Protein–RNA interactions for Protein: Q6PDM4

Ccdc36, Interactor of HORMAD1 protein 1, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc36Q6PDM4 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 Gm16232-201ENSMUST00000162856 167 ntBASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 Gm26335-201ENSMUST00000178449 107 ntBASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 Gm21726-201ENSMUST00000179654 392 ntBASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 Gm14596-201ENSMUST00000180268 537 ntBASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 Gm14595-201ENSMUST00000180335 537 ntBASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 Mir7062-201ENSMUST00000185038 66 ntBASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 Gm29134-201ENSMUST00000186579 126 ntBASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 Gm28241-201ENSMUST00000190916 235 ntBASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 Gm38050-201ENSMUST00000191904 238 ntBASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 Gm38311-201ENSMUST00000192945 165 ntBASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 Gm8747-201ENSMUST00000195392 751 ntBASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 Gm43626-201ENSMUST00000198575 162 ntBASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 Gm43284-201ENSMUST00000200103 253 ntBASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 Igkv1-136-201ENSMUST00000200635 297 ntBASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 Gm19140-201ENSMUST00000209790 421 ntBASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 CT025606.1-201ENSMUST00000218273 324 ntBASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 AC115289.1-201ENSMUST00000224915 522 ntBASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 AC123656.2-201ENSMUST00000226726 227 ntBASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 AC122341.1-201ENSMUST00000227291 560 ntBASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 AC120553.1-201ENSMUST00000227313 260 ntBASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 Gm22364-201ENSMUST00000083097 98 ntBASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 Snord104-201ENSMUST00000083192 70 ntBASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 Gm23249-201ENSMUST00000083369 161 ntBASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 Gm23247-201ENSMUST00000083373 107 ntBASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 Mir181a-1-201ENSMUST00000083631 87 ntBASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 Gm25411-201ENSMUST00000083760 151 ntBASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 Gm5670-201ENSMUST00000093546 372 ntBASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.14□□□□□ -2.07
Ccdc36Q6PDM4 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Ccdc36Q6PDM4 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
Ccdc36Q6PDM4 Gm13343-201ENSMUST00000116474 105 ntBASIC2.13□□□□□ -2.07
Ccdc36Q6PDM4 Gm24590-201ENSMUST00000116699 119 ntBASIC2.13□□□□□ -2.07
Ccdc36Q6PDM4 Gm12156-201ENSMUST00000119188 554 ntBASIC2.13□□□□□ -2.07
Ccdc36Q6PDM4 Gm12806-201ENSMUST00000119384 268 ntBASIC2.13□□□□□ -2.07
Ccdc36Q6PDM4 Gm15760-201ENSMUST00000119553 283 ntBASIC2.13□□□□□ -2.07
Ccdc36Q6PDM4 DQ267100-201ENSMUST00000122600 72 ntBASIC2.13□□□□□ -2.07
Ccdc36Q6PDM4 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC2.13□□□□□ -2.07
Ccdc36Q6PDM4 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC2.13□□□□□ -2.07
Ccdc36Q6PDM4 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC2.13□□□□□ -2.07
Ccdc36Q6PDM4 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC2.13□□□□□ -2.07
Ccdc36Q6PDM4 Gm22141-201ENSMUST00000157403 277 ntBASIC2.13□□□□□ -2.07
Ccdc36Q6PDM4 Gm25434-201ENSMUST00000158278 167 ntBASIC2.13□□□□□ -2.07
Ccdc36Q6PDM4 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Ccdc36Q6PDM4 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC2.13□□□□□ -2.07
Ccdc36Q6PDM4 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.13□□□□□ -2.07
Ccdc36Q6PDM4 AC154296.1-201ENSMUST00000198150 67 ntBASIC2.13□□□□□ -2.07
Ccdc36Q6PDM4 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.13□□□□□ -2.07
Ccdc36Q6PDM4 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC2.13□□□□□ -2.07
Ccdc36Q6PDM4 Gm45445-201ENSMUST00000209586 232 ntBASIC2.13□□□□□ -2.07
Ccdc36Q6PDM4 AC109212.1-201ENSMUST00000215561 427 ntBASIC2.13□□□□□ -2.07
Ccdc36Q6PDM4 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.13□□□□□ -2.07
Ccdc36Q6PDM4 AC154603.1-201ENSMUST00000224355 313 ntBASIC2.13□□□□□ -2.07
Ccdc36Q6PDM4 AC113031.5-201ENSMUST00000227116 606 ntBASIC2.13□□□□□ -2.07
Ccdc36Q6PDM4 AC112935.1-201ENSMUST00000227603 250 ntBASIC2.13□□□□□ -2.07
Ccdc36Q6PDM4 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.13□□□□□ -2.07
Ccdc36Q6PDM4 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Ccdc36Q6PDM4 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Ccdc36Q6PDM4 Gm26228-201ENSMUST00000082512 107 ntBASIC2.13□□□□□ -2.07
Ccdc36Q6PDM4 Gm25080-201ENSMUST00000082526 107 ntBASIC2.13□□□□□ -2.07
Ccdc36Q6PDM4 Gm23515-201ENSMUST00000082829 107 ntBASIC2.13□□□□□ -2.07
Ccdc36Q6PDM4 Gm24765-201ENSMUST00000083691 103 ntBASIC2.13□□□□□ -2.07
Ccdc36Q6PDM4 Gm25518-201ENSMUST00000083864 107 ntBASIC2.13□□□□□ -2.07
Ccdc36Q6PDM4 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Ccdc36Q6PDM4 Gm650-201ENSMUST00000144428 1551 ntBASIC2.13□□□□□ -2.07
Ccdc36Q6PDM4 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
Ccdc36Q6PDM4 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Ccdc36Q6PDM4 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.12□□□□□ -2.07
Ccdc36Q6PDM4 Gm25407-201ENSMUST00000104102 134 ntBASIC2.12□□□□□ -2.07
Ccdc36Q6PDM4 Gm22656-201ENSMUST00000104199 171 ntBASIC2.12□□□□□ -2.07
Ccdc36Q6PDM4 Gm23128-201ENSMUST00000104257 132 ntBASIC2.12□□□□□ -2.07
Ccdc36Q6PDM4 Gm15175-201ENSMUST00000117629 132 ntBASIC2.12□□□□□ -2.07
Ccdc36Q6PDM4 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC2.12□□□□□ -2.07
Ccdc36Q6PDM4 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC2.12□□□□□ -2.07
Ccdc36Q6PDM4 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC2.12□□□□□ -2.07
Ccdc36Q6PDM4 Gm26105-201ENSMUST00000157253 190 ntBASIC2.12□□□□□ -2.07
Ccdc36Q6PDM4 Gm25280-201ENSMUST00000157269 101 ntBASIC2.12□□□□□ -2.07
Ccdc36Q6PDM4 Gm23642-201ENSMUST00000157858 258 ntBASIC2.12□□□□□ -2.07
Ccdc36Q6PDM4 Gm24958-201ENSMUST00000158009 97 ntBASIC2.12□□□□□ -2.07
Ccdc36Q6PDM4 Gm8580-201ENSMUST00000160295 464 ntBASIC2.12□□□□□ -2.07
Ccdc36Q6PDM4 Gm23402-201ENSMUST00000178130 107 ntBASIC2.12□□□□□ -2.07
Ccdc36Q6PDM4 Gm25361-201ENSMUST00000179358 76 ntBASIC2.12□□□□□ -2.07
Ccdc36Q6PDM4 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms