Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Gm22668-201ENSMUST00000158716 260 ntBASIC2.56□□□□□ -2
Ccdc43Q9CR29 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Ccdc43Q9CR29 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Ccdc43Q9CR29 Gm43556-201ENSMUST00000196186 681 ntBASIC2.56□□□□□ -2
Ccdc43Q9CR29 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC2.56□□□□□ -2
Ccdc43Q9CR29 Gm44923-201ENSMUST00000206673 85 ntBASIC2.56□□□□□ -2
Ccdc43Q9CR29 Gm6109-201ENSMUST00000223297 348 ntBASIC2.56□□□□□ -2
Ccdc43Q9CR29 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC2.56□□□□□ -2
Ccdc43Q9CR29 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Ccdc43Q9CR29 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Ccdc43Q9CR29 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Ccdc43Q9CR29 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC2.55□□□□□ -2
Ccdc43Q9CR29 Gm13804-201ENSMUST00000119552 172 ntBASIC2.55□□□□□ -2
Ccdc43Q9CR29 Defa-ps13-201ENSMUST00000120695 204 ntBASIC2.55□□□□□ -2
Ccdc43Q9CR29 Gm12443-201ENSMUST00000122308 323 ntBASIC2.55□□□□□ -2
Ccdc43Q9CR29 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC2.55□□□□□ -2
Ccdc43Q9CR29 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC2.55□□□□□ -2
Ccdc43Q9CR29 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
Ccdc43Q9CR29 Gm24997-201ENSMUST00000157910 105 ntBASIC2.55□□□□□ -2
Ccdc43Q9CR29 Gm22535-201ENSMUST00000158174 119 ntBASIC2.55□□□□□ -2
Ccdc43Q9CR29 Gm24518-201ENSMUST00000180275 94 ntBASIC2.55□□□□□ -2
Ccdc43Q9CR29 Gm43529-201ENSMUST00000199178 412 ntBASIC2.55□□□□□ -2
Ccdc43Q9CR29 Gm17906-201ENSMUST00000202480 901 ntBASIC2.55□□□□□ -2
Ccdc43Q9CR29 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC2.55□□□□□ -2
Ccdc43Q9CR29 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Ccdc43Q9CR29 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.55□□□□□ -2
Ccdc43Q9CR29 CT485612.4-201ENSMUST00000223405 250 ntBASIC2.55□□□□□ -2
Ccdc43Q9CR29 AC156790.3-201ENSMUST00000226200 254 ntBASIC2.55□□□□□ -2
Ccdc43Q9CR29 AC132918.1-201ENSMUST00000227877 925 ntBASIC2.55□□□□□ -2
Ccdc43Q9CR29 Gm23448-201ENSMUST00000083151 104 ntBASIC2.55□□□□□ -2
Ccdc43Q9CR29 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.55□□□□□ -2
Ccdc43Q9CR29 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.55□□□□□ -2
Ccdc43Q9CR29 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC2.54□□□□□ -2
Ccdc43Q9CR29 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Ccdc43Q9CR29 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.54□□□□□ -2
Ccdc43Q9CR29 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Ccdc43Q9CR29 Gm14652-201ENSMUST00000118479 235 ntBASIC2.54□□□□□ -2
Ccdc43Q9CR29 Gm14588-201ENSMUST00000119895 172 ntBASIC2.54□□□□□ -2
Ccdc43Q9CR29 Gm13581-201ENSMUST00000120675 278 ntBASIC2.54□□□□□ -2
Ccdc43Q9CR29 Gm14551-201ENSMUST00000120802 256 ntBASIC2.54□□□□□ -2
Ccdc43Q9CR29 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC2.54□□□□□ -2
Ccdc43Q9CR29 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.54□□□□□ -2
Ccdc43Q9CR29 Gm23324-201ENSMUST00000157421 131 ntBASIC2.54□□□□□ -2
Ccdc43Q9CR29 Gm23332-201ENSMUST00000157424 275 ntBASIC2.54□□□□□ -2
Ccdc43Q9CR29 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC2.54□□□□□ -2
Ccdc43Q9CR29 Gm25996-201ENSMUST00000175393 117 ntBASIC2.54□□□□□ -2
Ccdc43Q9CR29 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC2.54□□□□□ -2
Ccdc43Q9CR29 Gm23144-201ENSMUST00000180226 107 ntBASIC2.54□□□□□ -2
Ccdc43Q9CR29 Gm42578-201ENSMUST00000199960 194 ntBASIC2.54□□□□□ -2
Ccdc43Q9CR29 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC2.54□□□□□ -2
Ccdc43Q9CR29 AC116589.7-201ENSMUST00000221061 239 ntBASIC2.54□□□□□ -2
Ccdc43Q9CR29 AC159203.2-201ENSMUST00000221326 193 ntBASIC2.54□□□□□ -2
Ccdc43Q9CR29 AC164117.1-201ENSMUST00000221726 239 ntBASIC2.54□□□□□ -2
Ccdc43Q9CR29 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.54□□□□□ -2
Ccdc43Q9CR29 AC139350.4-201ENSMUST00000228483 798 ntBASIC2.54□□□□□ -2
Ccdc43Q9CR29 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.54□□□□□ -2
Ccdc43Q9CR29 n-R5s202-201ENSMUST00000104517 114 ntBASIC2.53□□□□□ -2
Ccdc43Q9CR29 Gm14670-201ENSMUST00000117327 337 ntBASIC2.53□□□□□ -2
Ccdc43Q9CR29 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC2.53□□□□□ -2
Ccdc43Q9CR29 Gm14366-201ENSMUST00000121970 730 ntBASIC2.53□□□□□ -2
Ccdc43Q9CR29 Gm23586-201ENSMUST00000157657 123 ntBASIC2.53□□□□□ -2
Ccdc43Q9CR29 Mir496b-201ENSMUST00000184935 113 ntBASIC2.53□□□□□ -2
Ccdc43Q9CR29 Mir7232-201ENSMUST00000197929 74 ntBASIC2.53□□□□□ -2
Ccdc43Q9CR29 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC2.53□□□□□ -2
Ccdc43Q9CR29 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.53□□□□□ -2
Ccdc43Q9CR29 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC2.53□□□□□ -2
Ccdc43Q9CR29 AC113031.4-201ENSMUST00000228381 514 ntBASIC2.53□□□□□ -2
Ccdc43Q9CR29 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
Ccdc43Q9CR29 Mir93-201ENSMUST00000083593 88 ntBASIC2.53□□□□□ -2
Ccdc43Q9CR29 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC2.53□□□□□ -2
Ccdc43Q9CR29 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
Ccdc43Q9CR29 AC134917.1-201ENSMUST00000220517 1449 ntBASIC2.52□□□□□ -2.01
Ccdc43Q9CR29 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Ccdc43Q9CR29 Gm25168-201ENSMUST00000104189 132 ntBASIC2.52□□□□□ -2.01
Ccdc43Q9CR29 Gm12934-201ENSMUST00000119221 343 ntBASIC2.52□□□□□ -2.01
Ccdc43Q9CR29 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC2.52□□□□□ -2.01
Ccdc43Q9CR29 Gm26280-201ENSMUST00000157096 101 ntBASIC2.52□□□□□ -2.01
Ccdc43Q9CR29 Gm24900-201ENSMUST00000158128 134 ntBASIC2.52□□□□□ -2.01
Ccdc43Q9CR29 Gm26214-201ENSMUST00000158581 107 ntBASIC2.52□□□□□ -2.01
Ccdc43Q9CR29 Mir6376-201ENSMUST00000185149 131 ntBASIC2.52□□□□□ -2.01
Ccdc43Q9CR29 Gm20915-201ENSMUST00000191575 663 ntBASIC2.52□□□□□ -2.01
Ccdc43Q9CR29 Gm42857-201ENSMUST00000200823 339 ntBASIC2.52□□□□□ -2.01
Ccdc43Q9CR29 Gm44182-201ENSMUST00000204052 115 ntBASIC2.52□□□□□ -2.01
Ccdc43Q9CR29 Gm9377-201ENSMUST00000207227 623 ntBASIC2.52□□□□□ -2.01
Ccdc43Q9CR29 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC2.52□□□□□ -2.01
Ccdc43Q9CR29 CT025689.4-201ENSMUST00000225926 601 ntBASIC2.52□□□□□ -2.01
Ccdc43Q9CR29 Gm24313-201ENSMUST00000082561 133 ntBASIC2.52□□□□□ -2.01
Ccdc43Q9CR29 Gm25796-201ENSMUST00000082645 163 ntBASIC2.52□□□□□ -2.01
Ccdc43Q9CR29 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Ccdc43Q9CR29 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Ccdc43Q9CR29 Gm24889-201ENSMUST00000104388 132 ntBASIC2.51□□□□□ -2.01
Ccdc43Q9CR29 Gm14774-201ENSMUST00000117857 536 ntBASIC2.51□□□□□ -2.01
Ccdc43Q9CR29 Gm15896-201ENSMUST00000118045 440 ntBASIC2.51□□□□□ -2.01
Ccdc43Q9CR29 Gm11460-201ENSMUST00000118200 361 ntBASIC2.51□□□□□ -2.01
Ccdc43Q9CR29 Gm7916-201ENSMUST00000120325 456 ntBASIC2.51□□□□□ -2.01
Ccdc43Q9CR29 Gm25910-201ENSMUST00000157620 140 ntBASIC2.51□□□□□ -2.01
Ccdc43Q9CR29 Gm27396-201ENSMUST00000157708 58 ntBASIC2.51□□□□□ -2.01
Ccdc43Q9CR29 Gm2343-201ENSMUST00000161177 1042 ntBASIC2.51□□□□□ -2.01
Ccdc43Q9CR29 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Ccdc43Q9CR29 Gm27991-201ENSMUST00000184804 137 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms