Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Usf1Q61069 Gm5277-201ENSMUST00000164923 556 ntBASIC2.09□□□□□ -2.07
Usf1Q61069 Gm17538-201ENSMUST00000168236 327 ntBASIC2.09□□□□□ -2.07
Usf1Q61069 Gm8114-201ENSMUST00000172225 484 ntBASIC2.09□□□□□ -2.07
Usf1Q61069 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Usf1Q61069 Gm37455-201ENSMUST00000191993 529 ntBASIC2.09□□□□□ -2.07
Usf1Q61069 Gm38311-201ENSMUST00000192945 165 ntBASIC2.09□□□□□ -2.07
Usf1Q61069 Gm37000-201ENSMUST00000193058 428 ntBASIC2.09□□□□□ -2.07
Usf1Q61069 Gm43513-201ENSMUST00000199779 1076 ntBASIC2.09□□□□□ -2.07
Usf1Q61069 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.09□□□□□ -2.07
Usf1Q61069 Olfr1285-201ENSMUST00000208523 903 ntBASIC2.09□□□□□ -2.07
Usf1Q61069 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
Usf1Q61069 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.09□□□□□ -2.07
Usf1Q61069 AC154271.1-201ENSMUST00000224780 383 ntBASIC2.09□□□□□ -2.07
Usf1Q61069 AC132881.2-201ENSMUST00000225474 709 ntBASIC2.09□□□□□ -2.07
Usf1Q61069 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.09□□□□□ -2.07
Usf1Q61069 AC122393.3-201ENSMUST00000226343 1059 ntBASIC2.09□□□□□ -2.07
Usf1Q61069 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Usf1Q61069 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Usf1Q61069 Gm3563-201ENSMUST00000172963 1628 ntBASIC2.09□□□□□ -2.08
Usf1Q61069 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.08
Usf1Q61069 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.08□□□□□ -2.08
Usf1Q61069 Gm14558-201ENSMUST00000117458 381 ntBASIC2.08□□□□□ -2.08
Usf1Q61069 Gm12370-201ENSMUST00000117809 604 ntBASIC2.08□□□□□ -2.08
Usf1Q61069 Gm15807-201ENSMUST00000119880 1128 ntBASIC2.08□□□□□ -2.08
Usf1Q61069 Gm11407-201ENSMUST00000120362 1058 ntBASIC2.08□□□□□ -2.08
Usf1Q61069 Gm13368-201ENSMUST00000122443 430 ntBASIC2.08□□□□□ -2.08
Usf1Q61069 Gm22076-201ENSMUST00000158601 84 ntBASIC2.08□□□□□ -2.08
Usf1Q61069 Gm24878-201ENSMUST00000158782 104 ntBASIC2.08□□□□□ -2.08
Usf1Q61069 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.08□□□□□ -2.08
Usf1Q61069 Mir7667-201ENSMUST00000183866 63 ntBASIC2.08□□□□□ -2.08
Usf1Q61069 Mir7225-201ENSMUST00000184178 54 ntBASIC2.08□□□□□ -2.08
Usf1Q61069 Gm37727-201ENSMUST00000191637 819 ntBASIC2.08□□□□□ -2.08
Usf1Q61069 Gm18964-201ENSMUST00000193013 563 ntBASIC2.08□□□□□ -2.08
Usf1Q61069 Gm38238-201ENSMUST00000194334 346 ntBASIC2.08□□□□□ -2.08
Usf1Q61069 Gm43556-201ENSMUST00000196186 681 ntBASIC2.08□□□□□ -2.08
Usf1Q61069 Gm43286-201ENSMUST00000197420 424 ntBASIC2.08□□□□□ -2.08
Usf1Q61069 Gm43007-201ENSMUST00000197618 291 ntBASIC2.08□□□□□ -2.08
Usf1Q61069 Gm44408-201ENSMUST00000200205 66 ntBASIC2.08□□□□□ -2.08
Usf1Q61069 AC122225.1-201ENSMUST00000215641 369 ntBASIC2.08□□□□□ -2.08
Usf1Q61069 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Usf1Q61069 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC2.08□□□□□ -2.08
Usf1Q61069 Olfr197-201ENSMUST00000080031 926 ntBASIC2.08□□□□□ -2.08
Usf1Q61069 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Usf1Q61069 Mir423-201ENSMUST00000083584 109 ntBASIC2.08□□□□□ -2.08
Usf1Q61069 Gm26166-201ENSMUST00000083788 107 ntBASIC2.08□□□□□ -2.08
Usf1Q61069 Gm23042-201ENSMUST00000083866 101 ntBASIC2.08□□□□□ -2.08
Usf1Q61069 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Usf1Q61069 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC2.07□□□□□ -2.08
Usf1Q61069 Gm14852-201ENSMUST00000120065 647 ntBASIC2.07□□□□□ -2.08
Usf1Q61069 Gm5396-201ENSMUST00000121222 532 ntBASIC2.07□□□□□ -2.08
Usf1Q61069 Gm23223-201ENSMUST00000158119 127 ntBASIC2.07□□□□□ -2.08
Usf1Q61069 Gm22947-201ENSMUST00000158559 91 ntBASIC2.07□□□□□ -2.08
Usf1Q61069 Gm23289-201ENSMUST00000175615 108 ntBASIC2.07□□□□□ -2.08
Usf1Q61069 Gm18416-201ENSMUST00000175635 1003 ntBASIC2.07□□□□□ -2.08
Usf1Q61069 Gm27761-201ENSMUST00000184091 131 ntBASIC2.07□□□□□ -2.08
Usf1Q61069 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC2.07□□□□□ -2.08
Usf1Q61069 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.07□□□□□ -2.08
Usf1Q61069 Gm5329-201ENSMUST00000186898 463 ntBASIC2.07□□□□□ -2.08
Usf1Q61069 Gm10193-201ENSMUST00000188288 231 ntBASIC2.07□□□□□ -2.08
Usf1Q61069 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Usf1Q61069 Gm37579-201ENSMUST00000194291 142 ntBASIC2.07□□□□□ -2.08
Usf1Q61069 Gm38167-201ENSMUST00000195704 1178 ntBASIC2.07□□□□□ -2.08
Usf1Q61069 Gm23370-202ENSMUST00000197008 129 ntBASIC2.07□□□□□ -2.08
Usf1Q61069 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC2.07□□□□□ -2.08
Usf1Q61069 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC2.07□□□□□ -2.08
Usf1Q61069 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.07□□□□□ -2.08
Usf1Q61069 Gm7214-201ENSMUST00000222428 272 ntBASIC2.07□□□□□ -2.08
Usf1Q61069 AC160962.2-201ENSMUST00000224761 632 ntBASIC2.07□□□□□ -2.08
Usf1Q61069 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.07□□□□□ -2.08
Usf1Q61069 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Usf1Q61069 Gm5471-201ENSMUST00000072732 337 ntBASIC2.07□□□□□ -2.08
Usf1Q61069 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Usf1Q61069 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Usf1Q61069 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Usf1Q61069 Gm19428-201ENSMUST00000220512 1995 ntBASIC2.07□□□□□ -2.08
Usf1Q61069 Gm381-201ENSMUST00000117443 2037 ntBASIC2.07□□□□□ -2.08
Usf1Q61069 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.07□□□□□ -2.08
Usf1Q61069 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Usf1Q61069 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.06□□□□□ -2.08
Usf1Q61069 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.06□□□□□ -2.08
Usf1Q61069 Gm25938-201ENSMUST00000104139 166 ntBASIC2.06□□□□□ -2.08
Usf1Q61069 Gm12765-201ENSMUST00000117273 615 ntBASIC2.06□□□□□ -2.08
Usf1Q61069 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
Usf1Q61069 Gm26105-201ENSMUST00000157253 190 ntBASIC2.06□□□□□ -2.08
Usf1Q61069 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
Usf1Q61069 Gm6660-201ENSMUST00000179149 468 ntBASIC2.06□□□□□ -2.08
Usf1Q61069 Gm43669-201ENSMUST00000198229 436 ntBASIC2.06□□□□□ -2.08
Usf1Q61069 Gm43083-201ENSMUST00000199594 476 ntBASIC2.06□□□□□ -2.08
Usf1Q61069 Gm43550-201ENSMUST00000200597 303 ntBASIC2.06□□□□□ -2.08
Usf1Q61069 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC2.06□□□□□ -2.08
Usf1Q61069 Gm19032-201ENSMUST00000208584 592 ntBASIC2.06□□□□□ -2.08
Usf1Q61069 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Usf1Q61069 Gm8031-201ENSMUST00000213430 626 ntBASIC2.06□□□□□ -2.08
Usf1Q61069 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC2.06□□□□□ -2.08
Usf1Q61069 Olfr575-201ENSMUST00000084812 957 ntBASIC2.06□□□□□ -2.08
Usf1Q61069 Mir452-201ENSMUST00000093629 85 ntBASIC2.06□□□□□ -2.08
Usf1Q61069 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC2.06□□□□□ -2.08
Usf1Q61069 Gm15084-201ENSMUST00000178585 1502 ntBASIC2.06□□□□□ -2.08
Usf1Q61069 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.06□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 128.5 ms