Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC2.59□□□□□ -1.99
Ccdc28bQ8CEG5 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC2.59□□□□□ -1.99
Ccdc28bQ8CEG5 AC163295.1-201ENSMUST00000227840 314 ntBASIC2.59□□□□□ -1.99
Ccdc28bQ8CEG5 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Ccdc28bQ8CEG5 Gm23378-201ENSMUST00000082942 107 ntBASIC2.59□□□□□ -1.99
Ccdc28bQ8CEG5 Olfr575-201ENSMUST00000084812 957 ntBASIC2.59□□□□□ -1.99
Ccdc28bQ8CEG5 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Ccdc28bQ8CEG5 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Ccdc28bQ8CEG5 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC2.58□□□□□ -2
Ccdc28bQ8CEG5 n-R5s216-201ENSMUST00000122755 112 ntBASIC2.58□□□□□ -2
Ccdc28bQ8CEG5 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC2.58□□□□□ -2
Ccdc28bQ8CEG5 Gm16354-201ENSMUST00000155376 150 ntBASIC2.58□□□□□ -2
Ccdc28bQ8CEG5 Gm26411-201ENSMUST00000157668 107 ntBASIC2.58□□□□□ -2
Ccdc28bQ8CEG5 Gm22534-201ENSMUST00000158173 104 ntBASIC2.58□□□□□ -2
Ccdc28bQ8CEG5 Gm18520-201ENSMUST00000174783 658 ntBASIC2.58□□□□□ -2
Ccdc28bQ8CEG5 Gm26180-201ENSMUST00000179942 107 ntBASIC2.58□□□□□ -2
Ccdc28bQ8CEG5 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC2.58□□□□□ -2
Ccdc28bQ8CEG5 Gm7858-201ENSMUST00000190177 622 ntBASIC2.58□□□□□ -2
Ccdc28bQ8CEG5 Gm43626-201ENSMUST00000198575 162 ntBASIC2.58□□□□□ -2
Ccdc28bQ8CEG5 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.58□□□□□ -2
Ccdc28bQ8CEG5 Gm44825-201ENSMUST00000207557 150 ntBASIC2.58□□□□□ -2
Ccdc28bQ8CEG5 Gm44598-201ENSMUST00000207566 150 ntBASIC2.58□□□□□ -2
Ccdc28bQ8CEG5 Gm7948-201ENSMUST00000212607 844 ntBASIC2.58□□□□□ -2
Ccdc28bQ8CEG5 Gm7692-201ENSMUST00000213534 409 ntBASIC2.58□□□□□ -2
Ccdc28bQ8CEG5 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC2.58□□□□□ -2
Ccdc28bQ8CEG5 AC155923.1-201ENSMUST00000215676 356 ntBASIC2.58□□□□□ -2
Ccdc28bQ8CEG5 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.58□□□□□ -2
Ccdc28bQ8CEG5 Gm5023-201ENSMUST00000217442 587 ntBASIC2.58□□□□□ -2
Ccdc28bQ8CEG5 AC164567.2-201ENSMUST00000219363 445 ntBASIC2.58□□□□□ -2
Ccdc28bQ8CEG5 Gm19326-201ENSMUST00000219818 326 ntBASIC2.58□□□□□ -2
Ccdc28bQ8CEG5 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.58□□□□□ -2
Ccdc28bQ8CEG5 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Ccdc28bQ8CEG5 Gm37642-201ENSMUST00000193166 1735 ntBASIC2.57□□□□□ -2
Ccdc28bQ8CEG5 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Ccdc28bQ8CEG5 Gm23422-201ENSMUST00000102000 107 ntBASIC2.57□□□□□ -2
Ccdc28bQ8CEG5 Gm25764-201ENSMUST00000104092 134 ntBASIC2.57□□□□□ -2
Ccdc28bQ8CEG5 Gm13085-201ENSMUST00000118356 171 ntBASIC2.57□□□□□ -2
Ccdc28bQ8CEG5 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC2.57□□□□□ -2
Ccdc28bQ8CEG5 Gm25107-201ENSMUST00000122472 129 ntBASIC2.57□□□□□ -2
Ccdc28bQ8CEG5 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC2.57□□□□□ -2
Ccdc28bQ8CEG5 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.57□□□□□ -2
Ccdc28bQ8CEG5 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC2.57□□□□□ -2
Ccdc28bQ8CEG5 Gm22791-201ENSMUST00000157232 145 ntBASIC2.57□□□□□ -2
Ccdc28bQ8CEG5 Gm22098-201ENSMUST00000157930 85 ntBASIC2.57□□□□□ -2
Ccdc28bQ8CEG5 Gm26402-201ENSMUST00000158499 113 ntBASIC2.57□□□□□ -2
Ccdc28bQ8CEG5 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.57□□□□□ -2
Ccdc28bQ8CEG5 Mir5099-201ENSMUST00000175257 74 ntBASIC2.57□□□□□ -2
Ccdc28bQ8CEG5 Gm23660-201ENSMUST00000178362 79 ntBASIC2.57□□□□□ -2
Ccdc28bQ8CEG5 Gm24088-201ENSMUST00000179100 79 ntBASIC2.57□□□□□ -2
Ccdc28bQ8CEG5 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC2.57□□□□□ -2
Ccdc28bQ8CEG5 Gm29352-201ENSMUST00000188054 544 ntBASIC2.57□□□□□ -2
Ccdc28bQ8CEG5 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC2.57□□□□□ -2
Ccdc28bQ8CEG5 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.57□□□□□ -2
Ccdc28bQ8CEG5 Gm37029-201ENSMUST00000195773 239 ntBASIC2.57□□□□□ -2
Ccdc28bQ8CEG5 Gm43722-201ENSMUST00000196054 124 ntBASIC2.57□□□□□ -2
Ccdc28bQ8CEG5 Mir7232-201ENSMUST00000197929 74 ntBASIC2.57□□□□□ -2
Ccdc28bQ8CEG5 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.57□□□□□ -2
Ccdc28bQ8CEG5 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC2.57□□□□□ -2
Ccdc28bQ8CEG5 Gm43955-201ENSMUST00000204332 142 ntBASIC2.57□□□□□ -2
Ccdc28bQ8CEG5 Gm44657-201ENSMUST00000208568 450 ntBASIC2.57□□□□□ -2
Ccdc28bQ8CEG5 Gm44594-201ENSMUST00000208982 407 ntBASIC2.57□□□□□ -2
Ccdc28bQ8CEG5 Gm45375-201ENSMUST00000210338 280 ntBASIC2.57□□□□□ -2
Ccdc28bQ8CEG5 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Ccdc28bQ8CEG5 Gm45860-201ENSMUST00000212700 334 ntBASIC2.57□□□□□ -2
Ccdc28bQ8CEG5 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.57□□□□□ -2
Ccdc28bQ8CEG5 CT009718.4-201ENSMUST00000221881 109 ntBASIC2.57□□□□□ -2
Ccdc28bQ8CEG5 AC241593.1-201ENSMUST00000224768 397 ntBASIC2.57□□□□□ -2
Ccdc28bQ8CEG5 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
Ccdc28bQ8CEG5 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Ccdc28bQ8CEG5 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Ccdc28bQ8CEG5 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Ccdc28bQ8CEG5 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.56□□□□□ -2
Ccdc28bQ8CEG5 Gm19428-201ENSMUST00000220512 1995 ntBASIC2.56□□□□□ -2
Ccdc28bQ8CEG5 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.56□□□□□ -2
Ccdc28bQ8CEG5 Mir759-201ENSMUST00000103254 98 ntBASIC2.56□□□□□ -2
Ccdc28bQ8CEG5 Gm22676-201ENSMUST00000116972 129 ntBASIC2.56□□□□□ -2
Ccdc28bQ8CEG5 Gm7164-201ENSMUST00000117503 450 ntBASIC2.56□□□□□ -2
Ccdc28bQ8CEG5 Gm14940-201ENSMUST00000119309 495 ntBASIC2.56□□□□□ -2
Ccdc28bQ8CEG5 Gm15223-201ENSMUST00000120989 826 ntBASIC2.56□□□□□ -2
Ccdc28bQ8CEG5 Gm14980-201ENSMUST00000121247 736 ntBASIC2.56□□□□□ -2
Ccdc28bQ8CEG5 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC2.56□□□□□ -2
Ccdc28bQ8CEG5 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC2.56□□□□□ -2
Ccdc28bQ8CEG5 Gm22322-201ENSMUST00000157151 111 ntBASIC2.56□□□□□ -2
Ccdc28bQ8CEG5 Gm22257-201ENSMUST00000158687 301 ntBASIC2.56□□□□□ -2
Ccdc28bQ8CEG5 Gm22668-201ENSMUST00000158716 260 ntBASIC2.56□□□□□ -2
Ccdc28bQ8CEG5 Gm23476-201ENSMUST00000158881 274 ntBASIC2.56□□□□□ -2
Ccdc28bQ8CEG5 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC2.56□□□□□ -2
Ccdc28bQ8CEG5 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC2.56□□□□□ -2
Ccdc28bQ8CEG5 Gm28755-201ENSMUST00000185773 199 ntBASIC2.56□□□□□ -2
Ccdc28bQ8CEG5 Gm7329-201ENSMUST00000185915 210 ntBASIC2.56□□□□□ -2
Ccdc28bQ8CEG5 Gm29429-201ENSMUST00000187071 121 ntBASIC2.56□□□□□ -2
Ccdc28bQ8CEG5 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC2.56□□□□□ -2
Ccdc28bQ8CEG5 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC2.56□□□□□ -2
Ccdc28bQ8CEG5 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.56□□□□□ -2
Ccdc28bQ8CEG5 AC124489.2-201ENSMUST00000223930 589 ntBASIC2.56□□□□□ -2
Ccdc28bQ8CEG5 AC158395.1-201ENSMUST00000227206 452 ntBASIC2.56□□□□□ -2
Ccdc28bQ8CEG5 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Ccdc28bQ8CEG5 mt-Td-201ENSMUST00000082404 70 ntBASIC2.56□□□□□ -2
Ccdc28bQ8CEG5 Snord42a-201ENSMUST00000082606 65 ntBASIC2.56□□□□□ -2
Ccdc28bQ8CEG5 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms