Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Gm24122-201ENSMUST00000104107 132 ntBASIC2.41□□□□□ -2.02
Six1Q62231 n-R5s202-201ENSMUST00000104517 114 ntBASIC2.41□□□□□ -2.02
Six1Q62231 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC2.41□□□□□ -2.02
Six1Q62231 Gm13913-201ENSMUST00000121126 260 ntBASIC2.41□□□□□ -2.02
Six1Q62231 Gm14736-201ENSMUST00000121470 336 ntBASIC2.41□□□□□ -2.02
Six1Q62231 Gm13901-201ENSMUST00000137252 468 ntBASIC2.41□□□□□ -2.02
Six1Q62231 Gm25910-201ENSMUST00000157620 140 ntBASIC2.41□□□□□ -2.02
Six1Q62231 Gm24959-201ENSMUST00000157924 146 ntBASIC2.41□□□□□ -2.02
Six1Q62231 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Six1Q62231 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC2.41□□□□□ -2.02
Six1Q62231 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Six1Q62231 Mir5136-201ENSMUST00000175573 76 ntBASIC2.41□□□□□ -2.02
Six1Q62231 Gm18588-201ENSMUST00000177308 492 ntBASIC2.41□□□□□ -2.02
Six1Q62231 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Six1Q62231 Gm23523-201ENSMUST00000180190 107 ntBASIC2.41□□□□□ -2.02
Six1Q62231 Gm23862-201ENSMUST00000180342 94 ntBASIC2.41□□□□□ -2.02
Six1Q62231 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Six1Q62231 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Six1Q62231 Mir6335-201ENSMUST00000184081 98 ntBASIC2.41□□□□□ -2.02
Six1Q62231 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Six1Q62231 Gm27588-201ENSMUST00000185096 263 ntBASIC2.41□□□□□ -2.02
Six1Q62231 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC2.41□□□□□ -2.02
Six1Q62231 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Six1Q62231 Gm37455-201ENSMUST00000191993 529 ntBASIC2.41□□□□□ -2.02
Six1Q62231 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC2.41□□□□□ -2.02
Six1Q62231 Gm43884-201ENSMUST00000204251 559 ntBASIC2.41□□□□□ -2.02
Six1Q62231 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC2.41□□□□□ -2.02
Six1Q62231 AC166358.10-201ENSMUST00000220556 144 ntBASIC2.41□□□□□ -2.02
Six1Q62231 CT009713.6-201ENSMUST00000223615 294 ntBASIC2.41□□□□□ -2.02
Six1Q62231 Gm24661-201ENSMUST00000083205 104 ntBASIC2.41□□□□□ -2.02
Six1Q62231 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
Six1Q62231 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Six1Q62231 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC2.4□□□□□ -2.03
Six1Q62231 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Six1Q62231 Gm22782-201ENSMUST00000104082 132 ntBASIC2.4□□□□□ -2.03
Six1Q62231 Gm22674-201ENSMUST00000104413 131 ntBASIC2.4□□□□□ -2.03
Six1Q62231 Gm15106-201ENSMUST00000119691 821 ntBASIC2.4□□□□□ -2.03
Six1Q62231 Gm11834-201ENSMUST00000122257 585 ntBASIC2.4□□□□□ -2.03
Six1Q62231 Gm13424-201ENSMUST00000122301 354 ntBASIC2.4□□□□□ -2.03
Six1Q62231 Gm24937-201ENSMUST00000122597 134 ntBASIC2.4□□□□□ -2.03
Six1Q62231 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.4□□□□□ -2.03
Six1Q62231 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC2.4□□□□□ -2.03
Six1Q62231 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC2.4□□□□□ -2.03
Six1Q62231 Gm25220-201ENSMUST00000157546 95 ntBASIC2.4□□□□□ -2.03
Six1Q62231 Gm26406-201ENSMUST00000158503 124 ntBASIC2.4□□□□□ -2.03
Six1Q62231 Gm22136-201ENSMUST00000158751 268 ntBASIC2.4□□□□□ -2.03
Six1Q62231 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Six1Q62231 Gm27921-201ENSMUST00000183968 108 ntBASIC2.4□□□□□ -2.03
Six1Q62231 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.4□□□□□ -2.03
Six1Q62231 Gm29429-201ENSMUST00000187071 121 ntBASIC2.4□□□□□ -2.03
Six1Q62231 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC2.4□□□□□ -2.03
Six1Q62231 Gm18551-201ENSMUST00000195594 642 ntBASIC2.4□□□□□ -2.03
Six1Q62231 Gm42647-201ENSMUST00000195939 459 ntBASIC2.4□□□□□ -2.03
Six1Q62231 Gm5034-201ENSMUST00000199115 634 ntBASIC2.4□□□□□ -2.03
Six1Q62231 Gm34783-201ENSMUST00000209159 303 ntBASIC2.4□□□□□ -2.03
Six1Q62231 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.4□□□□□ -2.03
Six1Q62231 AC159188.1-201ENSMUST00000225198 526 ntBASIC2.4□□□□□ -2.03
Six1Q62231 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC2.4□□□□□ -2.03
Six1Q62231 Gm3867-201ENSMUST00000086108 279 ntBASIC2.4□□□□□ -2.03
Six1Q62231 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Six1Q62231 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Six1Q62231 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.4□□□□□ -2.03
Six1Q62231 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Six1Q62231 Gm20172-201ENSMUST00000193138 1551 ntBASIC2.4□□□□□ -2.03
Six1Q62231 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
Six1Q62231 Gm11386-201ENSMUST00000117761 347 ntBASIC2.39□□□□□ -2.03
Six1Q62231 Gm12071-201ENSMUST00000121968 469 ntBASIC2.39□□□□□ -2.03
Six1Q62231 Gm23886-201ENSMUST00000122684 313 ntBASIC2.39□□□□□ -2.03
Six1Q62231 Gm24922-201ENSMUST00000158511 102 ntBASIC2.39□□□□□ -2.03
Six1Q62231 Mir1927-201ENSMUST00000158579 109 ntBASIC2.39□□□□□ -2.03
Six1Q62231 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC2.39□□□□□ -2.03
Six1Q62231 Gm16561-201ENSMUST00000163001 192 ntBASIC2.39□□□□□ -2.03
Six1Q62231 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC2.39□□□□□ -2.03
Six1Q62231 Gm24086-201ENSMUST00000175171 98 ntBASIC2.39□□□□□ -2.03
Six1Q62231 Mir3076-201ENSMUST00000175415 60 ntBASIC2.39□□□□□ -2.03
Six1Q62231 Gm20660-201ENSMUST00000177515 289 ntBASIC2.39□□□□□ -2.03
Six1Q62231 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Six1Q62231 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Six1Q62231 Gm29658-201ENSMUST00000185404 230 ntBASIC2.39□□□□□ -2.03
Six1Q62231 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Six1Q62231 Ighv1-32-201ENSMUST00000195149 351 ntBASIC2.39□□□□□ -2.03
Six1Q62231 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC2.39□□□□□ -2.03
Six1Q62231 Gm44718-201ENSMUST00000206886 359 ntBASIC2.39□□□□□ -2.03
Six1Q62231 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC2.39□□□□□ -2.03
Six1Q62231 Gm18854-201ENSMUST00000211196 329 ntBASIC2.39□□□□□ -2.03
Six1Q62231 AC147101.1-201ENSMUST00000217964 312 ntBASIC2.39□□□□□ -2.03
Six1Q62231 AC158803.1-201ENSMUST00000219495 316 ntBASIC2.39□□□□□ -2.03
Six1Q62231 Gm24037-201ENSMUST00000082871 180 ntBASIC2.39□□□□□ -2.03
Six1Q62231 Gm23242-201ENSMUST00000083055 107 ntBASIC2.39□□□□□ -2.03
Six1Q62231 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
Six1Q62231 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Six1Q62231 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC2.39□□□□□ -2.03
Six1Q62231 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Six1Q62231 Gm43230-201ENSMUST00000200980 2129 ntBASIC2.38□□□□□ -2.03
Six1Q62231 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Six1Q62231 Gm22656-201ENSMUST00000104199 171 ntBASIC2.38□□□□□ -2.03
Six1Q62231 Gm23803-201ENSMUST00000104610 132 ntBASIC2.38□□□□□ -2.03
Six1Q62231 Gm12386-201ENSMUST00000117380 688 ntBASIC2.38□□□□□ -2.03
Six1Q62231 Gm24780-201ENSMUST00000157635 143 ntBASIC2.38□□□□□ -2.03
Six1Q62231 Gm23411-201ENSMUST00000157988 62 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 108.7 ms