Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm37598-201ENSMUST00000194506 1301 ntBASIC2.58□□□□□ -2
Smc1aQ9CU62 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.58□□□□□ -2
Smc1aQ9CU62 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.58□□□□□ -2
Smc1aQ9CU62 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
Smc1aQ9CU62 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.57□□□□□ -2
Smc1aQ9CU62 Gm24049-201ENSMUST00000102409 100 ntBASIC2.57□□□□□ -2
Smc1aQ9CU62 Gm17132-201ENSMUST00000109542 1158 ntBASIC2.57□□□□□ -2
Smc1aQ9CU62 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC2.57□□□□□ -2
Smc1aQ9CU62 Gm14652-201ENSMUST00000118479 235 ntBASIC2.57□□□□□ -2
Smc1aQ9CU62 Gm11835-201ENSMUST00000120635 663 ntBASIC2.57□□□□□ -2
Smc1aQ9CU62 Gm12443-201ENSMUST00000122308 323 ntBASIC2.57□□□□□ -2
Smc1aQ9CU62 Gm24937-201ENSMUST00000122597 134 ntBASIC2.57□□□□□ -2
Smc1aQ9CU62 Gm25052-201ENSMUST00000122661 158 ntBASIC2.57□□□□□ -2
Smc1aQ9CU62 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC2.57□□□□□ -2
Smc1aQ9CU62 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC2.57□□□□□ -2
Smc1aQ9CU62 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.57□□□□□ -2
Smc1aQ9CU62 Gm26280-201ENSMUST00000157096 101 ntBASIC2.57□□□□□ -2
Smc1aQ9CU62 Gm22083-201ENSMUST00000157586 102 ntBASIC2.57□□□□□ -2
Smc1aQ9CU62 Gm26393-201ENSMUST00000157625 129 ntBASIC2.57□□□□□ -2
Smc1aQ9CU62 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.57□□□□□ -2
Smc1aQ9CU62 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
Smc1aQ9CU62 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC2.57□□□□□ -2
Smc1aQ9CU62 Snord116l14-201ENSMUST00000179875 94 ntBASIC2.57□□□□□ -2
Smc1aQ9CU62 Mir6335-201ENSMUST00000184081 98 ntBASIC2.57□□□□□ -2
Smc1aQ9CU62 Gm28825-201ENSMUST00000186233 238 ntBASIC2.57□□□□□ -2
Smc1aQ9CU62 Gm28951-201ENSMUST00000190742 313 ntBASIC2.57□□□□□ -2
Smc1aQ9CU62 Gm32033-201ENSMUST00000193483 339 ntBASIC2.57□□□□□ -2
Smc1aQ9CU62 Gm38238-201ENSMUST00000194334 346 ntBASIC2.57□□□□□ -2
Smc1aQ9CU62 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.57□□□□□ -2
Smc1aQ9CU62 Gm9377-201ENSMUST00000207227 623 ntBASIC2.57□□□□□ -2
Smc1aQ9CU62 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC2.57□□□□□ -2
Smc1aQ9CU62 CT030187.1-201ENSMUST00000220605 252 ntBASIC2.57□□□□□ -2
Smc1aQ9CU62 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.57□□□□□ -2
Smc1aQ9CU62 Gm25130-201ENSMUST00000082650 156 ntBASIC2.57□□□□□ -2
Smc1aQ9CU62 Gm22443-201ENSMUST00000082890 107 ntBASIC2.57□□□□□ -2
Smc1aQ9CU62 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC2.57□□□□□ -2
Smc1aQ9CU62 Gm37761-201ENSMUST00000194989 2098 ntBASIC2.57□□□□□ -2
Smc1aQ9CU62 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.56□□□□□ -2
Smc1aQ9CU62 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Smc1aQ9CU62 Gm22779-201ENSMUST00000104085 107 ntBASIC2.56□□□□□ -2
Smc1aQ9CU62 Gm14770-201ENSMUST00000122197 312 ntBASIC2.56□□□□□ -2
Smc1aQ9CU62 Gm23212-201ENSMUST00000122718 60 ntBASIC2.56□□□□□ -2
Smc1aQ9CU62 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC2.56□□□□□ -2
Smc1aQ9CU62 Gm22099-201ENSMUST00000157925 123 ntBASIC2.56□□□□□ -2
Smc1aQ9CU62 Gm23059-201ENSMUST00000158978 107 ntBASIC2.56□□□□□ -2
Smc1aQ9CU62 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC2.56□□□□□ -2
Smc1aQ9CU62 Gm22264-201ENSMUST00000178200 107 ntBASIC2.56□□□□□ -2
Smc1aQ9CU62 Gm25361-201ENSMUST00000179358 76 ntBASIC2.56□□□□□ -2
Smc1aQ9CU62 Gm3852-201ENSMUST00000182781 264 ntBASIC2.56□□□□□ -2
Smc1aQ9CU62 Gm29073-201ENSMUST00000185563 664 ntBASIC2.56□□□□□ -2
Smc1aQ9CU62 Gm29165-201ENSMUST00000190655 664 ntBASIC2.56□□□□□ -2
Smc1aQ9CU62 Gm29211-201ENSMUST00000191470 664 ntBASIC2.56□□□□□ -2
Smc1aQ9CU62 Gm43513-201ENSMUST00000199779 1076 ntBASIC2.56□□□□□ -2
Smc1aQ9CU62 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC2.56□□□□□ -2
Smc1aQ9CU62 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.56□□□□□ -2
Smc1aQ9CU62 CT030166.2-201ENSMUST00000222021 368 ntBASIC2.56□□□□□ -2
Smc1aQ9CU62 Gm7065-201ENSMUST00000222150 474 ntBASIC2.56□□□□□ -2
Smc1aQ9CU62 AC183092.2-201ENSMUST00000225542 1153 ntBASIC2.56□□□□□ -2
Smc1aQ9CU62 AC112935.1-201ENSMUST00000227603 250 ntBASIC2.56□□□□□ -2
Smc1aQ9CU62 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.56□□□□□ -2
Smc1aQ9CU62 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC2.56□□□□□ -2
Smc1aQ9CU62 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Smc1aQ9CU62 Gm26327-201ENSMUST00000093724 111 ntBASIC2.56□□□□□ -2
Smc1aQ9CU62 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Smc1aQ9CU62 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.56□□□□□ -2
Smc1aQ9CU62 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Smc1aQ9CU62 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Smc1aQ9CU62 Gm26147-201ENSMUST00000104479 114 ntBASIC2.55□□□□□ -2
Smc1aQ9CU62 Mir344e-201ENSMUST00000104677 66 ntBASIC2.55□□□□□ -2
Smc1aQ9CU62 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC2.55□□□□□ -2
Smc1aQ9CU62 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
Smc1aQ9CU62 Gm14417-201ENSMUST00000120036 1074 ntBASIC2.55□□□□□ -2
Smc1aQ9CU62 Gm24439-201ENSMUST00000157894 117 ntBASIC2.55□□□□□ -2
Smc1aQ9CU62 Gm24212-201ENSMUST00000158258 132 ntBASIC2.55□□□□□ -2
Smc1aQ9CU62 Gm24056-201ENSMUST00000158617 146 ntBASIC2.55□□□□□ -2
Smc1aQ9CU62 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC2.55□□□□□ -2
Smc1aQ9CU62 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC2.55□□□□□ -2
Smc1aQ9CU62 Gm27028-201ENSMUST00000182303 399 ntBASIC2.55□□□□□ -2
Smc1aQ9CU62 Gm29216-201ENSMUST00000187117 492 ntBASIC2.55□□□□□ -2
Smc1aQ9CU62 Gm23370-202ENSMUST00000197008 129 ntBASIC2.55□□□□□ -2
Smc1aQ9CU62 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC2.55□□□□□ -2
Smc1aQ9CU62 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC2.55□□□□□ -2
Smc1aQ9CU62 AC157654.1-201ENSMUST00000224130 820 ntBASIC2.55□□□□□ -2
Smc1aQ9CU62 CT010506.2-201ENSMUST00000225618 183 ntBASIC2.55□□□□□ -2
Smc1aQ9CU62 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.55□□□□□ -2
Smc1aQ9CU62 AC114916.1-201ENSMUST00000228465 494 ntBASIC2.55□□□□□ -2
Smc1aQ9CU62 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Smc1aQ9CU62 Gm25628-201ENSMUST00000084002 105 ntBASIC2.55□□□□□ -2
Smc1aQ9CU62 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC2.55□□□□□ -2
Smc1aQ9CU62 Gm15183-201ENSMUST00000118933 348 ntBASIC2.54□□□□□ -2
Smc1aQ9CU62 Gm15266-201ENSMUST00000119635 255 ntBASIC2.54□□□□□ -2
Smc1aQ9CU62 Gm13720-201ENSMUST00000120741 196 ntBASIC2.54□□□□□ -2
Smc1aQ9CU62 Gm11363-201ENSMUST00000121672 548 ntBASIC2.54□□□□□ -2
Smc1aQ9CU62 Gm12956-201ENSMUST00000122184 414 ntBASIC2.54□□□□□ -2
Smc1aQ9CU62 Gm25961-201ENSMUST00000157174 135 ntBASIC2.54□□□□□ -2
Smc1aQ9CU62 Gm25624-201ENSMUST00000157222 275 ntBASIC2.54□□□□□ -2
Smc1aQ9CU62 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Smc1aQ9CU62 Gm7258-201ENSMUST00000179317 300 ntBASIC2.54□□□□□ -2
Smc1aQ9CU62 Gm11392-201ENSMUST00000181419 710 ntBASIC2.54□□□□□ -2
Smc1aQ9CU62 Igkv12-49-201ENSMUST00000197714 278 ntBASIC2.54□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms