Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Gm14816-201ENSMUST00000117174 294 ntBASIC3.8□□□□□ -1.8
Cpsf6Q6NVF9 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC3.8□□□□□ -1.8
Cpsf6Q6NVF9 Gm12884-201ENSMUST00000120371 325 ntBASIC3.8□□□□□ -1.8
Cpsf6Q6NVF9 Gm25104-201ENSMUST00000122476 163 ntBASIC3.8□□□□□ -1.8
Cpsf6Q6NVF9 Gm26027-201ENSMUST00000122725 268 ntBASIC3.8□□□□□ -1.8
Cpsf6Q6NVF9 Gm22883-201ENSMUST00000157376 106 ntBASIC3.8□□□□□ -1.8
Cpsf6Q6NVF9 Gm25424-201ENSMUST00000157612 58 ntBASIC3.8□□□□□ -1.8
Cpsf6Q6NVF9 Gm2862-201ENSMUST00000161524 328 ntBASIC3.8□□□□□ -1.8
Cpsf6Q6NVF9 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Cpsf6Q6NVF9 Gm23799-201ENSMUST00000175559 120 ntBASIC3.8□□□□□ -1.8
Cpsf6Q6NVF9 Gm22756-201ENSMUST00000180118 107 ntBASIC3.8□□□□□ -1.8
Cpsf6Q6NVF9 Gm7497-201ENSMUST00000183064 1003 ntBASIC3.8□□□□□ -1.8
Cpsf6Q6NVF9 Gm37361-201ENSMUST00000194345 132 ntBASIC3.8□□□□□ -1.8
Cpsf6Q6NVF9 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC3.8□□□□□ -1.8
Cpsf6Q6NVF9 Gm18617-201ENSMUST00000222311 259 ntBASIC3.8□□□□□ -1.8
Cpsf6Q6NVF9 Gm22247-201ENSMUST00000082476 131 ntBASIC3.8□□□□□ -1.8
Cpsf6Q6NVF9 Gm26054-201ENSMUST00000083037 107 ntBASIC3.8□□□□□ -1.8
Cpsf6Q6NVF9 Gm24492-201ENSMUST00000083798 107 ntBASIC3.8□□□□□ -1.8
Cpsf6Q6NVF9 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Cpsf6Q6NVF9 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Cpsf6Q6NVF9 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Cpsf6Q6NVF9 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Cpsf6Q6NVF9 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Cpsf6Q6NVF9 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Cpsf6Q6NVF9 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC3.79□□□□□ -1.8
Cpsf6Q6NVF9 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Cpsf6Q6NVF9 Gm26273-201ENSMUST00000104180 131 ntBASIC3.79□□□□□ -1.8
Cpsf6Q6NVF9 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC3.79□□□□□ -1.8
Cpsf6Q6NVF9 Gm13852-201ENSMUST00000122350 242 ntBASIC3.79□□□□□ -1.8
Cpsf6Q6NVF9 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.79□□□□□ -1.8
Cpsf6Q6NVF9 Gm26275-201ENSMUST00000157101 268 ntBASIC3.79□□□□□ -1.8
Cpsf6Q6NVF9 Gm24720-201ENSMUST00000157518 166 ntBASIC3.79□□□□□ -1.8
Cpsf6Q6NVF9 Gm23753-201ENSMUST00000157575 149 ntBASIC3.79□□□□□ -1.8
Cpsf6Q6NVF9 Gm23554-201ENSMUST00000157818 110 ntBASIC3.79□□□□□ -1.8
Cpsf6Q6NVF9 Gm26045-201ENSMUST00000157862 97 ntBASIC3.79□□□□□ -1.8
Cpsf6Q6NVF9 Gm24213-201ENSMUST00000158255 258 ntBASIC3.79□□□□□ -1.8
Cpsf6Q6NVF9 Gm23198-201ENSMUST00000158811 91 ntBASIC3.79□□□□□ -1.8
Cpsf6Q6NVF9 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.79□□□□□ -1.8
Cpsf6Q6NVF9 Mir6338-201ENSMUST00000183389 109 ntBASIC3.79□□□□□ -1.8
Cpsf6Q6NVF9 Gm27695-201ENSMUST00000184301 91 ntBASIC3.79□□□□□ -1.8
Cpsf6Q6NVF9 Gm29308-201ENSMUST00000188863 315 ntBASIC3.79□□□□□ -1.8
Cpsf6Q6NVF9 Gm28537-201ENSMUST00000189026 315 ntBASIC3.79□□□□□ -1.8
Cpsf6Q6NVF9 Gm29631-201ENSMUST00000191065 315 ntBASIC3.79□□□□□ -1.8
Cpsf6Q6NVF9 Gm37923-201ENSMUST00000191624 161 ntBASIC3.79□□□□□ -1.8
Cpsf6Q6NVF9 Gm43853-201ENSMUST00000197162 301 ntBASIC3.79□□□□□ -1.8
Cpsf6Q6NVF9 Gm44376-201ENSMUST00000197570 128 ntBASIC3.79□□□□□ -1.8
Cpsf6Q6NVF9 Gm17951-201ENSMUST00000198536 496 ntBASIC3.79□□□□□ -1.8
Cpsf6Q6NVF9 Gm43220-201ENSMUST00000199299 282 ntBASIC3.79□□□□□ -1.8
Cpsf6Q6NVF9 Gm44583-201ENSMUST00000207478 281 ntBASIC3.79□□□□□ -1.8
Cpsf6Q6NVF9 Gm45553-201ENSMUST00000209929 507 ntBASIC3.79□□□□□ -1.8
Cpsf6Q6NVF9 AC100209.2-201ENSMUST00000224461 451 ntBASIC3.79□□□□□ -1.8
Cpsf6Q6NVF9 AC165415.1-201ENSMUST00000228924 273 ntBASIC3.79□□□□□ -1.8
Cpsf6Q6NVF9 Mir370-201ENSMUST00000083499 79 ntBASIC3.79□□□□□ -1.8
Cpsf6Q6NVF9 AC154462.1-201ENSMUST00000228897 2260 ntBASIC3.79□□□□□ -1.8
Cpsf6Q6NVF9 Gm10484-201ENSMUST00000196372 4759 ntBASIC3.79□□□□□ -1.8
Cpsf6Q6NVF9 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Cpsf6Q6NVF9 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
Cpsf6Q6NVF9 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Cpsf6Q6NVF9 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Cpsf6Q6NVF9 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Cpsf6Q6NVF9 Gm43009-201ENSMUST00000199979 3566 ntBASIC3.78□□□□□ -1.8
Cpsf6Q6NVF9 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.78□□□□□ -1.8
Cpsf6Q6NVF9 Gm4736-201ENSMUST00000100870 380 ntBASIC3.78□□□□□ -1.8
Cpsf6Q6NVF9 Mir872-201ENSMUST00000104728 81 ntBASIC3.78□□□□□ -1.8
Cpsf6Q6NVF9 Gm23905-201ENSMUST00000157568 109 ntBASIC3.78□□□□□ -1.8
Cpsf6Q6NVF9 Gm22531-201ENSMUST00000158819 140 ntBASIC3.78□□□□□ -1.8
Cpsf6Q6NVF9 Gm5967-201ENSMUST00000172723 494 ntBASIC3.78□□□□□ -1.8
Cpsf6Q6NVF9 Gm22395-201ENSMUST00000177427 96 ntBASIC3.78□□□□□ -1.8
Cpsf6Q6NVF9 Gm27220-201ENSMUST00000183453 262 ntBASIC3.78□□□□□ -1.8
Cpsf6Q6NVF9 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC3.78□□□□□ -1.8
Cpsf6Q6NVF9 Gm8790-201ENSMUST00000194108 322 ntBASIC3.78□□□□□ -1.8
Cpsf6Q6NVF9 Gm44354-201ENSMUST00000196017 143 ntBASIC3.78□□□□□ -1.8
Cpsf6Q6NVF9 Gm4248-201ENSMUST00000196905 316 ntBASIC3.78□□□□□ -1.8
Cpsf6Q6NVF9 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.78□□□□□ -1.8
Cpsf6Q6NVF9 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.78□□□□□ -1.8
Cpsf6Q6NVF9 AC122242.1-201ENSMUST00000224650 304 ntBASIC3.78□□□□□ -1.8
Cpsf6Q6NVF9 Gm24164-201ENSMUST00000093663 104 ntBASIC3.78□□□□□ -1.8
Cpsf6Q6NVF9 Gm37498-201ENSMUST00000193524 4002 ntBASIC3.78□□□□□ -1.8
Cpsf6Q6NVF9 Gm12010-201ENSMUST00000122400 2017 ntBASIC3.78□□□□□ -1.8
Cpsf6Q6NVF9 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Cpsf6Q6NVF9 AC154548.1-201ENSMUST00000225844 3838 ntBASIC3.78□□□□□ -1.8
Cpsf6Q6NVF9 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
Cpsf6Q6NVF9 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
Cpsf6Q6NVF9 Gm42447-201ENSMUST00000200102 2903 ntBASIC3.77□□□□□ -1.81
Cpsf6Q6NVF9 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Cpsf6Q6NVF9 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.77□□□□□ -1.81
Cpsf6Q6NVF9 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Cpsf6Q6NVF9 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Cpsf6Q6NVF9 Gm22778-201ENSMUST00000104090 128 ntBASIC3.77□□□□□ -1.81
Cpsf6Q6NVF9 Gm11566-201ENSMUST00000118550 203 ntBASIC3.77□□□□□ -1.81
Cpsf6Q6NVF9 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Cpsf6Q6NVF9 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC3.77□□□□□ -1.81
Cpsf6Q6NVF9 Gm23536-201ENSMUST00000157541 134 ntBASIC3.77□□□□□ -1.81
Cpsf6Q6NVF9 Gm23586-201ENSMUST00000157657 123 ntBASIC3.77□□□□□ -1.81
Cpsf6Q6NVF9 Gm22211-201ENSMUST00000158097 156 ntBASIC3.77□□□□□ -1.81
Cpsf6Q6NVF9 Gm27611-201ENSMUST00000184690 108 ntBASIC3.77□□□□□ -1.81
Cpsf6Q6NVF9 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC3.77□□□□□ -1.81
Cpsf6Q6NVF9 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Cpsf6Q6NVF9 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
Cpsf6Q6NVF9 Gm44521-201ENSMUST00000206469 217 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 157.9 ms