Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Gm25772-201ENSMUST00000158574 56 ntBASIC0.39□□□□□ -2.35
Col7a1Q63870 Gm25949-201ENSMUST00000175333 114 ntBASIC0.39□□□□□ -2.35
Col7a1Q63870 Gm27943-201ENSMUST00000184844 116 ntBASIC0.39□□□□□ -2.35
Col7a1Q63870 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC0.39□□□□□ -2.35
Col7a1Q63870 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC0.39□□□□□ -2.35
Col7a1Q63870 Gm2830-201ENSMUST00000140330 385 ntBASIC0.38□□□□□ -2.35
Col7a1Q63870 Mir1967-201ENSMUST00000157789 82 ntBASIC0.38□□□□□ -2.35
Col7a1Q63870 Gm20118-201ENSMUST00000187207 162 ntBASIC0.38□□□□□ -2.35
Col7a1Q63870 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC0.38□□□□□ -2.35
Col7a1Q63870 Gm3333-202ENSMUST00000221763 1044 ntBASIC0.38□□□□□ -2.35
Col7a1Q63870 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
Col7a1Q63870 Gm23723-201ENSMUST00000082996 132 ntBASIC0.38□□□□□ -2.35
Col7a1Q63870 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
Col7a1Q63870 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC0.38□□□□□ -2.35
Col7a1Q63870 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC0.38□□□□□ -2.35
Col7a1Q63870 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC0.38□□□□□ -2.35
Col7a1Q63870 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC0.38□□□□□ -2.35
Col7a1Q63870 Gm19540-201ENSMUST00000221843 810 ntBASIC0.38□□□□□ -2.35
Col7a1Q63870 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
Col7a1Q63870 Gm24319-201ENSMUST00000083389 107 ntBASIC0.38□□□□□ -2.35
Col7a1Q63870 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
Col7a1Q63870 Gm21754-201ENSMUST00000177550 479 ntBASIC0.37□□□□□ -2.35
Col7a1Q63870 Gm5709-201ENSMUST00000177879 1165 ntBASIC0.37□□□□□ -2.35
Col7a1Q63870 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC0.37□□□□□ -2.35
Col7a1Q63870 Gm14073-201ENSMUST00000117344 381 ntBASIC0.37□□□□□ -2.35
Col7a1Q63870 Gm25718-201ENSMUST00000158632 118 ntBASIC0.37□□□□□ -2.35
Col7a1Q63870 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC0.37□□□□□ -2.35
Col7a1Q63870 Gm43245-201ENSMUST00000197603 468 ntBASIC0.37□□□□□ -2.35
Col7a1Q63870 Gm18691-201ENSMUST00000203593 872 ntBASIC0.37□□□□□ -2.35
Col7a1Q63870 Gm19118-201ENSMUST00000222554 98 ntBASIC0.37□□□□□ -2.35
Col7a1Q63870 AC147545.1-201ENSMUST00000227528 108 ntBASIC0.37□□□□□ -2.35
Col7a1Q63870 Olfr197-201ENSMUST00000080031 926 ntBASIC0.37□□□□□ -2.35
Col7a1Q63870 Mir301-201ENSMUST00000083655 86 ntBASIC0.37□□□□□ -2.35
Col7a1Q63870 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC0.37□□□□□ -2.35
Col7a1Q63870 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC0.37□□□□□ -2.35
Col7a1Q63870 Gm22270-201ENSMUST00000104034 132 ntBASIC0.37□□□□□ -2.35
Col7a1Q63870 Gm14940-201ENSMUST00000119309 495 ntBASIC0.37□□□□□ -2.35
Col7a1Q63870 AC151907.1-201ENSMUST00000228812 412 ntBASIC0.37□□□□□ -2.35
Col7a1Q63870 Gm24256-201ENSMUST00000083696 84 ntBASIC0.37□□□□□ -2.35
Col7a1Q63870 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
Col7a1Q63870 Gm28872-201ENSMUST00000191518 158 ntBASIC0.36□□□□□ -2.35
Col7a1Q63870 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC0.36□□□□□ -2.35
Col7a1Q63870 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC0.36□□□□□ -2.35
Col7a1Q63870 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC0.36□□□□□ -2.35
Col7a1Q63870 Gm18854-201ENSMUST00000211196 329 ntBASIC0.36□□□□□ -2.35
Col7a1Q63870 AC159709.1-201ENSMUST00000220445 349 ntBASIC0.36□□□□□ -2.35
Col7a1Q63870 AC154328.1-201ENSMUST00000225875 307 ntBASIC0.36□□□□□ -2.35
Col7a1Q63870 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
Col7a1Q63870 Gm13085-201ENSMUST00000118356 171 ntBASIC0.36□□□□□ -2.35
Col7a1Q63870 Gm11784-201ENSMUST00000118568 474 ntBASIC0.36□□□□□ -2.35
Col7a1Q63870 Gm38113-201ENSMUST00000193704 201 ntBASIC0.36□□□□□ -2.35
Col7a1Q63870 Gm43974-201ENSMUST00000205080 684 ntBASIC0.36□□□□□ -2.35
Col7a1Q63870 Gm23452-201ENSMUST00000083327 107 ntBASIC0.36□□□□□ -2.35
Col7a1Q63870 Gm44679-201ENSMUST00000207202 2908 ntBASIC0.36□□□□□ -2.35
Col7a1Q63870 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
Col7a1Q63870 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC0.36□□□□□ -2.35
Col7a1Q63870 Gm16186-201ENSMUST00000120132 216 ntBASIC0.35□□□□□ -2.35
Col7a1Q63870 Gm4916-201ENSMUST00000126139 642 ntBASIC0.35□□□□□ -2.35
Col7a1Q63870 Gm24777-201ENSMUST00000157644 107 ntBASIC0.35□□□□□ -2.35
Col7a1Q63870 Gm24549-201ENSMUST00000158647 139 ntBASIC0.35□□□□□ -2.35
Col7a1Q63870 Gm5309-201ENSMUST00000197416 677 ntBASIC0.35□□□□□ -2.35
Col7a1Q63870 Gm42824-201ENSMUST00000199361 247 ntBASIC0.35□□□□□ -2.35
Col7a1Q63870 Gm44348-201ENSMUST00000200165 122 ntBASIC0.35□□□□□ -2.35
Col7a1Q63870 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC0.35□□□□□ -2.35
Col7a1Q63870 AC142113.2-201ENSMUST00000217425 748 ntBASIC0.35□□□□□ -2.35
Col7a1Q63870 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
Col7a1Q63870 Gm22595-201ENSMUST00000104250 130 ntBASIC0.35□□□□□ -2.35
Col7a1Q63870 Gm14979-201ENSMUST00000121561 1035 ntBASIC0.35□□□□□ -2.35
Col7a1Q63870 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC0.35□□□□□ -2.35
Col7a1Q63870 Gm19237-201ENSMUST00000205036 1132 ntBASIC0.35□□□□□ -2.35
Col7a1Q63870 Gm19599-201ENSMUST00000218898 358 ntBASIC0.35□□□□□ -2.35
Col7a1Q63870 Snora3-201ENSMUST00000083082 132 ntBASIC0.35□□□□□ -2.35
Col7a1Q63870 Gm36989-201ENSMUST00000193225 2160 ntBASIC0.34□□□□□ -2.35
Col7a1Q63870 Gm2003-201ENSMUST00000118537 636 ntBASIC0.34□□□□□ -2.35
Col7a1Q63870 Gm25543-201ENSMUST00000122678 312 ntBASIC0.34□□□□□ -2.35
Col7a1Q63870 Gm25669-201ENSMUST00000157699 112 ntBASIC0.34□□□□□ -2.35
Col7a1Q63870 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC0.34□□□□□ -2.35
Col7a1Q63870 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC0.34□□□□□ -2.35
Col7a1Q63870 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC0.34□□□□□ -2.35
Col7a1Q63870 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC0.34□□□□□ -2.35
Col7a1Q63870 Gm44656-201ENSMUST00000208428 490 ntBASIC0.34□□□□□ -2.35
Col7a1Q63870 AL662807.1-201ENSMUST00000224183 126 ntBASIC0.34□□□□□ -2.35
Col7a1Q63870 Gm15213-201ENSMUST00000122098 216 ntBASIC0.34□□□□□ -2.36
Col7a1Q63870 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC0.34□□□□□ -2.36
Col7a1Q63870 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
Col7a1Q63870 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC0.34□□□□□ -2.36
Col7a1Q63870 Gm28779-201ENSMUST00000189678 323 ntBASIC0.34□□□□□ -2.36
Col7a1Q63870 Gm31511-201ENSMUST00000193134 657 ntBASIC0.34□□□□□ -2.36
Col7a1Q63870 Gm19202-201ENSMUST00000198096 808 ntBASIC0.34□□□□□ -2.36
Col7a1Q63870 Gm45207-201ENSMUST00000207469 145 ntBASIC0.34□□□□□ -2.36
Col7a1Q63870 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
Col7a1Q63870 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
Col7a1Q63870 Gm25802-201ENSMUST00000082639 77 ntBASIC0.34□□□□□ -2.36
Col7a1Q63870 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
Col7a1Q63870 Gm14731-201ENSMUST00000119216 376 ntBASIC0.34□□□□□ -2.36
Col7a1Q63870 Gm1989-201ENSMUST00000126244 636 ntBASIC0.34□□□□□ -2.36
Col7a1Q63870 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC0.34□□□□□ -2.36
Col7a1Q63870 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC0.34□□□□□ -2.36
Col7a1Q63870 Snord35a-201ENSMUST00000083884 90 ntBASIC0.34□□□□□ -2.36
Col7a1Q63870 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC0.33□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms