Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm22073-201ENSMUST00000122668 189 ntBASIC3.24□□□□□ -1.89
CtcfQ61164 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC3.24□□□□□ -1.89
CtcfQ61164 Gm23169-201ENSMUST00000157157 112 ntBASIC3.24□□□□□ -1.89
CtcfQ61164 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CtcfQ61164 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC3.24□□□□□ -1.89
CtcfQ61164 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC3.24□□□□□ -1.89
CtcfQ61164 Gm21673-201ENSMUST00000186640 436 ntBASIC3.24□□□□□ -1.89
CtcfQ61164 Gm21135-201ENSMUST00000189023 436 ntBASIC3.24□□□□□ -1.89
CtcfQ61164 Gm28358-202ENSMUST00000189292 223 ntBASIC3.24□□□□□ -1.89
CtcfQ61164 Gm21088-201ENSMUST00000190875 316 ntBASIC3.24□□□□□ -1.89
CtcfQ61164 Gm32340-201ENSMUST00000192883 259 ntBASIC3.24□□□□□ -1.89
CtcfQ61164 Gm37007-201ENSMUST00000194234 319 ntBASIC3.24□□□□□ -1.89
CtcfQ61164 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
CtcfQ61164 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.24□□□□□ -1.89
CtcfQ61164 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.24□□□□□ -1.89
CtcfQ61164 Gm44055-201ENSMUST00000204376 247 ntBASIC3.24□□□□□ -1.89
CtcfQ61164 AC158803.1-201ENSMUST00000219495 316 ntBASIC3.24□□□□□ -1.89
CtcfQ61164 AC125311.1-201ENSMUST00000226950 220 ntBASIC3.24□□□□□ -1.89
CtcfQ61164 AC165284.1-201ENSMUST00000228614 458 ntBASIC3.24□□□□□ -1.89
CtcfQ61164 Gm25929-201ENSMUST00000082784 107 ntBASIC3.24□□□□□ -1.89
CtcfQ61164 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CtcfQ61164 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CtcfQ61164 Gm15101-201ENSMUST00000178818 1502 ntBASIC3.24□□□□□ -1.89
CtcfQ61164 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
CtcfQ61164 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CtcfQ61164 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CtcfQ61164 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
CtcfQ61164 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
CtcfQ61164 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.23□□□□□ -1.89
CtcfQ61164 Gm22496-201ENSMUST00000104493 88 ntBASIC3.23□□□□□ -1.89
CtcfQ61164 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC3.23□□□□□ -1.89
CtcfQ61164 Gm15190-201ENSMUST00000120855 276 ntBASIC3.23□□□□□ -1.89
CtcfQ61164 Gm12924-201ENSMUST00000121747 318 ntBASIC3.23□□□□□ -1.89
CtcfQ61164 Gm22560-201ENSMUST00000157332 120 ntBASIC3.23□□□□□ -1.89
CtcfQ61164 Gm24780-201ENSMUST00000157635 143 ntBASIC3.23□□□□□ -1.89
CtcfQ61164 Gm23704-201ENSMUST00000158844 340 ntBASIC3.23□□□□□ -1.89
CtcfQ61164 Gm24086-201ENSMUST00000175171 98 ntBASIC3.23□□□□□ -1.89
CtcfQ61164 Gm20651-201ENSMUST00000177219 329 ntBASIC3.23□□□□□ -1.89
CtcfQ61164 Gm25175-201ENSMUST00000178712 79 ntBASIC3.23□□□□□ -1.89
CtcfQ61164 Gm24713-201ENSMUST00000178850 107 ntBASIC3.23□□□□□ -1.89
CtcfQ61164 Gm24264-201ENSMUST00000179835 94 ntBASIC3.23□□□□□ -1.89
CtcfQ61164 Gm25448-201ENSMUST00000180065 107 ntBASIC3.23□□□□□ -1.89
CtcfQ61164 Gm26585-201ENSMUST00000180890 630 ntBASIC3.23□□□□□ -1.89
CtcfQ61164 Gm9696-202ENSMUST00000191541 830 ntBASIC3.23□□□□□ -1.89
CtcfQ61164 Gm1833-201ENSMUST00000191608 682 ntBASIC3.23□□□□□ -1.89
CtcfQ61164 Gm44655-201ENSMUST00000207768 423 ntBASIC3.23□□□□□ -1.89
CtcfQ61164 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC3.23□□□□□ -1.89
CtcfQ61164 AC129202.2-201ENSMUST00000225123 177 ntBASIC3.23□□□□□ -1.89
CtcfQ61164 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CtcfQ61164 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CtcfQ61164 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CtcfQ61164 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
CtcfQ61164 AC121844.2-201ENSMUST00000219067 2066 ntBASIC3.23□□□□□ -1.89
CtcfQ61164 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.22□□□□□ -1.89
CtcfQ61164 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
CtcfQ61164 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
CtcfQ61164 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CtcfQ61164 Gm14940-201ENSMUST00000119309 495 ntBASIC3.22□□□□□ -1.89
CtcfQ61164 Gm12723-201ENSMUST00000120700 451 ntBASIC3.22□□□□□ -1.89
CtcfQ61164 Gm11819-201ENSMUST00000122192 372 ntBASIC3.22□□□□□ -1.89
CtcfQ61164 Defb44-ps-201ENSMUST00000126871 219 ntBASIC3.22□□□□□ -1.89
CtcfQ61164 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC3.22□□□□□ -1.89
CtcfQ61164 Gm24240-201ENSMUST00000157785 135 ntBASIC3.22□□□□□ -1.89
CtcfQ61164 Gm23660-201ENSMUST00000178362 79 ntBASIC3.22□□□□□ -1.89
CtcfQ61164 Gm25360-201ENSMUST00000178786 191 ntBASIC3.22□□□□□ -1.89
CtcfQ61164 Gm24088-201ENSMUST00000179100 79 ntBASIC3.22□□□□□ -1.89
CtcfQ61164 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC3.22□□□□□ -1.89
CtcfQ61164 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CtcfQ61164 Gm37085-201ENSMUST00000193780 196 ntBASIC3.22□□□□□ -1.89
CtcfQ61164 Gm2077-201ENSMUST00000195017 319 ntBASIC3.22□□□□□ -1.89
CtcfQ61164 Gm36776-201ENSMUST00000207006 203 ntBASIC3.22□□□□□ -1.89
CtcfQ61164 Gm44959-201ENSMUST00000209127 231 ntBASIC3.22□□□□□ -1.89
CtcfQ61164 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.22□□□□□ -1.89
CtcfQ61164 Gm26129-201ENSMUST00000082719 107 ntBASIC3.22□□□□□ -1.89
CtcfQ61164 Gm23741-201ENSMUST00000097237 171 ntBASIC3.22□□□□□ -1.89
CtcfQ61164 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CtcfQ61164 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
CtcfQ61164 Gm43326-201ENSMUST00000198459 1638 ntBASIC3.22□□□□□ -1.89
CtcfQ61164 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.22□□□□□ -1.89
CtcfQ61164 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
CtcfQ61164 AC160115.1-201ENSMUST00000224678 1574 ntBASIC3.21□□□□□ -1.89
CtcfQ61164 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC3.21□□□□□ -1.9
CtcfQ61164 AC153526.2-201ENSMUST00000218206 2031 ntBASIC3.21□□□□□ -1.9
CtcfQ61164 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CtcfQ61164 Gm25466-201ENSMUST00000103995 132 ntBASIC3.21□□□□□ -1.9
CtcfQ61164 Gm7164-201ENSMUST00000117503 450 ntBASIC3.21□□□□□ -1.9
CtcfQ61164 Gm11582-201ENSMUST00000121041 236 ntBASIC3.21□□□□□ -1.9
CtcfQ61164 Gm11363-201ENSMUST00000121672 548 ntBASIC3.21□□□□□ -1.9
CtcfQ61164 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CtcfQ61164 Gm26277-201ENSMUST00000157097 152 ntBASIC3.21□□□□□ -1.9
CtcfQ61164 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3.21□□□□□ -1.9
CtcfQ61164 Mir6405-201ENSMUST00000184584 124 ntBASIC3.21□□□□□ -1.9
CtcfQ61164 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.21□□□□□ -1.9
CtcfQ61164 Gm28995-201ENSMUST00000186625 261 ntBASIC3.21□□□□□ -1.9
CtcfQ61164 Gm44308-201ENSMUST00000197080 99 ntBASIC3.21□□□□□ -1.9
CtcfQ61164 Mir3970-201ENSMUST00000199287 90 ntBASIC3.21□□□□□ -1.9
CtcfQ61164 Gm43746-201ENSMUST00000200028 317 ntBASIC3.21□□□□□ -1.9
CtcfQ61164 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC3.21□□□□□ -1.9
CtcfQ61164 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC3.21□□□□□ -1.9
CtcfQ61164 Gm45252-201ENSMUST00000211579 397 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms