Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.67□□□□□ -2.14
Rpap1Q80TE0 Gm23265-201ENSMUST00000178321 94 ntBASIC1.67□□□□□ -2.14
Rpap1Q80TE0 Gm22812-201ENSMUST00000178329 94 ntBASIC1.67□□□□□ -2.14
Rpap1Q80TE0 Snord116l3-201ENSMUST00000178370 94 ntBASIC1.67□□□□□ -2.14
Rpap1Q80TE0 Gm26246-201ENSMUST00000178388 94 ntBASIC1.67□□□□□ -2.14
Rpap1Q80TE0 Gm25155-201ENSMUST00000178450 94 ntBASIC1.67□□□□□ -2.14
Rpap1Q80TE0 Gm24760-201ENSMUST00000178530 94 ntBASIC1.67□□□□□ -2.14
Rpap1Q80TE0 Gm22285-201ENSMUST00000178576 94 ntBASIC1.67□□□□□ -2.14
Rpap1Q80TE0 Gm22417-201ENSMUST00000178656 94 ntBASIC1.67□□□□□ -2.14
Rpap1Q80TE0 Mup-ps8-201ENSMUST00000178663 545 ntBASIC1.67□□□□□ -2.14
Rpap1Q80TE0 Snord116l2-201ENSMUST00000178675 94 ntBASIC1.67□□□□□ -2.14
Rpap1Q80TE0 Gm26270-201ENSMUST00000178690 94 ntBASIC1.67□□□□□ -2.14
Rpap1Q80TE0 Snord116l16-201ENSMUST00000178777 94 ntBASIC1.67□□□□□ -2.14
Rpap1Q80TE0 Gm23313-201ENSMUST00000178931 94 ntBASIC1.67□□□□□ -2.14
Rpap1Q80TE0 Snord116l17-201ENSMUST00000178936 94 ntBASIC1.67□□□□□ -2.14
Rpap1Q80TE0 Gm23089-201ENSMUST00000178947 94 ntBASIC1.67□□□□□ -2.14
Rpap1Q80TE0 Snord116l10-201ENSMUST00000179053 94 ntBASIC1.67□□□□□ -2.14
Rpap1Q80TE0 Gm24153-201ENSMUST00000179280 94 ntBASIC1.67□□□□□ -2.14
Rpap1Q80TE0 Gm25597-201ENSMUST00000179388 94 ntBASIC1.67□□□□□ -2.14
Rpap1Q80TE0 Snord116l1-201ENSMUST00000179518 94 ntBASIC1.67□□□□□ -2.14
Rpap1Q80TE0 Mup-ps6-201ENSMUST00000179564 545 ntBASIC1.67□□□□□ -2.14
Rpap1Q80TE0 Gm25816-201ENSMUST00000179764 94 ntBASIC1.67□□□□□ -2.14
Rpap1Q80TE0 Snord116l8-201ENSMUST00000179889 94 ntBASIC1.67□□□□□ -2.14
Rpap1Q80TE0 Snord116l7-201ENSMUST00000179895 94 ntBASIC1.67□□□□□ -2.14
Rpap1Q80TE0 Snord116l5-201ENSMUST00000179927 94 ntBASIC1.67□□□□□ -2.14
Rpap1Q80TE0 Snord116l6-201ENSMUST00000179955 94 ntBASIC1.67□□□□□ -2.14
Rpap1Q80TE0 Gm26188-201ENSMUST00000179963 94 ntBASIC1.67□□□□□ -2.14
Rpap1Q80TE0 Gm26433-201ENSMUST00000180227 94 ntBASIC1.67□□□□□ -2.14
Rpap1Q80TE0 Snord116l11-201ENSMUST00000180312 94 ntBASIC1.67□□□□□ -2.14
Rpap1Q80TE0 Gm22128-201ENSMUST00000180346 94 ntBASIC1.67□□□□□ -2.14
Rpap1Q80TE0 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC1.67□□□□□ -2.14
Rpap1Q80TE0 Gm42924-201ENSMUST00000197261 185 ntBASIC1.67□□□□□ -2.14
Rpap1Q80TE0 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC1.67□□□□□ -2.14
Rpap1Q80TE0 Gm29920-201ENSMUST00000206876 754 ntBASIC1.67□□□□□ -2.14
Rpap1Q80TE0 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC1.67□□□□□ -2.14
Rpap1Q80TE0 Mir27b-201ENSMUST00000083541 73 ntBASIC1.67□□□□□ -2.14
Rpap1Q80TE0 Mir137-201ENSMUST00000083635 73 ntBASIC1.67□□□□□ -2.14
Rpap1Q80TE0 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Rpap1Q80TE0 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.67□□□□□ -2.14
Rpap1Q80TE0 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC1.66□□□□□ -2.14
Rpap1Q80TE0 Igkv13-87-201ENSMUST00000114214 286 ntBASIC1.66□□□□□ -2.14
Rpap1Q80TE0 Gm13454-201ENSMUST00000118166 483 ntBASIC1.66□□□□□ -2.14
Rpap1Q80TE0 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC1.66□□□□□ -2.14
Rpap1Q80TE0 Igkv1-108-201ENSMUST00000198926 298 ntBASIC1.66□□□□□ -2.14
Rpap1Q80TE0 Gm44295-201ENSMUST00000203805 437 ntBASIC1.66□□□□□ -2.14
Rpap1Q80TE0 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC1.66□□□□□ -2.14
Rpap1Q80TE0 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Rpap1Q80TE0 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Rpap1Q80TE0 Mir208a-201ENSMUST00000083498 83 ntBASIC1.66□□□□□ -2.14
Rpap1Q80TE0 Gm42721-201ENSMUST00000197165 1523 ntBASIC1.66□□□□□ -2.14
Rpap1Q80TE0 Gm15113-201ENSMUST00000119280 836 ntBASIC1.66□□□□□ -2.14
Rpap1Q80TE0 Gm14363-201ENSMUST00000122304 409 ntBASIC1.66□□□□□ -2.14
Rpap1Q80TE0 Gm25047-201ENSMUST00000122667 104 ntBASIC1.66□□□□□ -2.14
Rpap1Q80TE0 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC1.66□□□□□ -2.14
Rpap1Q80TE0 Mir5129-201ENSMUST00000174938 78 ntBASIC1.66□□□□□ -2.14
Rpap1Q80TE0 Gm25120-201ENSMUST00000180148 79 ntBASIC1.66□□□□□ -2.14
Rpap1Q80TE0 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC1.66□□□□□ -2.14
Rpap1Q80TE0 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC1.66□□□□□ -2.14
Rpap1Q80TE0 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.66□□□□□ -2.14
Rpap1Q80TE0 Mir219b-201ENSMUST00000198317 65 ntBASIC1.66□□□□□ -2.14
Rpap1Q80TE0 AC157017.2-201ENSMUST00000218354 777 ntBASIC1.66□□□□□ -2.14
Rpap1Q80TE0 AC154552.4-201ENSMUST00000222171 151 ntBASIC1.66□□□□□ -2.14
Rpap1Q80TE0 Platr25-208ENSMUST00000222602 939 ntBASIC1.66□□□□□ -2.14
Rpap1Q80TE0 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC1.66□□□□□ -2.14
Rpap1Q80TE0 Gm23452-201ENSMUST00000083327 107 ntBASIC1.66□□□□□ -2.14
Rpap1Q80TE0 Mir124a-3-201ENSMUST00000083520 68 ntBASIC1.66□□□□□ -2.14
Rpap1Q80TE0 Gm7429-201ENSMUST00000118664 348 ntBASIC1.65□□□□□ -2.15
Rpap1Q80TE0 Gm15029-201ENSMUST00000119742 199 ntBASIC1.65□□□□□ -2.15
Rpap1Q80TE0 Gm13239-201ENSMUST00000119920 637 ntBASIC1.65□□□□□ -2.15
Rpap1Q80TE0 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC1.65□□□□□ -2.15
Rpap1Q80TE0 Gm26105-201ENSMUST00000157253 190 ntBASIC1.65□□□□□ -2.15
Rpap1Q80TE0 Gm25666-201ENSMUST00000157702 107 ntBASIC1.65□□□□□ -2.15
Rpap1Q80TE0 Gm23559-201ENSMUST00000157824 103 ntBASIC1.65□□□□□ -2.15
Rpap1Q80TE0 Gm23704-201ENSMUST00000158844 340 ntBASIC1.65□□□□□ -2.15
Rpap1Q80TE0 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
Rpap1Q80TE0 Gm21885-201ENSMUST00000178891 327 ntBASIC1.65□□□□□ -2.15
Rpap1Q80TE0 Gm29192-201ENSMUST00000190942 377 ntBASIC1.65□□□□□ -2.15
Rpap1Q80TE0 Gm33866-201ENSMUST00000196911 289 ntBASIC1.65□□□□□ -2.15
Rpap1Q80TE0 Gm44462-201ENSMUST00000199696 129 ntBASIC1.65□□□□□ -2.15
Rpap1Q80TE0 Gm44830-201ENSMUST00000207667 584 ntBASIC1.65□□□□□ -2.15
Rpap1Q80TE0 Gm18991-201ENSMUST00000209225 746 ntBASIC1.65□□□□□ -2.15
Rpap1Q80TE0 AC105958.2-201ENSMUST00000214167 191 ntBASIC1.65□□□□□ -2.15
Rpap1Q80TE0 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.65□□□□□ -2.15
Rpap1Q80TE0 AC154262.1-201ENSMUST00000225976 286 ntBASIC1.65□□□□□ -2.15
Rpap1Q80TE0 Gm10780-201ENSMUST00000099459 285 ntBASIC1.65□□□□□ -2.15
Rpap1Q80TE0 Gm6954-201ENSMUST00000117416 225 ntBASIC1.64□□□□□ -2.15
Rpap1Q80TE0 Gm14669-201ENSMUST00000118841 250 ntBASIC1.64□□□□□ -2.15
Rpap1Q80TE0 Gm14600-201ENSMUST00000121032 630 ntBASIC1.64□□□□□ -2.15
Rpap1Q80TE0 Gm15381-201ENSMUST00000121501 1156 ntBASIC1.64□□□□□ -2.15
Rpap1Q80TE0 n-R5s216-201ENSMUST00000122755 112 ntBASIC1.64□□□□□ -2.15
Rpap1Q80TE0 Gm22945-201ENSMUST00000158557 157 ntBASIC1.64□□□□□ -2.15
Rpap1Q80TE0 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC1.64□□□□□ -2.15
Rpap1Q80TE0 Gm37005-201ENSMUST00000193281 1164 ntBASIC1.64□□□□□ -2.15
Rpap1Q80TE0 Gm44483-201ENSMUST00000197203 97 ntBASIC1.64□□□□□ -2.15
Rpap1Q80TE0 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.64□□□□□ -2.15
Rpap1Q80TE0 CT010455.1-201ENSMUST00000218579 413 ntBASIC1.64□□□□□ -2.15
Rpap1Q80TE0 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.64□□□□□ -2.15
Rpap1Q80TE0 n-R5s79-201ENSMUST00000083071 120 ntBASIC1.64□□□□□ -2.15
Rpap1Q80TE0 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.64□□□□□ -2.15
Rpap1Q80TE0 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC1.63□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms