Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CopaQ8CIE6 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CopaQ8CIE6 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
CopaQ8CIE6 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
CopaQ8CIE6 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
CopaQ8CIE6 Gm22021-201ENSMUST00000104353 107 ntBASIC3.27□□□□□ -1.89
CopaQ8CIE6 Gm11065-201ENSMUST00000111462 228 ntBASIC3.27□□□□□ -1.89
CopaQ8CIE6 Gm14593-201ENSMUST00000119948 294 ntBASIC3.27□□□□□ -1.89
CopaQ8CIE6 Gm23184-201ENSMUST00000122594 131 ntBASIC3.27□□□□□ -1.89
CopaQ8CIE6 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.27□□□□□ -1.89
CopaQ8CIE6 Gm24914-201ENSMUST00000157285 313 ntBASIC3.27□□□□□ -1.89
CopaQ8CIE6 Gm17062-201ENSMUST00000166987 461 ntBASIC3.27□□□□□ -1.89
CopaQ8CIE6 Gm7953-201ENSMUST00000168278 469 ntBASIC3.27□□□□□ -1.89
CopaQ8CIE6 Gm28002-201ENSMUST00000184832 100 ntBASIC3.27□□□□□ -1.89
CopaQ8CIE6 Gm34073-201ENSMUST00000195736 212 ntBASIC3.27□□□□□ -1.89
CopaQ8CIE6 Gm18453-201ENSMUST00000208000 626 ntBASIC3.27□□□□□ -1.89
CopaQ8CIE6 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.27□□□□□ -1.89
CopaQ8CIE6 CT485612.4-201ENSMUST00000223405 250 ntBASIC3.27□□□□□ -1.89
CopaQ8CIE6 Gm23970-201ENSMUST00000083319 107 ntBASIC3.27□□□□□ -1.89
CopaQ8CIE6 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
CopaQ8CIE6 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CopaQ8CIE6 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CopaQ8CIE6 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.26□□□□□ -1.89
CopaQ8CIE6 Gm24119-201ENSMUST00000103979 246 ntBASIC3.26□□□□□ -1.89
CopaQ8CIE6 Gm25168-201ENSMUST00000104189 132 ntBASIC3.26□□□□□ -1.89
CopaQ8CIE6 Gm14069-201ENSMUST00000120815 229 ntBASIC3.26□□□□□ -1.89
CopaQ8CIE6 Gm14629-201ENSMUST00000122428 144 ntBASIC3.26□□□□□ -1.89
CopaQ8CIE6 Gm24885-201ENSMUST00000158783 270 ntBASIC3.26□□□□□ -1.89
CopaQ8CIE6 Gm16038-201ENSMUST00000159317 193 ntBASIC3.26□□□□□ -1.89
CopaQ8CIE6 Gm20462-201ENSMUST00000172623 408 ntBASIC3.26□□□□□ -1.89
CopaQ8CIE6 Gm24819-201ENSMUST00000175094 166 ntBASIC3.26□□□□□ -1.89
CopaQ8CIE6 Mir3106-201ENSMUST00000175401 82 ntBASIC3.26□□□□□ -1.89
CopaQ8CIE6 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC3.26□□□□□ -1.89
CopaQ8CIE6 Gm28418-201ENSMUST00000186179 423 ntBASIC3.26□□□□□ -1.89
CopaQ8CIE6 Gm7837-201ENSMUST00000190873 412 ntBASIC3.26□□□□□ -1.89
CopaQ8CIE6 Ighv2-8-201ENSMUST00000193935 262 ntBASIC3.26□□□□□ -1.89
CopaQ8CIE6 Gm37404-201ENSMUST00000195726 359 ntBASIC3.26□□□□□ -1.89
CopaQ8CIE6 Gm9402-201ENSMUST00000196849 388 ntBASIC3.26□□□□□ -1.89
CopaQ8CIE6 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC3.26□□□□□ -1.89
CopaQ8CIE6 Igkv1-136-201ENSMUST00000200635 297 ntBASIC3.26□□□□□ -1.89
CopaQ8CIE6 Gm19252-201ENSMUST00000204705 305 ntBASIC3.26□□□□□ -1.89
CopaQ8CIE6 Gm44519-201ENSMUST00000206486 122 ntBASIC3.26□□□□□ -1.89
CopaQ8CIE6 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.26□□□□□ -1.89
CopaQ8CIE6 Gm25801-201ENSMUST00000082638 106 ntBASIC3.26□□□□□ -1.89
CopaQ8CIE6 Gm25698-201ENSMUST00000082897 107 ntBASIC3.26□□□□□ -1.89
CopaQ8CIE6 Gm26164-201ENSMUST00000083793 104 ntBASIC3.26□□□□□ -1.89
CopaQ8CIE6 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.26□□□□□ -1.89
CopaQ8CIE6 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CopaQ8CIE6 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CopaQ8CIE6 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CopaQ8CIE6 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CopaQ8CIE6 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.25□□□□□ -1.89
CopaQ8CIE6 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
CopaQ8CIE6 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CopaQ8CIE6 Gm14551-201ENSMUST00000120802 256 ntBASIC3.25□□□□□ -1.89
CopaQ8CIE6 Gm23791-201ENSMUST00000122553 293 ntBASIC3.25□□□□□ -1.89
CopaQ8CIE6 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC3.25□□□□□ -1.89
CopaQ8CIE6 Gm22037-201ENSMUST00000157280 296 ntBASIC3.25□□□□□ -1.89
CopaQ8CIE6 Gm24138-201ENSMUST00000157572 114 ntBASIC3.25□□□□□ -1.89
CopaQ8CIE6 Gm23557-201ENSMUST00000157820 138 ntBASIC3.25□□□□□ -1.89
CopaQ8CIE6 Gm22328-201ENSMUST00000158074 112 ntBASIC3.25□□□□□ -1.89
CopaQ8CIE6 Gm26402-201ENSMUST00000158499 113 ntBASIC3.25□□□□□ -1.89
CopaQ8CIE6 Gm22435-201ENSMUST00000158552 128 ntBASIC3.25□□□□□ -1.89
CopaQ8CIE6 Mir6993-201ENSMUST00000184912 65 ntBASIC3.25□□□□□ -1.89
CopaQ8CIE6 Ighv1-28-201ENSMUST00000192987 351 ntBASIC3.25□□□□□ -1.89
CopaQ8CIE6 Igkv15-97-201ENSMUST00000197637 339 ntBASIC3.25□□□□□ -1.89
CopaQ8CIE6 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC3.25□□□□□ -1.89
CopaQ8CIE6 Gm23345-201ENSMUST00000083817 150 ntBASIC3.25□□□□□ -1.89
CopaQ8CIE6 AC153526.2-201ENSMUST00000218206 2031 ntBASIC3.25□□□□□ -1.89
CopaQ8CIE6 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CopaQ8CIE6 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
CopaQ8CIE6 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CopaQ8CIE6 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CopaQ8CIE6 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CopaQ8CIE6 Gm15190-201ENSMUST00000120855 276 ntBASIC3.24□□□□□ -1.89
CopaQ8CIE6 Gm23213-201ENSMUST00000122715 313 ntBASIC3.24□□□□□ -1.89
CopaQ8CIE6 Gm22534-201ENSMUST00000158173 104 ntBASIC3.24□□□□□ -1.89
CopaQ8CIE6 Gm23196-201ENSMUST00000158806 107 ntBASIC3.24□□□□□ -1.89
CopaQ8CIE6 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
CopaQ8CIE6 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CopaQ8CIE6 Gm27640-201ENSMUST00000184580 147 ntBASIC3.24□□□□□ -1.89
CopaQ8CIE6 Gm38238-201ENSMUST00000194334 346 ntBASIC3.24□□□□□ -1.89
CopaQ8CIE6 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC3.24□□□□□ -1.89
CopaQ8CIE6 Gm6615-201ENSMUST00000199426 631 ntBASIC3.24□□□□□ -1.89
CopaQ8CIE6 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CopaQ8CIE6 Gm44600-201ENSMUST00000208540 111 ntBASIC3.24□□□□□ -1.89
CopaQ8CIE6 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.24□□□□□ -1.89
CopaQ8CIE6 Gm45815-201ENSMUST00000220241 146 ntBASIC3.24□□□□□ -1.89
CopaQ8CIE6 AC130821.1-201ENSMUST00000221997 293 ntBASIC3.24□□□□□ -1.89
CopaQ8CIE6 AC154521.1-201ENSMUST00000222635 330 ntBASIC3.24□□□□□ -1.89
CopaQ8CIE6 AC125311.1-201ENSMUST00000226950 220 ntBASIC3.24□□□□□ -1.89
CopaQ8CIE6 Gm23136-201ENSMUST00000083425 99 ntBASIC3.24□□□□□ -1.89
CopaQ8CIE6 Gm26166-201ENSMUST00000083788 107 ntBASIC3.24□□□□□ -1.89
CopaQ8CIE6 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
CopaQ8CIE6 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
CopaQ8CIE6 Gm43889-201ENSMUST00000203950 3681 ntBASIC3.24□□□□□ -1.89
CopaQ8CIE6 AC154481.2-201ENSMUST00000222526 3175 ntBASIC3.24□□□□□ -1.89
CopaQ8CIE6 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
CopaQ8CIE6 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CopaQ8CIE6 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 135 ms