Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
Tpm4Q6IRU2 Gm37743-201ENSMUST00000194645 376 ntBASIC1.53□□□□□ -2.16
Tpm4Q6IRU2 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.53□□□□□ -2.16
Tpm4Q6IRU2 Gm31520-201ENSMUST00000203048 733 ntBASIC1.53□□□□□ -2.16
Tpm4Q6IRU2 Gm43924-201ENSMUST00000204851 1736 ntBASIC1.53□□□□□ -2.16
Tpm4Q6IRU2 Gm45071-201ENSMUST00000205353 571 ntBASIC1.53□□□□□ -2.16
Tpm4Q6IRU2 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
Tpm4Q6IRU2 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC1.53□□□□□ -2.16
Tpm4Q6IRU2 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
Tpm4Q6IRU2 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
Tpm4Q6IRU2 Mir883a-201ENSMUST00000104824 76 ntBASIC1.52□□□□□ -2.17
Tpm4Q6IRU2 Mdga2-203ENSMUST00000113942 423 ntBASIC1.52□□□□□ -2.17
Tpm4Q6IRU2 Gm12393-201ENSMUST00000117084 848 ntBASIC1.52□□□□□ -2.17
Tpm4Q6IRU2 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC1.52□□□□□ -2.17
Tpm4Q6IRU2 Gm23048-201ENSMUST00000157237 129 ntBASIC1.52□□□□□ -2.17
Tpm4Q6IRU2 Gm23754-201ENSMUST00000157576 63 ntBASIC1.52□□□□□ -2.17
Tpm4Q6IRU2 Gm24394-201ENSMUST00000158141 123 ntBASIC1.52□□□□□ -2.17
Tpm4Q6IRU2 Gm22764-201ENSMUST00000158370 92 ntBASIC1.52□□□□□ -2.17
Tpm4Q6IRU2 Gm22527-201ENSMUST00000158816 106 ntBASIC1.52□□□□□ -2.17
Tpm4Q6IRU2 Gm17062-201ENSMUST00000166987 461 ntBASIC1.52□□□□□ -2.17
Tpm4Q6IRU2 Gm25958-201ENSMUST00000175114 71 ntBASIC1.52□□□□□ -2.17
Tpm4Q6IRU2 Gm27428-201ENSMUST00000184289 110 ntBASIC1.52□□□□□ -2.17
Tpm4Q6IRU2 Gm28000-201ENSMUST00000184380 85 ntBASIC1.52□□□□□ -2.17
Tpm4Q6IRU2 Gm37684-201ENSMUST00000192779 355 ntBASIC1.52□□□□□ -2.17
Tpm4Q6IRU2 Gm43402-201ENSMUST00000197159 159 ntBASIC1.52□□□□□ -2.17
Tpm4Q6IRU2 Gm25820-202ENSMUST00000197479 128 ntBASIC1.52□□□□□ -2.17
Tpm4Q6IRU2 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Tpm4Q6IRU2 Gm44024-201ENSMUST00000203008 476 ntBASIC1.52□□□□□ -2.17
Tpm4Q6IRU2 Gm45912-201ENSMUST00000210646 543 ntBASIC1.52□□□□□ -2.17
Tpm4Q6IRU2 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.52□□□□□ -2.17
Tpm4Q6IRU2 AC133517.1-203ENSMUST00000225570 390 ntBASIC1.52□□□□□ -2.17
Tpm4Q6IRU2 Gm24805-201ENSMUST00000082931 104 ntBASIC1.52□□□□□ -2.17
Tpm4Q6IRU2 Gm22265-201ENSMUST00000082947 116 ntBASIC1.52□□□□□ -2.17
Tpm4Q6IRU2 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Tpm4Q6IRU2 AC117226.1-201ENSMUST00000221635 3737 ntBASIC1.52□□□□□ -2.17
Tpm4Q6IRU2 Gm22779-201ENSMUST00000104085 107 ntBASIC1.51□□□□□ -2.17
Tpm4Q6IRU2 Gm22091-201ENSMUST00000116908 127 ntBASIC1.51□□□□□ -2.17
Tpm4Q6IRU2 Anp32-ps-201ENSMUST00000118265 388 ntBASIC1.51□□□□□ -2.17
Tpm4Q6IRU2 Gm12550-201ENSMUST00000118478 329 ntBASIC1.51□□□□□ -2.17
Tpm4Q6IRU2 Gm14554-201ENSMUST00000119548 661 ntBASIC1.51□□□□□ -2.17
Tpm4Q6IRU2 Gm22082-201ENSMUST00000157587 161 ntBASIC1.51□□□□□ -2.17
Tpm4Q6IRU2 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC1.51□□□□□ -2.17
Tpm4Q6IRU2 Ear-ps8-201ENSMUST00000161935 354 ntBASIC1.51□□□□□ -2.17
Tpm4Q6IRU2 Gm27964-201ENSMUST00000185195 62 ntBASIC1.51□□□□□ -2.17
Tpm4Q6IRU2 AL645546.2-201ENSMUST00000224526 265 ntBASIC1.51□□□□□ -2.17
Tpm4Q6IRU2 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
Tpm4Q6IRU2 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
Tpm4Q6IRU2 Gm10298-201ENSMUST00000074801 265 ntBASIC1.51□□□□□ -2.17
Tpm4Q6IRU2 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC1.51□□□□□ -2.17
Tpm4Q6IRU2 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Tpm4Q6IRU2 Gm22496-201ENSMUST00000104493 88 ntBASIC1.5□□□□□ -2.17
Tpm4Q6IRU2 Gm14943-201ENSMUST00000118056 546 ntBASIC1.5□□□□□ -2.17
Tpm4Q6IRU2 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Tpm4Q6IRU2 Gm24177-201ENSMUST00000158927 131 ntBASIC1.5□□□□□ -2.17
Tpm4Q6IRU2 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC1.5□□□□□ -2.17
Tpm4Q6IRU2 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC1.5□□□□□ -2.17
Tpm4Q6IRU2 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
Tpm4Q6IRU2 Gm21744-201ENSMUST00000178403 662 ntBASIC1.5□□□□□ -2.17
Tpm4Q6IRU2 Gm25175-201ENSMUST00000178712 79 ntBASIC1.5□□□□□ -2.17
Tpm4Q6IRU2 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC1.5□□□□□ -2.17
Tpm4Q6IRU2 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC1.5□□□□□ -2.17
Tpm4Q6IRU2 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC1.5□□□□□ -2.17
Tpm4Q6IRU2 Gm21171-201ENSMUST00000180048 673 ntBASIC1.5□□□□□ -2.17
Tpm4Q6IRU2 Mir6399-201ENSMUST00000184050 84 ntBASIC1.5□□□□□ -2.17
Tpm4Q6IRU2 Mir7017-201ENSMUST00000184894 62 ntBASIC1.5□□□□□ -2.17
Tpm4Q6IRU2 Gm29413-201ENSMUST00000186019 880 ntBASIC1.5□□□□□ -2.17
Tpm4Q6IRU2 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Tpm4Q6IRU2 Gm28700-201ENSMUST00000187614 579 ntBASIC1.5□□□□□ -2.17
Tpm4Q6IRU2 Gm29639-201ENSMUST00000188375 580 ntBASIC1.5□□□□□ -2.17
Tpm4Q6IRU2 Gm28843-201ENSMUST00000189198 678 ntBASIC1.5□□□□□ -2.17
Tpm4Q6IRU2 Gm28151-201ENSMUST00000189404 951 ntBASIC1.5□□□□□ -2.17
Tpm4Q6IRU2 Gm29546-201ENSMUST00000191171 678 ntBASIC1.5□□□□□ -2.17
Tpm4Q6IRU2 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC1.5□□□□□ -2.17
Tpm4Q6IRU2 Gm42739-201ENSMUST00000200687 226 ntBASIC1.5□□□□□ -2.17
Tpm4Q6IRU2 Gm44961-201ENSMUST00000207450 196 ntBASIC1.5□□□□□ -2.17
Tpm4Q6IRU2 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.5□□□□□ -2.17
Tpm4Q6IRU2 Gm35558-202ENSMUST00000221819 499 ntBASIC1.5□□□□□ -2.17
Tpm4Q6IRU2 AC121114.1-201ENSMUST00000228522 570 ntBASIC1.5□□□□□ -2.17
Tpm4Q6IRU2 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Tpm4Q6IRU2 Gm22974-201ENSMUST00000083301 103 ntBASIC1.5□□□□□ -2.17
Tpm4Q6IRU2 Gm23102-201ENSMUST00000083724 116 ntBASIC1.5□□□□□ -2.17
Tpm4Q6IRU2 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC1.5□□□□□ -2.17
Tpm4Q6IRU2 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.5□□□□□ -2.17
Tpm4Q6IRU2 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC1.5□□□□□ -2.17
Tpm4Q6IRU2 Gm14445-201ENSMUST00000117051 1484 ntBASIC1.5□□□□□ -2.17
Tpm4Q6IRU2 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Tpm4Q6IRU2 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC1.49□□□□□ -2.17
Tpm4Q6IRU2 Gm44562-201ENSMUST00000207194 1347 ntBASIC1.49□□□□□ -2.17
Tpm4Q6IRU2 Gm22936-201ENSMUST00000103955 126 ntBASIC1.49□□□□□ -2.17
Tpm4Q6IRU2 Gm12656-201ENSMUST00000118149 577 ntBASIC1.49□□□□□ -2.17
Tpm4Q6IRU2 Mup-ps14-201ENSMUST00000118437 532 ntBASIC1.49□□□□□ -2.17
Tpm4Q6IRU2 Gm14835-201ENSMUST00000119039 315 ntBASIC1.49□□□□□ -2.17
Tpm4Q6IRU2 Gm11359-201ENSMUST00000120039 567 ntBASIC1.49□□□□□ -2.17
Tpm4Q6IRU2 Mup-ps2-201ENSMUST00000142602 533 ntBASIC1.49□□□□□ -2.17
Tpm4Q6IRU2 Snord13-201ENSMUST00000157627 104 ntBASIC1.49□□□□□ -2.17
Tpm4Q6IRU2 Gm24601-201ENSMUST00000157970 143 ntBASIC1.49□□□□□ -2.17
Tpm4Q6IRU2 Gm24846-201ENSMUST00000158033 108 ntBASIC1.49□□□□□ -2.17
Tpm4Q6IRU2 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC1.49□□□□□ -2.17
Tpm4Q6IRU2 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC1.49□□□□□ -2.17
Tpm4Q6IRU2 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 119.1 ms