWT6 AC105958.2-201ENSMUST00000214167 191 ntBASIC2.63□□□□□ -1.99
Ddx28Q9CWT6 AC144783.2-201ENSMUST00000219089 195 ntBASIC2.63□□□□□ -1.99
Ddx28Q9CWT6 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
Ddx28Q9CWT6 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.63□□□□□ -1.99
Ddx28Q9CWT6 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.63□□□□□ -1.99
Ddx28Q9CWT6 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
Ddx28Q9CWT6 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.62□□□□□ -1.99
Ddx28Q9CWT6 Gm7071-201ENSMUST00000120458 462 ntBASIC2.62□□□□□ -1.99
Ddx28Q9CWT6 Gm14551-201ENSMUST00000120802 256 ntBASIC2.62□□□□□ -1.99
Ddx28Q9CWT6 Gm11834-201ENSMUST00000122257 585 ntBASIC2.62□□□□□ -1.99
Ddx28Q9CWT6 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC2.62□□□□□ -1.99
Ddx28Q9CWT6 Mir1942-201ENSMUST00000157274 63 ntBASIC2.62□□□□□ -1.99
Ddx28Q9CWT6 Gm22891-201ENSMUST00000158641 164 ntBASIC2.62□□□□□ -1.99
Ddx28Q9CWT6 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Ddx28Q9CWT6 Gm18520-201ENSMUST00000174783 658 ntBASIC2.62□□□□□ -1.99
Ddx28Q9CWT6 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC2.62□□□□□ -1.99
Ddx28Q9CWT6 Gm23860-201ENSMUST00000179446 132 ntBASIC2.62□□□□□ -1.99
Ddx28Q9CWT6 Gm27582-201ENSMUST00000184084 126 ntBASIC2.62□□□□□ -1.99
Ddx28Q9CWT6 Gm27249-201ENSMUST00000185049 328 ntBASIC2.62□□□□□ -1.99
Ddx28Q9CWT6 Gm23370-202ENSMUST00000197008 129 ntBASIC2.62□□□□□ -1.99
Ddx28Q9CWT6 Gm44903-201ENSMUST00000206840 130 ntBASIC2.62□□□□□ -1.99
Ddx28Q9CWT6 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC2.62□□□□□ -1.99
Ddx28Q9CWT6 AC150314.1-201ENSMUST00000214798 238 ntBASIC2.62□□□□□ -1.99
Ddx28Q9CWT6 CT009718.4-201ENSMUST00000221881 109 ntBASIC2.62□□□□□ -1.99
Ddx28Q9CWT6 Gm9370-201ENSMUST00000222787 609 ntBASIC2.62□□□□□ -1.99
Ddx28Q9CWT6 CT485612.4-201ENSMUST00000223405 250 ntBASIC2.62□□□□□ -1.99
Ddx28Q9CWT6 CT009713.9-201ENSMUST00000223604 389 ntBASIC2.62□□□□□ -1.99
Ddx28Q9CWT6 AC241593.1-201ENSMUST00000224768 397 ntBASIC2.62□□□□□ -1.99
Ddx28Q9CWT6 AC154600.1-201ENSMUST00000226480 714 ntBASIC2.62□□□□□ -1.99
Ddx28Q9CWT6 AC126440.1-201ENSMUST00000227098 349 ntBASIC2.62□□□□□ -1.99
Ddx28Q9CWT6 Gm23615-201ENSMUST00000082602 65 ntBASIC2.62□□□□□ -1.99
Ddx28Q9CWT6 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Ddx28Q9CWT6 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Ddx28Q9CWT6 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.61□□□□□ -1.99
Ddx28Q9CWT6 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Ddx28Q9CWT6 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Ddx28Q9CWT6 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Ddx28Q9CWT6 Mir542-201ENSMUST00000102186 85 ntBASIC2.61□□□□□ -1.99
Ddx28Q9CWT6 Mir499-201ENSMUST00000102357 79 ntBASIC2.61□□□□□ -1.99
Ddx28Q9CWT6 Gm14448-201ENSMUST00000116383 210 ntBASIC2.61□□□□□ -1.99
Ddx28Q9CWT6 Gm14940-201ENSMUST00000119309 495 ntBASIC2.61□□□□□ -1.99
Ddx28Q9CWT6 Gm11363-201ENSMUST00000121672 548 ntBASIC2.61□□□□□ -1.99
Ddx28Q9CWT6 Gm16533-201ENSMUST00000140035 228 ntBASIC2.61□□□□□ -1.99
Ddx28Q9CWT6 Gm22322-201ENSMUST00000157151 111 ntBASIC2.61□□□□□ -1.99
Ddx28Q9CWT6 Gm23137-201ENSMUST00000157559 107 ntBASIC2.61□□□□□ -1.99
Ddx28Q9CWT6 Gm22839-201ENSMUST00000158436 304 ntBASIC2.61□□□□□ -1.99
Ddx28Q9CWT6 Gm24757-201ENSMUST00000176987 371 ntBASIC2.61□□□□□ -1.99
Ddx28Q9CWT6 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC2.61□□□□□ -1.99
Ddx28Q9CWT6 Gm38050-201ENSMUST00000191904 238 ntBASIC2.61□□□□□ -1.99
Ddx28Q9CWT6 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Ddx28Q9CWT6 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC2.61□□□□□ -1.99
Ddx28Q9CWT6 Gm44446-201ENSMUST00000204864 255 ntBASIC2.61□□□□□ -1.99
Ddx28Q9CWT6 CT485612.2-201ENSMUST00000223014 151 ntBASIC2.61□□□□□ -1.99
Ddx28Q9CWT6 Gm22806-201ENSMUST00000082738 136 ntBASIC2.61□□□□□ -1.99
Ddx28Q9CWT6 Gm23517-201ENSMUST00000082830 192 ntBASIC2.61□□□□□ -1.99
Ddx28Q9CWT6 Gm22353-201ENSMUST00000083918 136 ntBASIC2.61□□□□□ -1.99
Ddx28Q9CWT6 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Ddx28Q9CWT6 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Ddx28Q9CWT6 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Ddx28Q9CWT6 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Ddx28Q9CWT6 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Ddx28Q9CWT6 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Ddx28Q9CWT6 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
Ddx28Q9CWT6 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
Ddx28Q9CWT6 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
Ddx28Q9CWT6 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Ddx28Q9CWT6 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
Ddx28Q9CWT6 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
Ddx28Q9CWT6 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Ddx28Q9CWT6 Gm12765-201ENSMUST00000117273 615 ntBASIC2.6□□□□□ -1.99
Ddx28Q9CWT6 Gm16242-201ENSMUST00000117741 334 ntBASIC2.6□□□□□ -1.99
Ddx28Q9CWT6 Gm15029-201ENSMUST00000119742 199 ntBASIC2.6□□□□□ -1.99
Ddx28Q9CWT6 Gm13153-201ENSMUST00000120969 637 ntBASIC2.6□□□□□ -1.99
Ddx28Q9CWT6 Gm26256-201ENSMUST00000122499 186 ntBASIC2.6□□□□□ -1.99
Ddx28Q9CWT6 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC2.6□□□□□ -1.99
Ddx28Q9CWT6 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
Ddx28Q9CWT6 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC2.6□□□□□ -1.99
Ddx28Q9CWT6 Gm23325-201ENSMUST00000157422 129 ntBASIC2.6□□□□□ -1.99
Ddx28Q9CWT6 Gm24191-201ENSMUST00000157977 122 ntBASIC2.6□□□□□ -1.99
Ddx28Q9CWT6 Gm24577-201ENSMUST00000158580 63 ntBASIC2.6□□□□□ -1.99
Ddx28Q9CWT6 Gm24019-201ENSMUST00000178620 107 ntBASIC2.6□□□□□ -1.99
Ddx28Q9CWT6 Gm25360-201ENSMUST00000178786 191 ntBASIC2.6□□□□□ -1.99
Ddx28Q9CWT6 Gm23191-201ENSMUST00000179147 107 ntBASIC2.6□□□□□ -1.99
Ddx28Q9CWT6 Gm26243-201ENSMUST00000179260 107 ntBASIC2.6□□□□□ -1.99
Ddx28Q9CWT6 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC2.6□□□□□ -1.99
Ddx28Q9CWT6 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC2.6□□□□□ -1.99
Ddx28Q9CWT6 Gm9402-201ENSMUST00000196849 388 ntBASIC2.6□□□□□ -1.99
Ddx28Q9CWT6 Gm43723-201ENSMUST00000196886 189 ntBASIC2.6□□□□□ -1.99
Ddx28Q9CWT6 Gm44870-201ENSMUST00000207291 357 ntBASIC2.6□□□□□ -1.99
Ddx28Q9CWT6 AL603630.1-201ENSMUST00000214781 147 ntBASIC2.6□□□□□ -1.99
Ddx28Q9CWT6 AC153864.2-201ENSMUST00000220424 292 ntBASIC2.6□□□□□ -1.99
Ddx28Q9CWT6 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.6□□□□□ -1.99
Ddx28Q9CWT6 AC129541.1-201ENSMUST00000226940 523 ntBASIC2.6□□□□□ -1.99
Ddx28Q9CWT6 AC113031.4-201ENSMUST00000228381 514 ntBASIC2.6□□□□□ -1.99
Ddx28Q9CWT6 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Ddx28Q9CWT6 Snora23-201ENSMUST00000082517 184 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms