Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm18000-201ENSMUST00000212153 800 ntBASIC2.93□□□□□ -1.94
Nup88Q8CEC0 AC167192.2-201ENSMUST00000224794 198 ntBASIC2.93□□□□□ -1.94
Nup88Q8CEC0 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Nup88Q8CEC0 Olfr575-201ENSMUST00000084812 957 ntBASIC2.93□□□□□ -1.94
Nup88Q8CEC0 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Nup88Q8CEC0 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Nup88Q8CEC0 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Nup88Q8CEC0 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Nup88Q8CEC0 Gm22750-201ENSMUST00000102076 103 ntBASIC2.92□□□□□ -1.94
Nup88Q8CEC0 Mir878-201ENSMUST00000104680 78 ntBASIC2.92□□□□□ -1.94
Nup88Q8CEC0 Gm12779-201ENSMUST00000121496 143 ntBASIC2.92□□□□□ -1.94
Nup88Q8CEC0 Gm23588-201ENSMUST00000157659 99 ntBASIC2.92□□□□□ -1.94
Nup88Q8CEC0 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC2.92□□□□□ -1.94
Nup88Q8CEC0 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.92□□□□□ -1.94
Nup88Q8CEC0 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Nup88Q8CEC0 Gm5224-201ENSMUST00000183060 350 ntBASIC2.92□□□□□ -1.94
Nup88Q8CEC0 Mir6341-201ENSMUST00000183490 121 ntBASIC2.92□□□□□ -1.94
Nup88Q8CEC0 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.92□□□□□ -1.94
Nup88Q8CEC0 Gm29597-201ENSMUST00000188035 308 ntBASIC2.92□□□□□ -1.94
Nup88Q8CEC0 Gm9236-201ENSMUST00000196892 587 ntBASIC2.92□□□□□ -1.94
Nup88Q8CEC0 Gm42818-201ENSMUST00000198869 987 ntBASIC2.92□□□□□ -1.94
Nup88Q8CEC0 Gm43550-201ENSMUST00000200597 303 ntBASIC2.92□□□□□ -1.94
Nup88Q8CEC0 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Nup88Q8CEC0 Gm45252-201ENSMUST00000211579 397 ntBASIC2.92□□□□□ -1.94
Nup88Q8CEC0 AC115735.3-201ENSMUST00000227757 513 ntBASIC2.92□□□□□ -1.94
Nup88Q8CEC0 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Nup88Q8CEC0 Gm10298-201ENSMUST00000074801 265 ntBASIC2.92□□□□□ -1.94
Nup88Q8CEC0 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Nup88Q8CEC0 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
Nup88Q8CEC0 AC122887.2-201ENSMUST00000219465 1603 ntBASIC2.91□□□□□ -1.94
Nup88Q8CEC0 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC2.91□□□□□ -1.94
Nup88Q8CEC0 Gm24126-201ENSMUST00000104111 106 ntBASIC2.91□□□□□ -1.94
Nup88Q8CEC0 Gm24670-201ENSMUST00000104154 132 ntBASIC2.91□□□□□ -1.94
Nup88Q8CEC0 Gm25529-201ENSMUST00000104850 92 ntBASIC2.91□□□□□ -1.94
Nup88Q8CEC0 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Nup88Q8CEC0 Gm15443-201ENSMUST00000118947 820 ntBASIC2.91□□□□□ -1.94
Nup88Q8CEC0 Gm26099-201ENSMUST00000157248 109 ntBASIC2.91□□□□□ -1.94
Nup88Q8CEC0 Gm24075-201ENSMUST00000158175 72 ntBASIC2.91□□□□□ -1.94
Nup88Q8CEC0 Gm17062-201ENSMUST00000166987 461 ntBASIC2.91□□□□□ -1.94
Nup88Q8CEC0 Gm24418-201ENSMUST00000177597 79 ntBASIC2.91□□□□□ -1.94
Nup88Q8CEC0 Gm23933-201ENSMUST00000178405 79 ntBASIC2.91□□□□□ -1.94
Nup88Q8CEC0 Gm24639-201ENSMUST00000178518 79 ntBASIC2.91□□□□□ -1.94
Nup88Q8CEC0 Gm23076-201ENSMUST00000179082 79 ntBASIC2.91□□□□□ -1.94
Nup88Q8CEC0 Gm25077-201ENSMUST00000179157 79 ntBASIC2.91□□□□□ -1.94
Nup88Q8CEC0 Gm43708-201ENSMUST00000198857 961 ntBASIC2.91□□□□□ -1.94
Nup88Q8CEC0 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC2.91□□□□□ -1.94
Nup88Q8CEC0 Gm18854-201ENSMUST00000211196 329 ntBASIC2.91□□□□□ -1.94
Nup88Q8CEC0 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Nup88Q8CEC0 AC122225.1-201ENSMUST00000215641 369 ntBASIC2.91□□□□□ -1.94
Nup88Q8CEC0 AC069561.2-201ENSMUST00000217596 420 ntBASIC2.91□□□□□ -1.94
Nup88Q8CEC0 AC124346.1-201ENSMUST00000218539 364 ntBASIC2.91□□□□□ -1.94
Nup88Q8CEC0 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Nup88Q8CEC0 Gm23454-201ENSMUST00000083332 133 ntBASIC2.91□□□□□ -1.94
Nup88Q8CEC0 Mir10a-201ENSMUST00000083585 110 ntBASIC2.91□□□□□ -1.94
Nup88Q8CEC0 Gm12433-201ENSMUST00000119659 255 ntBASIC2.9□□□□□ -1.95
Nup88Q8CEC0 Gm12213-201ENSMUST00000119924 353 ntBASIC2.9□□□□□ -1.95
Nup88Q8CEC0 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC2.9□□□□□ -1.95
Nup88Q8CEC0 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.95
Nup88Q8CEC0 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC2.9□□□□□ -1.95
Nup88Q8CEC0 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC2.9□□□□□ -1.95
Nup88Q8CEC0 Gm22534-201ENSMUST00000158173 104 ntBASIC2.9□□□□□ -1.95
Nup88Q8CEC0 Gm4468-201ENSMUST00000170206 294 ntBASIC2.9□□□□□ -1.95
Nup88Q8CEC0 Gm20689-201ENSMUST00000176033 279 ntBASIC2.9□□□□□ -1.95
Nup88Q8CEC0 Gm44524-201ENSMUST00000203899 271 ntBASIC2.9□□□□□ -1.95
Nup88Q8CEC0 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC2.9□□□□□ -1.95
Nup88Q8CEC0 Gm45879-201ENSMUST00000212521 392 ntBASIC2.9□□□□□ -1.95
Nup88Q8CEC0 Gm18696-201ENSMUST00000220103 274 ntBASIC2.9□□□□□ -1.95
Nup88Q8CEC0 AC164297.5-201ENSMUST00000224365 198 ntBASIC2.9□□□□□ -1.95
Nup88Q8CEC0 CT025603.4-201ENSMUST00000225777 413 ntBASIC2.9□□□□□ -1.95
Nup88Q8CEC0 AC162857.1-201ENSMUST00000226614 400 ntBASIC2.9□□□□□ -1.95
Nup88Q8CEC0 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Nup88Q8CEC0 Gm23727-201ENSMUST00000083352 164 ntBASIC2.9□□□□□ -1.95
Nup88Q8CEC0 Gm26166-201ENSMUST00000083788 107 ntBASIC2.9□□□□□ -1.95
Nup88Q8CEC0 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.95
Nup88Q8CEC0 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC2.89□□□□□ -1.95
Nup88Q8CEC0 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
Nup88Q8CEC0 Gm15714-201ENSMUST00000117168 250 ntBASIC2.89□□□□□ -1.95
Nup88Q8CEC0 Gm14392-201ENSMUST00000120332 401 ntBASIC2.89□□□□□ -1.95
Nup88Q8CEC0 Gm14413-201ENSMUST00000122158 408 ntBASIC2.89□□□□□ -1.95
Nup88Q8CEC0 Gm23889-201ENSMUST00000122689 104 ntBASIC2.89□□□□□ -1.95
Nup88Q8CEC0 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.89□□□□□ -1.95
Nup88Q8CEC0 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.89□□□□□ -1.95
Nup88Q8CEC0 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.89□□□□□ -1.95
Nup88Q8CEC0 Gm17072-201ENSMUST00000166673 658 ntBASIC2.89□□□□□ -1.95
Nup88Q8CEC0 Gm23725-201ENSMUST00000177876 107 ntBASIC2.89□□□□□ -1.95
Nup88Q8CEC0 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC2.89□□□□□ -1.95
Nup88Q8CEC0 Gm5329-201ENSMUST00000186898 463 ntBASIC2.89□□□□□ -1.95
Nup88Q8CEC0 Gm28647-201ENSMUST00000188416 197 ntBASIC2.89□□□□□ -1.95
Nup88Q8CEC0 Gm29184-201ENSMUST00000190038 334 ntBASIC2.89□□□□□ -1.95
Nup88Q8CEC0 Gm37455-201ENSMUST00000191993 529 ntBASIC2.89□□□□□ -1.95
Nup88Q8CEC0 Gm9227-201ENSMUST00000194733 566 ntBASIC2.89□□□□□ -1.95
Nup88Q8CEC0 Gm42622-201ENSMUST00000197229 355 ntBASIC2.89□□□□□ -1.95
Nup88Q8CEC0 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC2.89□□□□□ -1.95
Nup88Q8CEC0 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
Nup88Q8CEC0 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC2.89□□□□□ -1.95
Nup88Q8CEC0 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.89□□□□□ -1.95
Nup88Q8CEC0 AC123860.1-201ENSMUST00000228033 481 ntBASIC2.89□□□□□ -1.95
Nup88Q8CEC0 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Nup88Q8CEC0 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
Nup88Q8CEC0 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms