Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.7□□□□□ -1.82
Ddx55Q6ZPL9 AC125223.1-203ENSMUST00000225304 498 ntBASIC3.7□□□□□ -1.82
Ddx55Q6ZPL9 Gm25141-201ENSMUST00000083177 107 ntBASIC3.7□□□□□ -1.82
Ddx55Q6ZPL9 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
Ddx55Q6ZPL9 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Ddx55Q6ZPL9 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
Ddx55Q6ZPL9 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
Ddx55Q6ZPL9 CT030170.3-201ENSMUST00000221205 1815 ntBASIC3.7□□□□□ -1.82
Ddx55Q6ZPL9 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.7□□□□□ -1.82
Ddx55Q6ZPL9 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Ddx55Q6ZPL9 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Ddx55Q6ZPL9 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.69□□□□□ -1.82
Ddx55Q6ZPL9 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.69□□□□□ -1.82
Ddx55Q6ZPL9 Gm14296-202ENSMUST00000108931 750 ntBASIC3.69□□□□□ -1.82
Ddx55Q6ZPL9 Gm14841-201ENSMUST00000121067 758 ntBASIC3.69□□□□□ -1.82
Ddx55Q6ZPL9 Gm27926-201ENSMUST00000157180 66 ntBASIC3.69□□□□□ -1.82
Ddx55Q6ZPL9 Gm23956-201ENSMUST00000157211 119 ntBASIC3.69□□□□□ -1.82
Ddx55Q6ZPL9 Gm24958-201ENSMUST00000158009 97 ntBASIC3.69□□□□□ -1.82
Ddx55Q6ZPL9 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC3.69□□□□□ -1.82
Ddx55Q6ZPL9 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC3.69□□□□□ -1.82
Ddx55Q6ZPL9 Gm24618-201ENSMUST00000177718 94 ntBASIC3.69□□□□□ -1.82
Ddx55Q6ZPL9 Gm23953-201ENSMUST00000178214 94 ntBASIC3.69□□□□□ -1.82
Ddx55Q6ZPL9 Gm26332-201ENSMUST00000179813 94 ntBASIC3.69□□□□□ -1.82
Ddx55Q6ZPL9 Gm22863-201ENSMUST00000180265 94 ntBASIC3.69□□□□□ -1.82
Ddx55Q6ZPL9 Gm18982-201ENSMUST00000198118 529 ntBASIC3.69□□□□□ -1.82
Ddx55Q6ZPL9 Mir3970-201ENSMUST00000199287 90 ntBASIC3.69□□□□□ -1.82
Ddx55Q6ZPL9 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.69□□□□□ -1.82
Ddx55Q6ZPL9 AC154262.1-201ENSMUST00000225976 286 ntBASIC3.69□□□□□ -1.82
Ddx55Q6ZPL9 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Ddx55Q6ZPL9 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.68□□□□□ -1.82
Ddx55Q6ZPL9 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Ddx55Q6ZPL9 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Ddx55Q6ZPL9 Mir701-201ENSMUST00000102208 109 ntBASIC3.68□□□□□ -1.82
Ddx55Q6ZPL9 Gm11862-201ENSMUST00000119678 659 ntBASIC3.68□□□□□ -1.82
Ddx55Q6ZPL9 Gm14562-201ENSMUST00000129885 543 ntBASIC3.68□□□□□ -1.82
Ddx55Q6ZPL9 Gm22328-201ENSMUST00000158074 112 ntBASIC3.68□□□□□ -1.82
Ddx55Q6ZPL9 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.68□□□□□ -1.82
Ddx55Q6ZPL9 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Ddx55Q6ZPL9 Gm27410-201ENSMUST00000183851 115 ntBASIC3.68□□□□□ -1.82
Ddx55Q6ZPL9 Gm19244-201ENSMUST00000204340 253 ntBASIC3.68□□□□□ -1.82
Ddx55Q6ZPL9 AC101984.1-201ENSMUST00000219639 402 ntBASIC3.68□□□□□ -1.82
Ddx55Q6ZPL9 AC159885.1-201ENSMUST00000222221 199 ntBASIC3.68□□□□□ -1.82
Ddx55Q6ZPL9 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.68□□□□□ -1.82
Ddx55Q6ZPL9 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC3.68□□□□□ -1.82
Ddx55Q6ZPL9 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Ddx55Q6ZPL9 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Ddx55Q6ZPL9 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.68□□□□□ -1.82
Ddx55Q6ZPL9 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Ddx55Q6ZPL9 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Ddx55Q6ZPL9 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.67□□□□□ -1.82
Ddx55Q6ZPL9 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Ddx55Q6ZPL9 Gm25902-201ENSMUST00000158493 318 ntBASIC3.67□□□□□ -1.82
Ddx55Q6ZPL9 Gm25486-201ENSMUST00000158726 63 ntBASIC3.67□□□□□ -1.82
Ddx55Q6ZPL9 Gm10075-201ENSMUST00000162030 545 ntBASIC3.67□□□□□ -1.82
Ddx55Q6ZPL9 Gm17186-201ENSMUST00000171742 456 ntBASIC3.67□□□□□ -1.82
Ddx55Q6ZPL9 Mir3092-201ENSMUST00000174954 96 ntBASIC3.67□□□□□ -1.82
Ddx55Q6ZPL9 Gm24085-201ENSMUST00000175172 116 ntBASIC3.67□□□□□ -1.82
Ddx55Q6ZPL9 Gm27445-201ENSMUST00000184484 72 ntBASIC3.67□□□□□ -1.82
Ddx55Q6ZPL9 Gm27520-201ENSMUST00000184872 81 ntBASIC3.67□□□□□ -1.82
Ddx55Q6ZPL9 Gm37338-201ENSMUST00000191986 127 ntBASIC3.67□□□□□ -1.82
Ddx55Q6ZPL9 Gm8242-202ENSMUST00000193056 475 ntBASIC3.67□□□□□ -1.82
Ddx55Q6ZPL9 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC3.67□□□□□ -1.82
Ddx55Q6ZPL9 Gm44966-201ENSMUST00000208096 157 ntBASIC3.67□□□□□ -1.82
Ddx55Q6ZPL9 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC3.67□□□□□ -1.82
Ddx55Q6ZPL9 Gm23042-201ENSMUST00000083866 101 ntBASIC3.67□□□□□ -1.82
Ddx55Q6ZPL9 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC3.67□□□□□ -1.82
Ddx55Q6ZPL9 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Ddx55Q6ZPL9 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
Ddx55Q6ZPL9 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Ddx55Q6ZPL9 AC155830.1-201ENSMUST00000220050 3836 ntBASIC3.66□□□□□ -1.82
Ddx55Q6ZPL9 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Ddx55Q6ZPL9 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Ddx55Q6ZPL9 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Ddx55Q6ZPL9 Gm15088-201ENSMUST00000117973 1508 ntBASIC3.66□□□□□ -1.82
Ddx55Q6ZPL9 Gm15098-201ENSMUST00000119036 1508 ntBASIC3.66□□□□□ -1.82
Ddx55Q6ZPL9 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Ddx55Q6ZPL9 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Ddx55Q6ZPL9 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Ddx55Q6ZPL9 Mir1195-201ENSMUST00000116818 98 ntBASIC3.66□□□□□ -1.82
Ddx55Q6ZPL9 Gm23852-201ENSMUST00000158376 77 ntBASIC3.66□□□□□ -1.82
Ddx55Q6ZPL9 Gm27535-201ENSMUST00000183814 157 ntBASIC3.66□□□□□ -1.82
Ddx55Q6ZPL9 Mir7050-201ENSMUST00000184636 60 ntBASIC3.66□□□□□ -1.82
Ddx55Q6ZPL9 Gm7329-201ENSMUST00000185915 210 ntBASIC3.66□□□□□ -1.82
Ddx55Q6ZPL9 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Ddx55Q6ZPL9 Gm19620-201ENSMUST00000195972 434 ntBASIC3.66□□□□□ -1.82
Ddx55Q6ZPL9 Gm9379-201ENSMUST00000196790 646 ntBASIC3.66□□□□□ -1.82
Ddx55Q6ZPL9 Gm9402-201ENSMUST00000196849 388 ntBASIC3.66□□□□□ -1.82
Ddx55Q6ZPL9 Mir7227-201ENSMUST00000200408 59 ntBASIC3.66□□□□□ -1.82
Ddx55Q6ZPL9 Gm32222-201ENSMUST00000203296 298 ntBASIC3.66□□□□□ -1.82
Ddx55Q6ZPL9 Gm44399-201ENSMUST00000205043 226 ntBASIC3.66□□□□□ -1.82
Ddx55Q6ZPL9 Gm7422-201ENSMUST00000220115 640 ntBASIC3.66□□□□□ -1.82
Ddx55Q6ZPL9 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC3.66□□□□□ -1.82
Ddx55Q6ZPL9 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Ddx55Q6ZPL9 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
Ddx55Q6ZPL9 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.66□□□□□ -1.82
Ddx55Q6ZPL9 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Ddx55Q6ZPL9 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
Ddx55Q6ZPL9 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Ddx55Q6ZPL9 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Ddx55Q6ZPL9 Gm15936-201ENSMUST00000118706 460 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms