Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Gm11893-201ENSMUST00000117829 491 ntBASIC0.67□□□□□ -2.3
Cspg4Q8VHY0 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
Cspg4Q8VHY0 Gm26101-201ENSMUST00000157246 105 ntBASIC0.67□□□□□ -2.3
Cspg4Q8VHY0 Gm22559-201ENSMUST00000157329 134 ntBASIC0.67□□□□□ -2.3
Cspg4Q8VHY0 Gm27711-201ENSMUST00000183802 118 ntBASIC0.67□□□□□ -2.3
Cspg4Q8VHY0 Gm18406-201ENSMUST00000185872 669 ntBASIC0.67□□□□□ -2.3
Cspg4Q8VHY0 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC0.67□□□□□ -2.3
Cspg4Q8VHY0 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC0.67□□□□□ -2.3
Cspg4Q8VHY0 AC163357.1-201ENSMUST00000220847 233 ntBASIC0.67□□□□□ -2.3
Cspg4Q8VHY0 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
Cspg4Q8VHY0 Gm15126-201ENSMUST00000118631 833 ntBASIC0.66□□□□□ -2.3
Cspg4Q8VHY0 Gm9703-201ENSMUST00000119573 343 ntBASIC0.66□□□□□ -2.3
Cspg4Q8VHY0 Gm14591-201ENSMUST00000120407 518 ntBASIC0.66□□□□□ -2.3
Cspg4Q8VHY0 Gm15381-201ENSMUST00000121501 1156 ntBASIC0.66□□□□□ -2.3
Cspg4Q8VHY0 Gm11965-201ENSMUST00000122017 277 ntBASIC0.66□□□□□ -2.3
Cspg4Q8VHY0 Gm23036-201ENSMUST00000157885 99 ntBASIC0.66□□□□□ -2.3
Cspg4Q8VHY0 Gm43250-201ENSMUST00000196536 273 ntBASIC0.66□□□□□ -2.3
Cspg4Q8VHY0 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC0.66□□□□□ -2.3
Cspg4Q8VHY0 AC164567.2-201ENSMUST00000219363 445 ntBASIC0.66□□□□□ -2.3
Cspg4Q8VHY0 AC125531.1-201ENSMUST00000219849 221 ntBASIC0.66□□□□□ -2.3
Cspg4Q8VHY0 Gm26168-201ENSMUST00000083787 112 ntBASIC0.66□□□□□ -2.3
Cspg4Q8VHY0 Gm17038-201ENSMUST00000166586 494 ntBASIC0.66□□□□□ -2.3
Cspg4Q8VHY0 Gm22131-201ENSMUST00000178415 94 ntBASIC0.66□□□□□ -2.3
Cspg4Q8VHY0 Gm27722-201ENSMUST00000183908 76 ntBASIC0.66□□□□□ -2.3
Cspg4Q8VHY0 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC0.66□□□□□ -2.3
Cspg4Q8VHY0 Gm43708-201ENSMUST00000198857 961 ntBASIC0.66□□□□□ -2.3
Cspg4Q8VHY0 Gm45590-201ENSMUST00000209715 262 ntBASIC0.66□□□□□ -2.3
Cspg4Q8VHY0 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
Cspg4Q8VHY0 Gm25560-201ENSMUST00000104606 176 ntBASIC0.65□□□□□ -2.3
Cspg4Q8VHY0 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC0.65□□□□□ -2.3
Cspg4Q8VHY0 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC0.65□□□□□ -2.3
Cspg4Q8VHY0 Gm22962-201ENSMUST00000157962 73 ntBASIC0.65□□□□□ -2.3
Cspg4Q8VHY0 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC0.65□□□□□ -2.3
Cspg4Q8VHY0 Gm29516-201ENSMUST00000190402 468 ntBASIC0.65□□□□□ -2.3
Cspg4Q8VHY0 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC0.65□□□□□ -2.3
Cspg4Q8VHY0 Gm44301-201ENSMUST00000200362 143 ntBASIC0.65□□□□□ -2.3
Cspg4Q8VHY0 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC0.65□□□□□ -2.3
Cspg4Q8VHY0 CT025538.2-201ENSMUST00000226083 772 ntBASIC0.65□□□□□ -2.3
Cspg4Q8VHY0 Gm23735-201ENSMUST00000082551 134 ntBASIC0.65□□□□□ -2.3
Cspg4Q8VHY0 Gm22829-201ENSMUST00000083771 106 ntBASIC0.65□□□□□ -2.3
Cspg4Q8VHY0 Olfr1160-201ENSMUST00000099839 960 ntBASIC0.65□□□□□ -2.3
Cspg4Q8VHY0 Gm12304-201ENSMUST00000120312 385 ntBASIC0.65□□□□□ -2.31
Cspg4Q8VHY0 Gm14363-201ENSMUST00000122304 409 ntBASIC0.65□□□□□ -2.31
Cspg4Q8VHY0 Gm13602-201ENSMUST00000122405 493 ntBASIC0.65□□□□□ -2.31
Cspg4Q8VHY0 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC0.65□□□□□ -2.31
Cspg4Q8VHY0 Gm24911-201ENSMUST00000157292 136 ntBASIC0.65□□□□□ -2.31
Cspg4Q8VHY0 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC0.65□□□□□ -2.31
Cspg4Q8VHY0 Gm22802-201ENSMUST00000175621 89 ntBASIC0.65□□□□□ -2.31
Cspg4Q8VHY0 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
Cspg4Q8VHY0 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC0.65□□□□□ -2.31
Cspg4Q8VHY0 Ighv12-1-201ENSMUST00000195542 329 ntBASIC0.65□□□□□ -2.31
Cspg4Q8VHY0 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
Cspg4Q8VHY0 Anp32-ps-201ENSMUST00000118265 388 ntBASIC0.64□□□□□ -2.31
Cspg4Q8VHY0 Gm14899-201ENSMUST00000118673 548 ntBASIC0.64□□□□□ -2.31
Cspg4Q8VHY0 Gm7346-201ENSMUST00000169661 476 ntBASIC0.64□□□□□ -2.31
Cspg4Q8VHY0 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC0.64□□□□□ -2.31
Cspg4Q8VHY0 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
Cspg4Q8VHY0 Gm20794-201ENSMUST00000177626 628 ntBASIC0.64□□□□□ -2.31
Cspg4Q8VHY0 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC0.64□□□□□ -2.31
Cspg4Q8VHY0 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC0.64□□□□□ -2.31
Cspg4Q8VHY0 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC0.64□□□□□ -2.31
Cspg4Q8VHY0 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
Cspg4Q8VHY0 Gm26378-201ENSMUST00000179093 107 ntBASIC0.64□□□□□ -2.31
Cspg4Q8VHY0 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
Cspg4Q8VHY0 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC0.64□□□□□ -2.31
Cspg4Q8VHY0 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC0.64□□□□□ -2.31
Cspg4Q8VHY0 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC0.64□□□□□ -2.31
Cspg4Q8VHY0 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC0.64□□□□□ -2.31
Cspg4Q8VHY0 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC0.64□□□□□ -2.31
Cspg4Q8VHY0 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC0.64□□□□□ -2.31
Cspg4Q8VHY0 Gm28356-202ENSMUST00000187566 858 ntBASIC0.64□□□□□ -2.31
Cspg4Q8VHY0 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
Cspg4Q8VHY0 Gm28191-201ENSMUST00000189112 211 ntBASIC0.64□□□□□ -2.31
Cspg4Q8VHY0 Gm20885-201ENSMUST00000190192 654 ntBASIC0.64□□□□□ -2.31
Cspg4Q8VHY0 Gm33571-201ENSMUST00000193271 657 ntBASIC0.64□□□□□ -2.31
Cspg4Q8VHY0 Gm36866-201ENSMUST00000193343 657 ntBASIC0.64□□□□□ -2.31
Cspg4Q8VHY0 Gm36047-201ENSMUST00000193659 657 ntBASIC0.64□□□□□ -2.31
Cspg4Q8VHY0 Gm37361-201ENSMUST00000194345 132 ntBASIC0.64□□□□□ -2.31
Cspg4Q8VHY0 Gm20857-201ENSMUST00000194766 657 ntBASIC0.64□□□□□ -2.31
Cspg4Q8VHY0 Gm20858-201ENSMUST00000195459 657 ntBASIC0.64□□□□□ -2.31
Cspg4Q8VHY0 Gm30638-201ENSMUST00000195570 656 ntBASIC0.64□□□□□ -2.31
Cspg4Q8VHY0 Gm45386-201ENSMUST00000210194 218 ntBASIC0.64□□□□□ -2.31
Cspg4Q8VHY0 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC0.64□□□□□ -2.31
Cspg4Q8VHY0 Gm36989-201ENSMUST00000193225 2160 ntBASIC0.64□□□□□ -2.31
Cspg4Q8VHY0 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC0.64□□□□□ -2.31
Cspg4Q8VHY0 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC0.64□□□□□ -2.31
Cspg4Q8VHY0 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
Cspg4Q8VHY0 Gm24805-201ENSMUST00000082931 104 ntBASIC0.64□□□□□ -2.31
Cspg4Q8VHY0 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC0.63□□□□□ -2.31
Cspg4Q8VHY0 Gm14674-201ENSMUST00000117816 342 ntBASIC0.63□□□□□ -2.31
Cspg4Q8VHY0 Gm15037-201ENSMUST00000120358 259 ntBASIC0.63□□□□□ -2.31
Cspg4Q8VHY0 Gm14840-201ENSMUST00000122135 594 ntBASIC0.63□□□□□ -2.31
Cspg4Q8VHY0 Gm22560-201ENSMUST00000157332 120 ntBASIC0.63□□□□□ -2.31
Cspg4Q8VHY0 Gm26157-201ENSMUST00000158974 126 ntBASIC0.63□□□□□ -2.31
Cspg4Q8VHY0 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
Cspg4Q8VHY0 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.63□□□□□ -2.31
Cspg4Q8VHY0 Gm31511-201ENSMUST00000193134 657 ntBASIC0.63□□□□□ -2.31
Cspg4Q8VHY0 Gm2446-201ENSMUST00000220144 772 ntBASIC0.63□□□□□ -2.31
Cspg4Q8VHY0 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
Cspg4Q8VHY0 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms