Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Mir6352-201ENSMUST00000184495 116 ntBASIC0.65□□□□□ -2.31
Trav3-1Q5R1I8 Gm18357-201ENSMUST00000188184 580 ntBASIC0.65□□□□□ -2.31
Trav3-1Q5R1I8 AC159476.2-201ENSMUST00000216221 418 ntBASIC0.65□□□□□ -2.31
Trav3-1Q5R1I8 AC153870.1-201ENSMUST00000219599 560 ntBASIC0.65□□□□□ -2.31
Trav3-1Q5R1I8 AC154521.1-201ENSMUST00000222635 330 ntBASIC0.65□□□□□ -2.31
Trav3-1Q5R1I8 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC0.65□□□□□ -2.31
Trav3-1Q5R1I8 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
Trav3-1Q5R1I8 AC115735.3-201ENSMUST00000227757 513 ntBASIC0.65□□□□□ -2.31
Trav3-1Q5R1I8 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
Trav3-1Q5R1I8 Mir221-201ENSMUST00000083488 95 ntBASIC0.65□□□□□ -2.31
Trav3-1Q5R1I8 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
Trav3-1Q5R1I8 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
Trav3-1Q5R1I8 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
Trav3-1Q5R1I8 Gm13378-201ENSMUST00000117483 336 ntBASIC0.64□□□□□ -2.31
Trav3-1Q5R1I8 Gm14215-201ENSMUST00000120578 221 ntBASIC0.64□□□□□ -2.31
Trav3-1Q5R1I8 Gm23548-201ENSMUST00000158963 106 ntBASIC0.64□□□□□ -2.31
Trav3-1Q5R1I8 Gm21744-201ENSMUST00000178403 662 ntBASIC0.64□□□□□ -2.31
Trav3-1Q5R1I8 Gm27028-201ENSMUST00000182303 399 ntBASIC0.64□□□□□ -2.31
Trav3-1Q5R1I8 Gm29413-201ENSMUST00000186019 880 ntBASIC0.64□□□□□ -2.31
Trav3-1Q5R1I8 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
Trav3-1Q5R1I8 Gm28700-201ENSMUST00000187614 579 ntBASIC0.64□□□□□ -2.31
Trav3-1Q5R1I8 Gm29639-201ENSMUST00000188375 580 ntBASIC0.64□□□□□ -2.31
Trav3-1Q5R1I8 Gm28843-201ENSMUST00000189198 678 ntBASIC0.64□□□□□ -2.31
Trav3-1Q5R1I8 Gm29546-201ENSMUST00000191171 678 ntBASIC0.64□□□□□ -2.31
Trav3-1Q5R1I8 Gm38113-201ENSMUST00000193704 201 ntBASIC0.64□□□□□ -2.31
Trav3-1Q5R1I8 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC0.64□□□□□ -2.31
Trav3-1Q5R1I8 Gm9377-201ENSMUST00000207227 623 ntBASIC0.64□□□□□ -2.31
Trav3-1Q5R1I8 Gm19885-201ENSMUST00000212853 343 ntBASIC0.64□□□□□ -2.31
Trav3-1Q5R1I8 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC0.64□□□□□ -2.31
Trav3-1Q5R1I8 Gm18774-201ENSMUST00000218269 601 ntBASIC0.64□□□□□ -2.31
Trav3-1Q5R1I8 Gm10092-201ENSMUST00000077110 180 ntBASIC0.64□□□□□ -2.31
Trav3-1Q5R1I8 Gm26175-201ENSMUST00000083794 131 ntBASIC0.64□□□□□ -2.31
Trav3-1Q5R1I8 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC0.64□□□□□ -2.31
Trav3-1Q5R1I8 Gm37143-201ENSMUST00000195180 3259 ntBASIC0.64□□□□□ -2.31
Trav3-1Q5R1I8 Gm44821-201ENSMUST00000208212 2002 ntBASIC0.64□□□□□ -2.31
Trav3-1Q5R1I8 Gm22761-201ENSMUST00000102278 96 ntBASIC0.63□□□□□ -2.31
Trav3-1Q5R1I8 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
Trav3-1Q5R1I8 Gm6444-201ENSMUST00000119611 458 ntBASIC0.63□□□□□ -2.31
Trav3-1Q5R1I8 Gm11785-201ENSMUST00000120165 601 ntBASIC0.63□□□□□ -2.31
Trav3-1Q5R1I8 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC0.63□□□□□ -2.31
Trav3-1Q5R1I8 Gm22075-201ENSMUST00000158599 192 ntBASIC0.63□□□□□ -2.31
Trav3-1Q5R1I8 Gm24885-201ENSMUST00000158783 270 ntBASIC0.63□□□□□ -2.31
Trav3-1Q5R1I8 Gm22500-201ENSMUST00000158982 99 ntBASIC0.63□□□□□ -2.31
Trav3-1Q5R1I8 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
Trav3-1Q5R1I8 Gm21754-201ENSMUST00000177550 479 ntBASIC0.63□□□□□ -2.31
Trav3-1Q5R1I8 Gm25020-201ENSMUST00000178071 107 ntBASIC0.63□□□□□ -2.31
Trav3-1Q5R1I8 Mir6971-201ENSMUST00000183497 63 ntBASIC0.63□□□□□ -2.31
Trav3-1Q5R1I8 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC0.63□□□□□ -2.31
Trav3-1Q5R1I8 Gm27660-201ENSMUST00000184028 208 ntBASIC0.63□□□□□ -2.31
Trav3-1Q5R1I8 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
Trav3-1Q5R1I8 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC0.63□□□□□ -2.31
Trav3-1Q5R1I8 Gm37002-201ENSMUST00000194560 373 ntBASIC0.63□□□□□ -2.31
Trav3-1Q5R1I8 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC0.63□□□□□ -2.31
Trav3-1Q5R1I8 Gm43652-201ENSMUST00000196219 675 ntBASIC0.63□□□□□ -2.31
Trav3-1Q5R1I8 Gm43531-201ENSMUST00000200676 1114 ntBASIC0.63□□□□□ -2.31
Trav3-1Q5R1I8 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC0.63□□□□□ -2.31
Trav3-1Q5R1I8 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
Trav3-1Q5R1I8 Snord35a-201ENSMUST00000083884 90 ntBASIC0.63□□□□□ -2.31
Trav3-1Q5R1I8 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC0.62□□□□□ -2.31
Trav3-1Q5R1I8 Gm14879-201ENSMUST00000117308 507 ntBASIC0.62□□□□□ -2.31
Trav3-1Q5R1I8 Gm9001-201ENSMUST00000121642 399 ntBASIC0.62□□□□□ -2.31
Trav3-1Q5R1I8 Gm15214-201ENSMUST00000122155 470 ntBASIC0.62□□□□□ -2.31
Trav3-1Q5R1I8 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC0.62□□□□□ -2.31
Trav3-1Q5R1I8 Gm23122-201ENSMUST00000157645 103 ntBASIC0.62□□□□□ -2.31
Trav3-1Q5R1I8 Gm22731-201ENSMUST00000158086 94 ntBASIC0.62□□□□□ -2.31
Trav3-1Q5R1I8 Gm22611-201ENSMUST00000158288 150 ntBASIC0.62□□□□□ -2.31
Trav3-1Q5R1I8 Gm22164-201ENSMUST00000158413 106 ntBASIC0.62□□□□□ -2.31
Trav3-1Q5R1I8 Gm3025-201ENSMUST00000163454 489 ntBASIC0.62□□□□□ -2.31
Trav3-1Q5R1I8 Atp2b4-208ENSMUST00000167348 243 ntBASIC0.62□□□□□ -2.31
Trav3-1Q5R1I8 Gm3111-201ENSMUST00000167426 490 ntBASIC0.62□□□□□ -2.31
Trav3-1Q5R1I8 Gm20386-201ENSMUST00000174010 132 ntBASIC0.62□□□□□ -2.31
Trav3-1Q5R1I8 Mir3473a-201ENSMUST00000175011 78 ntBASIC0.62□□□□□ -2.31
Trav3-1Q5R1I8 Gm21758-201ENSMUST00000179336 819 ntBASIC0.62□□□□□ -2.31
Trav3-1Q5R1I8 Mir6381-201ENSMUST00000183426 87 ntBASIC0.62□□□□□ -2.31
Trav3-1Q5R1I8 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
Trav3-1Q5R1I8 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
Trav3-1Q5R1I8 Gm29647-201ENSMUST00000188795 666 ntBASIC0.62□□□□□ -2.31
Trav3-1Q5R1I8 Gm20832-201ENSMUST00000189076 665 ntBASIC0.62□□□□□ -2.31
Trav3-1Q5R1I8 Gm28241-201ENSMUST00000190916 235 ntBASIC0.62□□□□□ -2.31
Trav3-1Q5R1I8 Gm28504-201ENSMUST00000190977 666 ntBASIC0.62□□□□□ -2.31
Trav3-1Q5R1I8 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC0.62□□□□□ -2.31
Trav3-1Q5R1I8 Gm37054-201ENSMUST00000193481 543 ntBASIC0.62□□□□□ -2.31
Trav3-1Q5R1I8 Gm35843-201ENSMUST00000193716 666 ntBASIC0.62□□□□□ -2.31
Trav3-1Q5R1I8 Gm37743-201ENSMUST00000194645 376 ntBASIC0.62□□□□□ -2.31
Trav3-1Q5R1I8 Gm36728-201ENSMUST00000195782 665 ntBASIC0.62□□□□□ -2.31
Trav3-1Q5R1I8 Mir3961-201ENSMUST00000198795 59 ntBASIC0.62□□□□□ -2.31
Trav3-1Q5R1I8 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC0.62□□□□□ -2.31
Trav3-1Q5R1I8 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC0.62□□□□□ -2.31
Trav3-1Q5R1I8 Gm21089-201ENSMUST00000215843 325 ntBASIC0.62□□□□□ -2.31
Trav3-1Q5R1I8 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
Trav3-1Q5R1I8 AC126672.1-201ENSMUST00000217096 396 ntBASIC0.62□□□□□ -2.31
Trav3-1Q5R1I8 CT025579.1-201ENSMUST00000223779 366 ntBASIC0.62□□□□□ -2.31
Trav3-1Q5R1I8 AC102352.1-201ENSMUST00000224187 582 ntBASIC0.62□□□□□ -2.31
Trav3-1Q5R1I8 AC160930.1-201ENSMUST00000227194 337 ntBASIC0.62□□□□□ -2.31
Trav3-1Q5R1I8 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
Trav3-1Q5R1I8 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
Trav3-1Q5R1I8 AC134917.1-201ENSMUST00000220517 1449 ntBASIC0.62□□□□□ -2.31
Trav3-1Q5R1I8 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
Trav3-1Q5R1I8 Gm18795-202ENSMUST00000223373 2920 ntBASIC0.61□□□□□ -2.31
Trav3-1Q5R1I8 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms