Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Mir466b-1-201ENSMUST00000177988 82 ntBASIC3.75□□□□□ -1.81
Scaf4Q6PFF0 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Scaf4Q6PFF0 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Scaf4Q6PFF0 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Scaf4Q6PFF0 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC3.75□□□□□ -1.81
Scaf4Q6PFF0 Gm27445-201ENSMUST00000184484 72 ntBASIC3.75□□□□□ -1.81
Scaf4Q6PFF0 Gm30341-201ENSMUST00000194363 289 ntBASIC3.75□□□□□ -1.81
Scaf4Q6PFF0 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Scaf4Q6PFF0 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Scaf4Q6PFF0 Gm43955-201ENSMUST00000204332 142 ntBASIC3.75□□□□□ -1.81
Scaf4Q6PFF0 Gm8274-201ENSMUST00000219820 463 ntBASIC3.75□□□□□ -1.81
Scaf4Q6PFF0 AC166830.2-201ENSMUST00000225821 196 ntBASIC3.75□□□□□ -1.81
Scaf4Q6PFF0 Gm25200-201ENSMUST00000083094 130 ntBASIC3.75□□□□□ -1.81
Scaf4Q6PFF0 Gm24611-201ENSMUST00000083272 107 ntBASIC3.75□□□□□ -1.81
Scaf4Q6PFF0 Mir26a-2-201ENSMUST00000083496 84 ntBASIC3.75□□□□□ -1.81
Scaf4Q6PFF0 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
Scaf4Q6PFF0 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
Scaf4Q6PFF0 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Scaf4Q6PFF0 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Scaf4Q6PFF0 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Scaf4Q6PFF0 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
Scaf4Q6PFF0 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Scaf4Q6PFF0 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
Scaf4Q6PFF0 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Scaf4Q6PFF0 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Scaf4Q6PFF0 Gm11874-201ENSMUST00000117437 130 ntBASIC3.74□□□□□ -1.81
Scaf4Q6PFF0 Gm15120-201ENSMUST00000120602 301 ntBASIC3.74□□□□□ -1.81
Scaf4Q6PFF0 Gm11456-201ENSMUST00000121070 256 ntBASIC3.74□□□□□ -1.81
Scaf4Q6PFF0 Gm12617-201ENSMUST00000121268 381 ntBASIC3.74□□□□□ -1.81
Scaf4Q6PFF0 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC3.74□□□□□ -1.81
Scaf4Q6PFF0 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC3.74□□□□□ -1.81
Scaf4Q6PFF0 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC3.74□□□□□ -1.81
Scaf4Q6PFF0 Gm24666-201ENSMUST00000158937 167 ntBASIC3.74□□□□□ -1.81
Scaf4Q6PFF0 Mir669k-201ENSMUST00000177742 127 ntBASIC3.74□□□□□ -1.81
Scaf4Q6PFF0 Gm25673-201ENSMUST00000179957 127 ntBASIC3.74□□□□□ -1.81
Scaf4Q6PFF0 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC3.74□□□□□ -1.81
Scaf4Q6PFF0 Gm44871-201ENSMUST00000207821 497 ntBASIC3.74□□□□□ -1.81
Scaf4Q6PFF0 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC3.74□□□□□ -1.81
Scaf4Q6PFF0 Fth-ps3-201ENSMUST00000210405 358 ntBASIC3.74□□□□□ -1.81
Scaf4Q6PFF0 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.74□□□□□ -1.81
Scaf4Q6PFF0 AC165293.1-201ENSMUST00000219669 329 ntBASIC3.74□□□□□ -1.81
Scaf4Q6PFF0 CT009713.6-201ENSMUST00000223615 294 ntBASIC3.74□□□□□ -1.81
Scaf4Q6PFF0 AC154276.2-201ENSMUST00000227707 309 ntBASIC3.74□□□□□ -1.81
Scaf4Q6PFF0 Gm22806-201ENSMUST00000082738 136 ntBASIC3.74□□□□□ -1.81
Scaf4Q6PFF0 Gm24148-201ENSMUST00000082762 80 ntBASIC3.74□□□□□ -1.81
Scaf4Q6PFF0 Gm22297-201ENSMUST00000083312 106 ntBASIC3.74□□□□□ -1.81
Scaf4Q6PFF0 Gm22353-201ENSMUST00000083918 136 ntBASIC3.74□□□□□ -1.81
Scaf4Q6PFF0 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Scaf4Q6PFF0 Gm10813-201ENSMUST00000099936 90 ntBASIC3.74□□□□□ -1.81
Scaf4Q6PFF0 Gm43047-201ENSMUST00000200089 3460 ntBASIC3.74□□□□□ -1.81
Scaf4Q6PFF0 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC3.74□□□□□ -1.81
Scaf4Q6PFF0 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.74□□□□□ -1.81
Scaf4Q6PFF0 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Scaf4Q6PFF0 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
Scaf4Q6PFF0 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Scaf4Q6PFF0 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Scaf4Q6PFF0 Gm14537-201ENSMUST00000117464 599 ntBASIC3.73□□□□□ -1.81
Scaf4Q6PFF0 Gm12190-201ENSMUST00000120001 187 ntBASIC3.73□□□□□ -1.81
Scaf4Q6PFF0 Gm23982-201ENSMUST00000157141 106 ntBASIC3.73□□□□□ -1.81
Scaf4Q6PFF0 Gm23956-201ENSMUST00000157211 119 ntBASIC3.73□□□□□ -1.81
Scaf4Q6PFF0 Gm25863-201ENSMUST00000158249 329 ntBASIC3.73□□□□□ -1.81
Scaf4Q6PFF0 Gm25605-201ENSMUST00000158364 124 ntBASIC3.73□□□□□ -1.81
Scaf4Q6PFF0 Gm25162-201ENSMUST00000158906 159 ntBASIC3.73□□□□□ -1.81
Scaf4Q6PFF0 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Scaf4Q6PFF0 Gm29704-201ENSMUST00000196011 253 ntBASIC3.73□□□□□ -1.81
Scaf4Q6PFF0 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.73□□□□□ -1.81
Scaf4Q6PFF0 AC123533.1-201ENSMUST00000227782 446 ntBASIC3.73□□□□□ -1.81
Scaf4Q6PFF0 Mir27a-201ENSMUST00000083510 87 ntBASIC3.73□□□□□ -1.81
Scaf4Q6PFF0 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Scaf4Q6PFF0 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC3.73□□□□□ -1.81
Scaf4Q6PFF0 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
Scaf4Q6PFF0 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Scaf4Q6PFF0 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Scaf4Q6PFF0 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Scaf4Q6PFF0 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Scaf4Q6PFF0 Gm42659-201ENSMUST00000196955 1754 ntBASIC3.72□□□□□ -1.81
Scaf4Q6PFF0 Gm23256-201ENSMUST00000102235 110 ntBASIC3.72□□□□□ -1.81
Scaf4Q6PFF0 Gm26140-201ENSMUST00000103807 110 ntBASIC3.72□□□□□ -1.81
Scaf4Q6PFF0 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC3.72□□□□□ -1.81
Scaf4Q6PFF0 Gm14562-201ENSMUST00000129885 543 ntBASIC3.72□□□□□ -1.81
Scaf4Q6PFF0 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC3.72□□□□□ -1.81
Scaf4Q6PFF0 Gm23257-201ENSMUST00000158322 132 ntBASIC3.72□□□□□ -1.81
Scaf4Q6PFF0 Gm7241-201ENSMUST00000159853 357 ntBASIC3.72□□□□□ -1.81
Scaf4Q6PFF0 Gm23415-201ENSMUST00000175519 83 ntBASIC3.72□□□□□ -1.81
Scaf4Q6PFF0 Gm20693-201ENSMUST00000177431 211 ntBASIC3.72□□□□□ -1.81
Scaf4Q6PFF0 Gm22908-201ENSMUST00000177620 110 ntBASIC3.72□□□□□ -1.81
Scaf4Q6PFF0 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC3.72□□□□□ -1.81
Scaf4Q6PFF0 Gm37670-201ENSMUST00000193622 229 ntBASIC3.72□□□□□ -1.81
Scaf4Q6PFF0 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC3.72□□□□□ -1.81
Scaf4Q6PFF0 Gm37836-201ENSMUST00000195875 175 ntBASIC3.72□□□□□ -1.81
Scaf4Q6PFF0 Gm43704-201ENSMUST00000196164 496 ntBASIC3.72□□□□□ -1.81
Scaf4Q6PFF0 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.72□□□□□ -1.81
Scaf4Q6PFF0 Gm43193-201ENSMUST00000197732 441 ntBASIC3.72□□□□□ -1.81
Scaf4Q6PFF0 Gm43814-201ENSMUST00000197851 413 ntBASIC3.72□□□□□ -1.81
Scaf4Q6PFF0 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Scaf4Q6PFF0 Gm43978-201ENSMUST00000203491 451 ntBASIC3.72□□□□□ -1.81
Scaf4Q6PFF0 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.72□□□□□ -1.81
Scaf4Q6PFF0 CT010449.1-201ENSMUST00000220624 153 ntBASIC3.72□□□□□ -1.81
Scaf4Q6PFF0 Gm24626-201ENSMUST00000082621 161 ntBASIC3.72□□□□□ -1.81
Scaf4Q6PFF0 Mir133a-1-201ENSMUST00000083465 68 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 94.1 ms