Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm11065-201ENSMUST00000111462 228 ntBASIC3.32□□□□□ -1.88
Ift88Q61371 Gm13876-201ENSMUST00000118451 261 ntBASIC3.32□□□□□ -1.88
Ift88Q61371 Gm15190-201ENSMUST00000120855 276 ntBASIC3.32□□□□□ -1.88
Ift88Q61371 Mir1898-201ENSMUST00000122643 83 ntBASIC3.32□□□□□ -1.88
Ift88Q61371 Gm23886-201ENSMUST00000122684 313 ntBASIC3.32□□□□□ -1.88
Ift88Q61371 Gm22380-201ENSMUST00000157479 95 ntBASIC3.32□□□□□ -1.88
Ift88Q61371 Gm24505-201ENSMUST00000157682 126 ntBASIC3.32□□□□□ -1.88
Ift88Q61371 Gm22101-201ENSMUST00000157928 103 ntBASIC3.32□□□□□ -1.88
Ift88Q61371 Gm24225-201ENSMUST00000158825 98 ntBASIC3.32□□□□□ -1.88
Ift88Q61371 Gm28000-201ENSMUST00000184380 85 ntBASIC3.32□□□□□ -1.88
Ift88Q61371 Gm27332-201ENSMUST00000184893 112 ntBASIC3.32□□□□□ -1.88
Ift88Q61371 Gm38238-201ENSMUST00000194334 346 ntBASIC3.32□□□□□ -1.88
Ift88Q61371 Gm37417-201ENSMUST00000195257 454 ntBASIC3.32□□□□□ -1.88
Ift88Q61371 Gm43704-201ENSMUST00000196164 496 ntBASIC3.32□□□□□ -1.88
Ift88Q61371 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC3.32□□□□□ -1.88
Ift88Q61371 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC3.32□□□□□ -1.88
Ift88Q61371 Gm44519-201ENSMUST00000206486 122 ntBASIC3.32□□□□□ -1.88
Ift88Q61371 Gm45513-201ENSMUST00000210228 376 ntBASIC3.32□□□□□ -1.88
Ift88Q61371 AC138290.2-201ENSMUST00000218822 369 ntBASIC3.32□□□□□ -1.88
Ift88Q61371 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC3.32□□□□□ -1.88
Ift88Q61371 AC164297.3-201ENSMUST00000224238 94 ntBASIC3.32□□□□□ -1.88
Ift88Q61371 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC3.32□□□□□ -1.88
Ift88Q61371 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Ift88Q61371 Gm25202-201ENSMUST00000082838 191 ntBASIC3.32□□□□□ -1.88
Ift88Q61371 Gm5596-201ENSMUST00000207988 2421 ntBASIC3.32□□□□□ -1.88
Ift88Q61371 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.32□□□□□ -1.88
Ift88Q61371 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.31□□□□□ -1.88
Ift88Q61371 Gm24119-201ENSMUST00000103979 246 ntBASIC3.31□□□□□ -1.88
Ift88Q61371 Gm22779-201ENSMUST00000104085 107 ntBASIC3.31□□□□□ -1.88
Ift88Q61371 Gm25727-201ENSMUST00000104522 131 ntBASIC3.31□□□□□ -1.88
Ift88Q61371 Gm13396-201ENSMUST00000120617 271 ntBASIC3.31□□□□□ -1.88
Ift88Q61371 Gm6956-201ENSMUST00000134724 546 ntBASIC3.31□□□□□ -1.88
Ift88Q61371 Gm16358-201ENSMUST00000146046 210 ntBASIC3.31□□□□□ -1.88
Ift88Q61371 Gm27926-201ENSMUST00000157180 66 ntBASIC3.31□□□□□ -1.88
Ift88Q61371 Gm24481-201ENSMUST00000157210 102 ntBASIC3.31□□□□□ -1.88
Ift88Q61371 Gm25427-201ENSMUST00000157605 103 ntBASIC3.31□□□□□ -1.88
Ift88Q61371 Gm24745-201ENSMUST00000157840 85 ntBASIC3.31□□□□□ -1.88
Ift88Q61371 Gm23779-201ENSMUST00000157938 64 ntBASIC3.31□□□□□ -1.88
Ift88Q61371 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC3.31□□□□□ -1.88
Ift88Q61371 Mir6975-201ENSMUST00000184879 61 ntBASIC3.31□□□□□ -1.88
Ift88Q61371 Gm1833-201ENSMUST00000191608 682 ntBASIC3.31□□□□□ -1.88
Ift88Q61371 Gm44083-201ENSMUST00000203114 337 ntBASIC3.31□□□□□ -1.88
Ift88Q61371 Gm35931-201ENSMUST00000203931 448 ntBASIC3.31□□□□□ -1.88
Ift88Q61371 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC3.31□□□□□ -1.88
Ift88Q61371 Gm45315-201ENSMUST00000209283 333 ntBASIC3.31□□□□□ -1.88
Ift88Q61371 Gm2059-201ENSMUST00000212025 287 ntBASIC3.31□□□□□ -1.88
Ift88Q61371 AC142499.1-201ENSMUST00000220036 374 ntBASIC3.31□□□□□ -1.88
Ift88Q61371 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.31□□□□□ -1.88
Ift88Q61371 Olfr197-201ENSMUST00000080031 926 ntBASIC3.31□□□□□ -1.88
Ift88Q61371 Mir103-2-201ENSMUST00000083629 86 ntBASIC3.31□□□□□ -1.88
Ift88Q61371 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Ift88Q61371 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.31□□□□□ -1.88
Ift88Q61371 Gm24792-201ENSMUST00000104286 128 ntBASIC3.3□□□□□ -1.88
Ift88Q61371 Gm25272-201ENSMUST00000104293 128 ntBASIC3.3□□□□□ -1.88
Ift88Q61371 Gm25728-201ENSMUST00000104525 159 ntBASIC3.3□□□□□ -1.88
Ift88Q61371 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ift88Q61371 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ift88Q61371 Gm25315-201ENSMUST00000116823 121 ntBASIC3.3□□□□□ -1.88
Ift88Q61371 Gm12235-201ENSMUST00000118596 170 ntBASIC3.3□□□□□ -1.88
Ift88Q61371 Mup-ps20-201ENSMUST00000121132 389 ntBASIC3.3□□□□□ -1.88
Ift88Q61371 Gm13409-201ENSMUST00000122072 546 ntBASIC3.3□□□□□ -1.88
Ift88Q61371 Gm24997-201ENSMUST00000157910 105 ntBASIC3.3□□□□□ -1.88
Ift88Q61371 Gm20673-201ENSMUST00000177167 430 ntBASIC3.3□□□□□ -1.88
Ift88Q61371 Gm21893-201ENSMUST00000179119 397 ntBASIC3.3□□□□□ -1.88
Ift88Q61371 Gm27921-201ENSMUST00000183968 108 ntBASIC3.3□□□□□ -1.88
Ift88Q61371 Gm32033-201ENSMUST00000193483 339 ntBASIC3.3□□□□□ -1.88
Ift88Q61371 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC3.3□□□□□ -1.88
Ift88Q61371 Gm44844-201ENSMUST00000207242 336 ntBASIC3.3□□□□□ -1.88
Ift88Q61371 Gm44858-201ENSMUST00000207360 154 ntBASIC3.3□□□□□ -1.88
Ift88Q61371 Gm44654-201ENSMUST00000208052 329 ntBASIC3.3□□□□□ -1.88
Ift88Q61371 Gm7948-201ENSMUST00000212607 844 ntBASIC3.3□□□□□ -1.88
Ift88Q61371 Gm18015-201ENSMUST00000214879 316 ntBASIC3.3□□□□□ -1.88
Ift88Q61371 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.3□□□□□ -1.88
Ift88Q61371 AC154358.1-201ENSMUST00000224871 218 ntBASIC3.3□□□□□ -1.88
Ift88Q61371 Gm23517-201ENSMUST00000082830 192 ntBASIC3.3□□□□□ -1.88
Ift88Q61371 Gm23412-201ENSMUST00000083017 107 ntBASIC3.3□□□□□ -1.88
Ift88Q61371 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.3□□□□□ -1.88
Ift88Q61371 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.3□□□□□ -1.88
Ift88Q61371 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ift88Q61371 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Ift88Q61371 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Ift88Q61371 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
Ift88Q61371 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Ift88Q61371 Gm12071-201ENSMUST00000121968 469 ntBASIC3.29□□□□□ -1.88
Ift88Q61371 Gm14821-201ENSMUST00000121975 435 ntBASIC3.29□□□□□ -1.88
Ift88Q61371 Gm16218-201ENSMUST00000155424 388 ntBASIC3.29□□□□□ -1.88
Ift88Q61371 Gm26277-201ENSMUST00000157097 152 ntBASIC3.29□□□□□ -1.88
Ift88Q61371 Mir1942-201ENSMUST00000157274 63 ntBASIC3.29□□□□□ -1.88
Ift88Q61371 Gm25162-201ENSMUST00000158906 159 ntBASIC3.29□□□□□ -1.88
Ift88Q61371 Gm22263-201ENSMUST00000180060 104 ntBASIC3.29□□□□□ -1.88
Ift88Q61371 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC3.29□□□□□ -1.88
Ift88Q61371 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.29□□□□□ -1.88
Ift88Q61371 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.29□□□□□ -1.88
Ift88Q61371 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Ift88Q61371 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Ift88Q61371 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Ift88Q61371 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.29□□□□□ -1.88
Ift88Q61371 Gm650-201ENSMUST00000144428 1551 ntBASIC3.29□□□□□ -1.88
Ift88Q61371 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Ift88Q61371 Gm15088-201ENSMUST00000117973 1508 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms