Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm43600-201ENSMUST00000202134 223 ntBASIC4.43□□□□□ -1.7
Usp40Q8BWR4 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC4.43□□□□□ -1.7
Usp40Q8BWR4 AC125223.1-203ENSMUST00000225304 498 ntBASIC4.43□□□□□ -1.7
Usp40Q8BWR4 Snord14e-201ENSMUST00000082857 90 ntBASIC4.43□□□□□ -1.7
Usp40Q8BWR4 Gm23095-201ENSMUST00000083446 107 ntBASIC4.43□□□□□ -1.7
Usp40Q8BWR4 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Usp40Q8BWR4 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Usp40Q8BWR4 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Usp40Q8BWR4 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Usp40Q8BWR4 Gm42446-201ENSMUST00000199783 3284 ntBASIC4.42□□□□□ -1.7
Usp40Q8BWR4 Gm27047-201ENSMUST00000183072 1819 ntBASIC4.42□□□□□ -1.7
Usp40Q8BWR4 Gm18337-201ENSMUST00000219023 5762 ntBASIC4.42□□□□□ -1.7
Usp40Q8BWR4 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Usp40Q8BWR4 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Usp40Q8BWR4 Gm14119-201ENSMUST00000119511 235 ntBASIC4.42□□□□□ -1.7
Usp40Q8BWR4 Gm13443-201ENSMUST00000120770 555 ntBASIC4.42□□□□□ -1.7
Usp40Q8BWR4 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC4.42□□□□□ -1.7
Usp40Q8BWR4 Gm26149-201ENSMUST00000157432 108 ntBASIC4.42□□□□□ -1.7
Usp40Q8BWR4 Gm25720-201ENSMUST00000157503 105 ntBASIC4.42□□□□□ -1.7
Usp40Q8BWR4 Gm25914-201ENSMUST00000157618 153 ntBASIC4.42□□□□□ -1.7
Usp40Q8BWR4 Gm22384-201ENSMUST00000158187 104 ntBASIC4.42□□□□□ -1.7
Usp40Q8BWR4 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Usp40Q8BWR4 Gm27421-201ENSMUST00000184729 167 ntBASIC4.42□□□□□ -1.7
Usp40Q8BWR4 Gm28339-201ENSMUST00000185845 696 ntBASIC4.42□□□□□ -1.7
Usp40Q8BWR4 Gm29610-201ENSMUST00000187749 453 ntBASIC4.42□□□□□ -1.7
Usp40Q8BWR4 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC4.42□□□□□ -1.7
Usp40Q8BWR4 Gm9696-202ENSMUST00000191541 830 ntBASIC4.42□□□□□ -1.7
Usp40Q8BWR4 Gm37692-201ENSMUST00000192633 232 ntBASIC4.42□□□□□ -1.7
Usp40Q8BWR4 Gm6059-201ENSMUST00000196903 340 ntBASIC4.42□□□□□ -1.7
Usp40Q8BWR4 Gm44376-201ENSMUST00000197570 128 ntBASIC4.42□□□□□ -1.7
Usp40Q8BWR4 Gm44473-201ENSMUST00000204039 152 ntBASIC4.42□□□□□ -1.7
Usp40Q8BWR4 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC4.42□□□□□ -1.7
Usp40Q8BWR4 AC124739.2-201ENSMUST00000222201 109 ntBASIC4.42□□□□□ -1.7
Usp40Q8BWR4 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC4.42□□□□□ -1.7
Usp40Q8BWR4 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Usp40Q8BWR4 Snora31-201ENSMUST00000083213 130 ntBASIC4.42□□□□□ -1.7
Usp40Q8BWR4 Gm22297-201ENSMUST00000083312 106 ntBASIC4.42□□□□□ -1.7
Usp40Q8BWR4 Gm23041-201ENSMUST00000083868 106 ntBASIC4.42□□□□□ -1.7
Usp40Q8BWR4 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Usp40Q8BWR4 Gm8744-201ENSMUST00000204475 3581 ntBASIC4.42□□□□□ -1.7
Usp40Q8BWR4 Gm43259-201ENSMUST00000198446 3277 ntBASIC4.42□□□□□ -1.7
Usp40Q8BWR4 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Usp40Q8BWR4 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC4.42□□□□□ -1.7
Usp40Q8BWR4 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Usp40Q8BWR4 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Usp40Q8BWR4 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Usp40Q8BWR4 Gm37320-201ENSMUST00000192781 4953 ntBASIC4.42□□□□□ -1.7
Usp40Q8BWR4 Gm37626-201ENSMUST00000194332 4563 ntBASIC4.41□□□□□ -1.7
Usp40Q8BWR4 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Usp40Q8BWR4 AC132237.1-201ENSMUST00000220950 4475 ntBASIC4.41□□□□□ -1.7
Usp40Q8BWR4 Gm25875-201ENSMUST00000104323 107 ntBASIC4.41□□□□□ -1.7
Usp40Q8BWR4 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC4.41□□□□□ -1.7
Usp40Q8BWR4 Gm13903-201ENSMUST00000120945 193 ntBASIC4.41□□□□□ -1.7
Usp40Q8BWR4 n-R5s80-201ENSMUST00000122596 111 ntBASIC4.41□□□□□ -1.7
Usp40Q8BWR4 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC4.41□□□□□ -1.7
Usp40Q8BWR4 Gm22849-201ENSMUST00000157713 307 ntBASIC4.41□□□□□ -1.7
Usp40Q8BWR4 Gm28020-201ENSMUST00000157739 67 ntBASIC4.41□□□□□ -1.7
Usp40Q8BWR4 Gm22769-201ENSMUST00000158367 98 ntBASIC4.41□□□□□ -1.7
Usp40Q8BWR4 Gm17052-201ENSMUST00000165496 289 ntBASIC4.41□□□□□ -1.7
Usp40Q8BWR4 Mir3470b-201ENSMUST00000175563 126 ntBASIC4.41□□□□□ -1.7
Usp40Q8BWR4 Gm21827-201ENSMUST00000178247 423 ntBASIC4.41□□□□□ -1.7
Usp40Q8BWR4 Gm18433-202ENSMUST00000195682 196 ntBASIC4.41□□□□□ -1.7
Usp40Q8BWR4 Mir7661-201ENSMUST00000197023 61 ntBASIC4.41□□□□□ -1.7
Usp40Q8BWR4 Gm18453-201ENSMUST00000208000 626 ntBASIC4.41□□□□□ -1.7
Usp40Q8BWR4 Gm45296-201ENSMUST00000209625 205 ntBASIC4.41□□□□□ -1.7
Usp40Q8BWR4 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC4.41□□□□□ -1.7
Usp40Q8BWR4 Gm5899-201ENSMUST00000071770 270 ntBASIC4.41□□□□□ -1.7
Usp40Q8BWR4 Gm23615-201ENSMUST00000082602 65 ntBASIC4.41□□□□□ -1.7
Usp40Q8BWR4 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC4.41□□□□□ -1.7
Usp40Q8BWR4 Gm37899-201ENSMUST00000193116 8717 ntBASIC4.41□□□□□ -1.7
Usp40Q8BWR4 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC4.41□□□□□ -1.7
Usp40Q8BWR4 Gm14421-201ENSMUST00000121755 1958 ntBASIC4.4□□□□□ -1.7
Usp40Q8BWR4 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.7
Usp40Q8BWR4 Mir599-201ENSMUST00000102378 88 ntBASIC4.4□□□□□ -1.71
Usp40Q8BWR4 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Usp40Q8BWR4 Gm14868-201ENSMUST00000117840 216 ntBASIC4.4□□□□□ -1.71
Usp40Q8BWR4 Gm12495-201ENSMUST00000119750 447 ntBASIC4.4□□□□□ -1.71
Usp40Q8BWR4 Gm3851-201ENSMUST00000168653 318 ntBASIC4.4□□□□□ -1.71
Usp40Q8BWR4 Gm26061-201ENSMUST00000175584 108 ntBASIC4.4□□□□□ -1.71
Usp40Q8BWR4 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC4.4□□□□□ -1.71
Usp40Q8BWR4 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC4.4□□□□□ -1.71
Usp40Q8BWR4 AC130477.2-201ENSMUST00000228158 274 ntBASIC4.4□□□□□ -1.71
Usp40Q8BWR4 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC4.4□□□□□ -1.71
Usp40Q8BWR4 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Usp40Q8BWR4 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Usp40Q8BWR4 Gm42927-201ENSMUST00000200624 3841 ntBASIC4.4□□□□□ -1.71
Usp40Q8BWR4 AC155830.1-201ENSMUST00000220050 3836 ntBASIC4.4□□□□□ -1.71
Usp40Q8BWR4 AC154548.1-201ENSMUST00000225844 3838 ntBASIC4.4□□□□□ -1.71
Usp40Q8BWR4 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Usp40Q8BWR4 Gm43486-201ENSMUST00000196431 4339 ntBASIC4.4□□□□□ -1.71
Usp40Q8BWR4 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
Usp40Q8BWR4 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Usp40Q8BWR4 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Usp40Q8BWR4 Gm17969-201ENSMUST00000185706 2557 ntBASIC4.39□□□□□ -1.71
Usp40Q8BWR4 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Usp40Q8BWR4 Gm37848-201ENSMUST00000195288 3103 ntBASIC4.39□□□□□ -1.71
Usp40Q8BWR4 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC4.39□□□□□ -1.71
Usp40Q8BWR4 Gm11430-201ENSMUST00000121317 217 ntBASIC4.39□□□□□ -1.71
Usp40Q8BWR4 Gm15466-201ENSMUST00000122299 333 ntBASIC4.39□□□□□ -1.71
Usp40Q8BWR4 Gm25664-201ENSMUST00000157697 107 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms