Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm20304-201ENSMUST00000218168 444 ntBASIC2.32□□□□□ -2.04
Ccdc40Q8BI79 AC120553.1-201ENSMUST00000227313 260 ntBASIC2.32□□□□□ -2.04
Ccdc40Q8BI79 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC2.32□□□□□ -2.04
Ccdc40Q8BI79 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Ccdc40Q8BI79 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Ccdc40Q8BI79 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
Ccdc40Q8BI79 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Ccdc40Q8BI79 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.32□□□□□ -2.04
Ccdc40Q8BI79 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.31□□□□□ -2.04
Ccdc40Q8BI79 Gm381-201ENSMUST00000117443 2037 ntBASIC2.31□□□□□ -2.04
Ccdc40Q8BI79 Gm24907-201ENSMUST00000116932 128 ntBASIC2.31□□□□□ -2.04
Ccdc40Q8BI79 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC2.31□□□□□ -2.04
Ccdc40Q8BI79 Gm15986-201ENSMUST00000122153 400 ntBASIC2.31□□□□□ -2.04
Ccdc40Q8BI79 Gm16510-201ENSMUST00000153501 249 ntBASIC2.31□□□□□ -2.04
Ccdc40Q8BI79 Gm25910-201ENSMUST00000157620 140 ntBASIC2.31□□□□□ -2.04
Ccdc40Q8BI79 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC2.31□□□□□ -2.04
Ccdc40Q8BI79 Gm2930-201ENSMUST00000170403 474 ntBASIC2.31□□□□□ -2.04
Ccdc40Q8BI79 Gm25243-201ENSMUST00000174912 207 ntBASIC2.31□□□□□ -2.04
Ccdc40Q8BI79 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Ccdc40Q8BI79 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC2.31□□□□□ -2.04
Ccdc40Q8BI79 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC2.31□□□□□ -2.04
Ccdc40Q8BI79 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.31□□□□□ -2.04
Ccdc40Q8BI79 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC2.31□□□□□ -2.04
Ccdc40Q8BI79 AC170810.3-201ENSMUST00000226177 374 ntBASIC2.31□□□□□ -2.04
Ccdc40Q8BI79 AC166344.2-201ENSMUST00000226747 374 ntBASIC2.31□□□□□ -2.04
Ccdc40Q8BI79 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Ccdc40Q8BI79 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC2.3□□□□□ -2.04
Ccdc40Q8BI79 Gm14894-201ENSMUST00000117170 270 ntBASIC2.3□□□□□ -2.04
Ccdc40Q8BI79 Gm12598-201ENSMUST00000117333 830 ntBASIC2.3□□□□□ -2.04
Ccdc40Q8BI79 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC2.3□□□□□ -2.04
Ccdc40Q8BI79 Gm22389-201ENSMUST00000158193 301 ntBASIC2.3□□□□□ -2.04
Ccdc40Q8BI79 Gm25711-201ENSMUST00000158633 128 ntBASIC2.3□□□□□ -2.04
Ccdc40Q8BI79 Gm15914-201ENSMUST00000161922 309 ntBASIC2.3□□□□□ -2.04
Ccdc40Q8BI79 Gm18358-201ENSMUST00000173179 1277 ntBASIC2.3□□□□□ -2.04
Ccdc40Q8BI79 Gm37449-201ENSMUST00000193016 270 ntBASIC2.3□□□□□ -2.04
Ccdc40Q8BI79 Gm37709-201ENSMUST00000195074 600 ntBASIC2.3□□□□□ -2.04
Ccdc40Q8BI79 Gm18658-201ENSMUST00000195558 270 ntBASIC2.3□□□□□ -2.04
Ccdc40Q8BI79 Gm42672-201ENSMUST00000197821 352 ntBASIC2.3□□□□□ -2.04
Ccdc40Q8BI79 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.3□□□□□ -2.04
Ccdc40Q8BI79 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC2.3□□□□□ -2.04
Ccdc40Q8BI79 AC158622.1-201ENSMUST00000217107 230 ntBASIC2.3□□□□□ -2.04
Ccdc40Q8BI79 AC069561.2-201ENSMUST00000217596 420 ntBASIC2.3□□□□□ -2.04
Ccdc40Q8BI79 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC2.3□□□□□ -2.04
Ccdc40Q8BI79 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Ccdc40Q8BI79 AC174797.4-201ENSMUST00000225510 347 ntBASIC2.3□□□□□ -2.04
Ccdc40Q8BI79 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.3□□□□□ -2.04
Ccdc40Q8BI79 Gm24661-201ENSMUST00000083205 104 ntBASIC2.3□□□□□ -2.04
Ccdc40Q8BI79 Gm26263-201ENSMUST00000083281 164 ntBASIC2.3□□□□□ -2.04
Ccdc40Q8BI79 Gm23246-201ENSMUST00000083371 67 ntBASIC2.3□□□□□ -2.04
Ccdc40Q8BI79 Mir300-201ENSMUST00000083485 79 ntBASIC2.3□□□□□ -2.04
Ccdc40Q8BI79 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.3□□□□□ -2.04
Ccdc40Q8BI79 Mir127-201ENSMUST00000093568 70 ntBASIC2.3□□□□□ -2.04
Ccdc40Q8BI79 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.3□□□□□ -2.04
Ccdc40Q8BI79 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.29□□□□□ -2.04
Ccdc40Q8BI79 Mdga2-203ENSMUST00000113942 423 ntBASIC2.29□□□□□ -2.04
Ccdc40Q8BI79 Gm11935-201ENSMUST00000118608 399 ntBASIC2.29□□□□□ -2.04
Ccdc40Q8BI79 Gm12639-201ENSMUST00000121400 493 ntBASIC2.29□□□□□ -2.04
Ccdc40Q8BI79 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.29□□□□□ -2.04
Ccdc40Q8BI79 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.29□□□□□ -2.04
Ccdc40Q8BI79 Gm25413-201ENSMUST00000158544 312 ntBASIC2.29□□□□□ -2.04
Ccdc40Q8BI79 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC2.29□□□□□ -2.04
Ccdc40Q8BI79 Gm16326-201ENSMUST00000162843 414 ntBASIC2.29□□□□□ -2.04
Ccdc40Q8BI79 Gm27369-201ENSMUST00000185182 71 ntBASIC2.29□□□□□ -2.04
Ccdc40Q8BI79 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC2.29□□□□□ -2.04
Ccdc40Q8BI79 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC2.29□□□□□ -2.04
Ccdc40Q8BI79 Gm29809-201ENSMUST00000218423 493 ntBASIC2.29□□□□□ -2.04
Ccdc40Q8BI79 Gm17890-201ENSMUST00000221419 757 ntBASIC2.29□□□□□ -2.04
Ccdc40Q8BI79 CT010480.5-201ENSMUST00000225026 217 ntBASIC2.29□□□□□ -2.04
Ccdc40Q8BI79 AC158521.1-201ENSMUST00000225295 660 ntBASIC2.29□□□□□ -2.04
Ccdc40Q8BI79 CT010506.2-201ENSMUST00000225618 183 ntBASIC2.29□□□□□ -2.04
Ccdc40Q8BI79 AC144628.2-201ENSMUST00000227374 352 ntBASIC2.29□□□□□ -2.04
Ccdc40Q8BI79 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Ccdc40Q8BI79 Gm37903-201ENSMUST00000192122 2381 ntBASIC2.28□□□□□ -2.04
Ccdc40Q8BI79 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC2.28□□□□□ -2.04
Ccdc40Q8BI79 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Ccdc40Q8BI79 Gm23981-201ENSMUST00000157136 106 ntBASIC2.28□□□□□ -2.04
Ccdc40Q8BI79 Gm23391-201ENSMUST00000157579 104 ntBASIC2.28□□□□□ -2.04
Ccdc40Q8BI79 Gm25488-201ENSMUST00000158728 118 ntBASIC2.28□□□□□ -2.04
Ccdc40Q8BI79 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC2.28□□□□□ -2.04
Ccdc40Q8BI79 Gm10193-201ENSMUST00000188288 231 ntBASIC2.28□□□□□ -2.04
Ccdc40Q8BI79 Gm37119-201ENSMUST00000195691 389 ntBASIC2.28□□□□□ -2.04
Ccdc40Q8BI79 Mir3068-202ENSMUST00000197755 79 ntBASIC2.28□□□□□ -2.04
Ccdc40Q8BI79 Gm43865-201ENSMUST00000204721 127 ntBASIC2.28□□□□□ -2.04
Ccdc40Q8BI79 Gm45730-201ENSMUST00000212560 395 ntBASIC2.28□□□□□ -2.04
Ccdc40Q8BI79 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC2.28□□□□□ -2.04
Ccdc40Q8BI79 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.28□□□□□ -2.04
Ccdc40Q8BI79 Gm22806-201ENSMUST00000082738 136 ntBASIC2.28□□□□□ -2.04
Ccdc40Q8BI79 Gm22229-201ENSMUST00000082987 108 ntBASIC2.28□□□□□ -2.04
Ccdc40Q8BI79 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC2.28□□□□□ -2.04
Ccdc40Q8BI79 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC2.28□□□□□ -2.04
Ccdc40Q8BI79 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Ccdc40Q8BI79 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Ccdc40Q8BI79 Gm24274-201ENSMUST00000116787 124 ntBASIC2.27□□□□□ -2.05
Ccdc40Q8BI79 Gm7164-201ENSMUST00000117503 450 ntBASIC2.27□□□□□ -2.05
Ccdc40Q8BI79 Gm15215-201ENSMUST00000117773 489 ntBASIC2.27□□□□□ -2.05
Ccdc40Q8BI79 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC2.27□□□□□ -2.05
Ccdc40Q8BI79 Gm14887-201ENSMUST00000119522 663 ntBASIC2.27□□□□□ -2.05
Ccdc40Q8BI79 Gm14551-201ENSMUST00000120802 256 ntBASIC2.27□□□□□ -2.05
Ccdc40Q8BI79 Gm14638-201ENSMUST00000121338 216 ntBASIC2.27□□□□□ -2.05
Ccdc40Q8BI79 Gm23429-201ENSMUST00000122486 149 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms