Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Ubfd1Q78JW9 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Ubfd1Q78JW9 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Ubfd1Q78JW9 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.17□□□□□ -1.9
Ubfd1Q78JW9 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC3.17□□□□□ -1.9
Ubfd1Q78JW9 Mir1942-201ENSMUST00000157274 63 ntBASIC3.17□□□□□ -1.9
Ubfd1Q78JW9 Gm25486-201ENSMUST00000158726 63 ntBASIC3.17□□□□□ -1.9
Ubfd1Q78JW9 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC3.17□□□□□ -1.9
Ubfd1Q78JW9 Gm45403-201ENSMUST00000209453 276 ntBASIC3.17□□□□□ -1.9
Ubfd1Q78JW9 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.17□□□□□ -1.9
Ubfd1Q78JW9 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Ubfd1Q78JW9 Gm26066-201ENSMUST00000083385 109 ntBASIC3.17□□□□□ -1.9
Ubfd1Q78JW9 Gm23136-201ENSMUST00000083425 99 ntBASIC3.17□□□□□ -1.9
Ubfd1Q78JW9 Gm25937-201ENSMUST00000083912 107 ntBASIC3.17□□□□□ -1.9
Ubfd1Q78JW9 Gm43326-201ENSMUST00000198459 1638 ntBASIC3.17□□□□□ -1.9
Ubfd1Q78JW9 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
Ubfd1Q78JW9 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.17□□□□□ -1.9
Ubfd1Q78JW9 Gm15975-201ENSMUST00000122385 1402 ntBASIC3.17□□□□□ -1.9
Ubfd1Q78JW9 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Ubfd1Q78JW9 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Ubfd1Q78JW9 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.17□□□□□ -1.9
Ubfd1Q78JW9 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Ubfd1Q78JW9 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.16□□□□□ -1.9
Ubfd1Q78JW9 Gm25308-201ENSMUST00000104171 158 ntBASIC3.16□□□□□ -1.9
Ubfd1Q78JW9 Gm22023-201ENSMUST00000104354 130 ntBASIC3.16□□□□□ -1.9
Ubfd1Q78JW9 Gm14296-202ENSMUST00000108931 750 ntBASIC3.16□□□□□ -1.9
Ubfd1Q78JW9 Gm13761-201ENSMUST00000117238 807 ntBASIC3.16□□□□□ -1.9
Ubfd1Q78JW9 Gm13355-201ENSMUST00000117996 317 ntBASIC3.16□□□□□ -1.9
Ubfd1Q78JW9 Gm9119-201ENSMUST00000118866 495 ntBASIC3.16□□□□□ -1.9
Ubfd1Q78JW9 Gm22479-201ENSMUST00000122566 81 ntBASIC3.16□□□□□ -1.9
Ubfd1Q78JW9 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC3.16□□□□□ -1.9
Ubfd1Q78JW9 Gm24481-201ENSMUST00000157210 102 ntBASIC3.16□□□□□ -1.9
Ubfd1Q78JW9 Gm23586-201ENSMUST00000157657 123 ntBASIC3.16□□□□□ -1.9
Ubfd1Q78JW9 Gm6374-201ENSMUST00000159051 788 ntBASIC3.16□□□□□ -1.9
Ubfd1Q78JW9 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC3.16□□□□□ -1.9
Ubfd1Q78JW9 Gm24085-201ENSMUST00000175172 116 ntBASIC3.16□□□□□ -1.9
Ubfd1Q78JW9 Gm18486-201ENSMUST00000184040 298 ntBASIC3.16□□□□□ -1.9
Ubfd1Q78JW9 Gm18341-201ENSMUST00000197538 622 ntBASIC3.16□□□□□ -1.9
Ubfd1Q78JW9 Gm43035-201ENSMUST00000197626 517 ntBASIC3.16□□□□□ -1.9
Ubfd1Q78JW9 Gm43406-201ENSMUST00000200356 334 ntBASIC3.16□□□□□ -1.9
Ubfd1Q78JW9 Gm44964-201ENSMUST00000207011 273 ntBASIC3.16□□□□□ -1.9
Ubfd1Q78JW9 Gm44844-201ENSMUST00000207242 336 ntBASIC3.16□□□□□ -1.9
Ubfd1Q78JW9 Gm44811-201ENSMUST00000209120 228 ntBASIC3.16□□□□□ -1.9
Ubfd1Q78JW9 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.16□□□□□ -1.9
Ubfd1Q78JW9 AC164297.3-201ENSMUST00000224238 94 ntBASIC3.16□□□□□ -1.9
Ubfd1Q78JW9 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.16□□□□□ -1.9
Ubfd1Q78JW9 Gm22979-201ENSMUST00000082609 159 ntBASIC3.16□□□□□ -1.9
Ubfd1Q78JW9 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Ubfd1Q78JW9 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.16□□□□□ -1.9
Ubfd1Q78JW9 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Ubfd1Q78JW9 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Ubfd1Q78JW9 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
Ubfd1Q78JW9 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Ubfd1Q78JW9 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
Ubfd1Q78JW9 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Ubfd1Q78JW9 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Ubfd1Q78JW9 Gm13806-201ENSMUST00000117822 325 ntBASIC3.15□□□□□ -1.91
Ubfd1Q78JW9 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.15□□□□□ -1.91
Ubfd1Q78JW9 Gm11606-201ENSMUST00000120706 617 ntBASIC3.15□□□□□ -1.91
Ubfd1Q78JW9 Gm25325-201ENSMUST00000122559 86 ntBASIC3.15□□□□□ -1.91
Ubfd1Q78JW9 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Ubfd1Q78JW9 Gm22242-201ENSMUST00000175224 118 ntBASIC3.15□□□□□ -1.91
Ubfd1Q78JW9 Gm22131-201ENSMUST00000178415 94 ntBASIC3.15□□□□□ -1.91
Ubfd1Q78JW9 Gm4479-201ENSMUST00000178807 171 ntBASIC3.15□□□□□ -1.91
Ubfd1Q78JW9 Gm27410-201ENSMUST00000183851 115 ntBASIC3.15□□□□□ -1.91
Ubfd1Q78JW9 Gm28534-201ENSMUST00000187744 676 ntBASIC3.15□□□□□ -1.91
Ubfd1Q78JW9 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.15□□□□□ -1.91
Ubfd1Q78JW9 Gm37281-201ENSMUST00000192412 439 ntBASIC3.15□□□□□ -1.91
Ubfd1Q78JW9 Gm37361-201ENSMUST00000194345 132 ntBASIC3.15□□□□□ -1.91
Ubfd1Q78JW9 Gm44373-201ENSMUST00000196112 169 ntBASIC3.15□□□□□ -1.91
Ubfd1Q78JW9 Gm44654-201ENSMUST00000208052 329 ntBASIC3.15□□□□□ -1.91
Ubfd1Q78JW9 Gm44594-201ENSMUST00000208982 407 ntBASIC3.15□□□□□ -1.91
Ubfd1Q78JW9 Gm18000-201ENSMUST00000212153 800 ntBASIC3.15□□□□□ -1.91
Ubfd1Q78JW9 AC122225.1-201ENSMUST00000215641 369 ntBASIC3.15□□□□□ -1.91
Ubfd1Q78JW9 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC3.15□□□□□ -1.91
Ubfd1Q78JW9 Olfr197-201ENSMUST00000080031 926 ntBASIC3.15□□□□□ -1.91
Ubfd1Q78JW9 Snord14d-201ENSMUST00000083424 86 ntBASIC3.15□□□□□ -1.91
Ubfd1Q78JW9 Gm10212-201ENSMUST00000087884 324 ntBASIC3.15□□□□□ -1.91
Ubfd1Q78JW9 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Ubfd1Q78JW9 Gm650-201ENSMUST00000144428 1551 ntBASIC3.15□□□□□ -1.91
Ubfd1Q78JW9 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
Ubfd1Q78JW9 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
Ubfd1Q78JW9 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.15□□□□□ -1.91
Ubfd1Q78JW9 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.15□□□□□ -1.91
Ubfd1Q78JW9 Gm37941-201ENSMUST00000192170 2309 ntBASIC3.14□□□□□ -1.91
Ubfd1Q78JW9 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
Ubfd1Q78JW9 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC3.14□□□□□ -1.91
Ubfd1Q78JW9 Gm13518-201ENSMUST00000120018 233 ntBASIC3.14□□□□□ -1.91
Ubfd1Q78JW9 Gm13396-201ENSMUST00000120617 271 ntBASIC3.14□□□□□ -1.91
Ubfd1Q78JW9 Gm16362-201ENSMUST00000135189 214 ntBASIC3.14□□□□□ -1.91
Ubfd1Q78JW9 Gm16358-201ENSMUST00000146046 210 ntBASIC3.14□□□□□ -1.91
Ubfd1Q78JW9 Gm23713-201ENSMUST00000157353 70 ntBASIC3.14□□□□□ -1.91
Ubfd1Q78JW9 Gm25054-201ENSMUST00000157370 97 ntBASIC3.14□□□□□ -1.91
Ubfd1Q78JW9 Gm23559-201ENSMUST00000157824 103 ntBASIC3.14□□□□□ -1.91
Ubfd1Q78JW9 Gm22615-201ENSMUST00000158102 70 ntBASIC3.14□□□□□ -1.91
Ubfd1Q78JW9 Gm25066-201ENSMUST00000158145 123 ntBASIC3.14□□□□□ -1.91
Ubfd1Q78JW9 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC3.14□□□□□ -1.91
Ubfd1Q78JW9 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC3.14□□□□□ -1.91
Ubfd1Q78JW9 Gm32033-201ENSMUST00000193483 339 ntBASIC3.14□□□□□ -1.91
Ubfd1Q78JW9 Gm43415-201ENSMUST00000201934 750 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 133.9 ms