Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.24□□□□□ -2.21
Alx1Q8C8B0 Gm14428-201ENSMUST00000120408 822 ntBASIC1.23□□□□□ -2.21
Alx1Q8C8B0 Gm6956-201ENSMUST00000134724 546 ntBASIC1.23□□□□□ -2.21
Alx1Q8C8B0 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC1.23□□□□□ -2.21
Alx1Q8C8B0 Gm24942-201ENSMUST00000158328 114 ntBASIC1.23□□□□□ -2.21
Alx1Q8C8B0 Gm22663-201ENSMUST00000158721 102 ntBASIC1.23□□□□□ -2.21
Alx1Q8C8B0 Gm26195-201ENSMUST00000175035 101 ntBASIC1.23□□□□□ -2.21
Alx1Q8C8B0 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC1.23□□□□□ -2.21
Alx1Q8C8B0 Gm18268-201ENSMUST00000208445 943 ntBASIC1.23□□□□□ -2.21
Alx1Q8C8B0 AC111046.1-201ENSMUST00000217715 412 ntBASIC1.23□□□□□ -2.21
Alx1Q8C8B0 AC158388.1-201ENSMUST00000225441 256 ntBASIC1.23□□□□□ -2.21
Alx1Q8C8B0 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC1.23□□□□□ -2.21
Alx1Q8C8B0 Gm23939-201ENSMUST00000082880 133 ntBASIC1.23□□□□□ -2.21
Alx1Q8C8B0 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Alx1Q8C8B0 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Alx1Q8C8B0 Gm15176-201ENSMUST00000117734 135 ntBASIC1.22□□□□□ -2.21
Alx1Q8C8B0 Gm14677-201ENSMUST00000117866 486 ntBASIC1.22□□□□□ -2.21
Alx1Q8C8B0 Gm25637-201ENSMUST00000157529 107 ntBASIC1.22□□□□□ -2.21
Alx1Q8C8B0 Gm23760-201ENSMUST00000158350 116 ntBASIC1.22□□□□□ -2.21
Alx1Q8C8B0 Gm7953-201ENSMUST00000168278 469 ntBASIC1.22□□□□□ -2.21
Alx1Q8C8B0 Mir3473a-201ENSMUST00000175011 78 ntBASIC1.22□□□□□ -2.21
Alx1Q8C8B0 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC1.22□□□□□ -2.21
Alx1Q8C8B0 Gm25820-201ENSMUST00000198589 127 ntBASIC1.22□□□□□ -2.21
Alx1Q8C8B0 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.22□□□□□ -2.21
Alx1Q8C8B0 AC133076.1-201ENSMUST00000228074 484 ntBASIC1.22□□□□□ -2.21
Alx1Q8C8B0 Gm14566-201ENSMUST00000118915 321 ntBASIC1.21□□□□□ -2.22
Alx1Q8C8B0 Gm12096-201ENSMUST00000121149 829 ntBASIC1.21□□□□□ -2.22
Alx1Q8C8B0 Gm14366-201ENSMUST00000121970 730 ntBASIC1.21□□□□□ -2.22
Alx1Q8C8B0 Gm24840-201ENSMUST00000122603 147 ntBASIC1.21□□□□□ -2.22
Alx1Q8C8B0 Gm25283-201ENSMUST00000157272 77 ntBASIC1.21□□□□□ -2.22
Alx1Q8C8B0 Gm22217-201ENSMUST00000157556 313 ntBASIC1.21□□□□□ -2.22
Alx1Q8C8B0 Gm25666-201ENSMUST00000157702 107 ntBASIC1.21□□□□□ -2.22
Alx1Q8C8B0 Gm25333-201ENSMUST00000158035 246 ntBASIC1.21□□□□□ -2.22
Alx1Q8C8B0 Gm25768-201ENSMUST00000158570 98 ntBASIC1.21□□□□□ -2.22
Alx1Q8C8B0 Gm24677-201ENSMUST00000158755 150 ntBASIC1.21□□□□□ -2.22
Alx1Q8C8B0 Gm22776-201ENSMUST00000178634 94 ntBASIC1.21□□□□□ -2.22
Alx1Q8C8B0 Gm23767-201ENSMUST00000179278 94 ntBASIC1.21□□□□□ -2.22
Alx1Q8C8B0 Gm29231-201ENSMUST00000179850 319 ntBASIC1.21□□□□□ -2.22
Alx1Q8C8B0 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.21□□□□□ -2.22
Alx1Q8C8B0 Gm29167-201ENSMUST00000190024 377 ntBASIC1.21□□□□□ -2.22
Alx1Q8C8B0 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC1.21□□□□□ -2.22
Alx1Q8C8B0 Gm37029-201ENSMUST00000195773 239 ntBASIC1.21□□□□□ -2.22
Alx1Q8C8B0 Gm45636-201ENSMUST00000210497 1064 ntBASIC1.21□□□□□ -2.22
Alx1Q8C8B0 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC1.21□□□□□ -2.22
Alx1Q8C8B0 AC159246.1-201ENSMUST00000214478 249 ntBASIC1.21□□□□□ -2.22
Alx1Q8C8B0 AC163357.1-201ENSMUST00000220847 233 ntBASIC1.21□□□□□ -2.22
Alx1Q8C8B0 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.21□□□□□ -2.22
Alx1Q8C8B0 Mir29c-201ENSMUST00000083614 88 ntBASIC1.21□□□□□ -2.22
Alx1Q8C8B0 Gm22228-201ENSMUST00000157364 101 ntBASIC1.2□□□□□ -2.22
Alx1Q8C8B0 Gm22537-201ENSMUST00000158172 199 ntBASIC1.2□□□□□ -2.22
Alx1Q8C8B0 Gm24056-201ENSMUST00000158617 146 ntBASIC1.2□□□□□ -2.22
Alx1Q8C8B0 Ear-ps8-201ENSMUST00000161935 354 ntBASIC1.2□□□□□ -2.22
Alx1Q8C8B0 Adgrg4-206ENSMUST00000168724 531 ntBASIC1.2□□□□□ -2.22
Alx1Q8C8B0 Gm42739-201ENSMUST00000200687 226 ntBASIC1.2□□□□□ -2.22
Alx1Q8C8B0 AC173482.2-201ENSMUST00000224044 750 ntBASIC1.2□□□□□ -2.22
Alx1Q8C8B0 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
Alx1Q8C8B0 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC1.2□□□□□ -2.22
Alx1Q8C8B0 Gm26493-201ENSMUST00000083155 136 ntBASIC1.2□□□□□ -2.22
Alx1Q8C8B0 Mir196b-201ENSMUST00000083509 85 ntBASIC1.2□□□□□ -2.22
Alx1Q8C8B0 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Alx1Q8C8B0 Gm23705-201ENSMUST00000104370 130 ntBASIC1.19□□□□□ -2.22
Alx1Q8C8B0 Gm12550-201ENSMUST00000118478 329 ntBASIC1.19□□□□□ -2.22
Alx1Q8C8B0 Gm6664-201ENSMUST00000119138 468 ntBASIC1.19□□□□□ -2.22
Alx1Q8C8B0 Gm14731-201ENSMUST00000119216 376 ntBASIC1.19□□□□□ -2.22
Alx1Q8C8B0 Gm23329-201ENSMUST00000157415 108 ntBASIC1.19□□□□□ -2.22
Alx1Q8C8B0 Gm23332-201ENSMUST00000157424 275 ntBASIC1.19□□□□□ -2.22
Alx1Q8C8B0 Gm25454-201ENSMUST00000157947 315 ntBASIC1.19□□□□□ -2.22
Alx1Q8C8B0 Gm17162-201ENSMUST00000168538 473 ntBASIC1.19□□□□□ -2.22
Alx1Q8C8B0 Gm22307-201ENSMUST00000180019 107 ntBASIC1.19□□□□□ -2.22
Alx1Q8C8B0 Gm42774-201ENSMUST00000198854 283 ntBASIC1.19□□□□□ -2.22
Alx1Q8C8B0 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.19□□□□□ -2.22
Alx1Q8C8B0 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.19□□□□□ -2.22
Alx1Q8C8B0 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC1.19□□□□□ -2.22
Alx1Q8C8B0 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Alx1Q8C8B0 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
Alx1Q8C8B0 AC153881.3-201ENSMUST00000218494 1561 ntBASIC1.18□□□□□ -2.22
Alx1Q8C8B0 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.18□□□□□ -2.22
Alx1Q8C8B0 Gm24889-201ENSMUST00000104388 132 ntBASIC1.18□□□□□ -2.22
Alx1Q8C8B0 Gm13343-201ENSMUST00000116474 105 ntBASIC1.18□□□□□ -2.22
Alx1Q8C8B0 Gm13903-201ENSMUST00000120945 193 ntBASIC1.18□□□□□ -2.22
Alx1Q8C8B0 Mir1904-201ENSMUST00000122702 80 ntBASIC1.18□□□□□ -2.22
Alx1Q8C8B0 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Alx1Q8C8B0 Gm27878-201ENSMUST00000184000 106 ntBASIC1.18□□□□□ -2.22
Alx1Q8C8B0 Gm28825-201ENSMUST00000186233 238 ntBASIC1.18□□□□□ -2.22
Alx1Q8C8B0 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.18□□□□□ -2.22
Alx1Q8C8B0 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.18□□□□□ -2.22
Alx1Q8C8B0 Gm43652-201ENSMUST00000196219 675 ntBASIC1.18□□□□□ -2.22
Alx1Q8C8B0 Gm44665-201ENSMUST00000205381 251 ntBASIC1.18□□□□□ -2.22
Alx1Q8C8B0 Gm45730-201ENSMUST00000212560 395 ntBASIC1.18□□□□□ -2.22
Alx1Q8C8B0 Snora3-201ENSMUST00000083082 132 ntBASIC1.18□□□□□ -2.22
Alx1Q8C8B0 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Alx1Q8C8B0 Gm25068-201ENSMUST00000103895 110 ntBASIC1.17□□□□□ -2.22
Alx1Q8C8B0 Gm14774-201ENSMUST00000117857 536 ntBASIC1.17□□□□□ -2.22
Alx1Q8C8B0 Gm6923-201ENSMUST00000118343 406 ntBASIC1.17□□□□□ -2.22
Alx1Q8C8B0 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.17□□□□□ -2.22
Alx1Q8C8B0 Gm14629-201ENSMUST00000122428 144 ntBASIC1.17□□□□□ -2.22
Alx1Q8C8B0 Gm23752-201ENSMUST00000157584 115 ntBASIC1.17□□□□□ -2.22
Alx1Q8C8B0 Gm25715-201ENSMUST00000158627 125 ntBASIC1.17□□□□□ -2.22
Alx1Q8C8B0 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
Alx1Q8C8B0 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms