Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Gm22936-201ENSMUST00000103955 126 ntBASIC2.18□□□□□ -2.06
Usp28Q5I043 Gm25168-201ENSMUST00000104189 132 ntBASIC2.18□□□□□ -2.06
Usp28Q5I043 Gm22494-201ENSMUST00000104495 128 ntBASIC2.18□□□□□ -2.06
Usp28Q5I043 Gm13806-201ENSMUST00000117822 325 ntBASIC2.18□□□□□ -2.06
Usp28Q5I043 Gm8858-201ENSMUST00000118259 342 ntBASIC2.18□□□□□ -2.06
Usp28Q5I043 Gm12793-201ENSMUST00000119268 292 ntBASIC2.18□□□□□ -2.06
Usp28Q5I043 Gm14766-201ENSMUST00000121689 367 ntBASIC2.18□□□□□ -2.06
Usp28Q5I043 Gm12770-201ENSMUST00000121734 462 ntBASIC2.18□□□□□ -2.06
Usp28Q5I043 Gm23391-201ENSMUST00000157579 104 ntBASIC2.18□□□□□ -2.06
Usp28Q5I043 Gm23559-201ENSMUST00000157824 103 ntBASIC2.18□□□□□ -2.06
Usp28Q5I043 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC2.18□□□□□ -2.06
Usp28Q5I043 Gm22851-201ENSMUST00000178741 94 ntBASIC2.18□□□□□ -2.06
Usp28Q5I043 Gm25074-201ENSMUST00000178782 94 ntBASIC2.18□□□□□ -2.06
Usp28Q5I043 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC2.18□□□□□ -2.06
Usp28Q5I043 Gm27919-201ENSMUST00000185163 107 ntBASIC2.18□□□□□ -2.06
Usp28Q5I043 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC2.18□□□□□ -2.06
Usp28Q5I043 Gm28404-201ENSMUST00000190242 453 ntBASIC2.18□□□□□ -2.06
Usp28Q5I043 Trbv24-201ENSMUST00000194614 347 ntBASIC2.18□□□□□ -2.06
Usp28Q5I043 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC2.18□□□□□ -2.06
Usp28Q5I043 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC2.18□□□□□ -2.06
Usp28Q5I043 Gm18113-201ENSMUST00000220630 303 ntBASIC2.18□□□□□ -2.06
Usp28Q5I043 AC116589.7-201ENSMUST00000221061 239 ntBASIC2.18□□□□□ -2.06
Usp28Q5I043 AC164117.1-201ENSMUST00000221726 239 ntBASIC2.18□□□□□ -2.06
Usp28Q5I043 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.18□□□□□ -2.06
Usp28Q5I043 AC156790.3-201ENSMUST00000226200 254 ntBASIC2.18□□□□□ -2.06
Usp28Q5I043 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Usp28Q5I043 Gm26446-201ENSMUST00000082455 103 ntBASIC2.18□□□□□ -2.06
Usp28Q5I043 Gm22247-201ENSMUST00000082476 131 ntBASIC2.18□□□□□ -2.06
Usp28Q5I043 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Usp28Q5I043 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Usp28Q5I043 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Usp28Q5I043 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.17□□□□□ -2.06
Usp28Q5I043 Mir1195-201ENSMUST00000116818 98 ntBASIC2.17□□□□□ -2.06
Usp28Q5I043 Gm16428-201ENSMUST00000121193 723 ntBASIC2.17□□□□□ -2.06
Usp28Q5I043 Gm14362-201ENSMUST00000121679 273 ntBASIC2.17□□□□□ -2.06
Usp28Q5I043 Gm15077-201ENSMUST00000122344 362 ntBASIC2.17□□□□□ -2.06
Usp28Q5I043 Gm15254-201ENSMUST00000149567 273 ntBASIC2.17□□□□□ -2.06
Usp28Q5I043 Gm25559-201ENSMUST00000157182 74 ntBASIC2.17□□□□□ -2.06
Usp28Q5I043 Gm24438-201ENSMUST00000157893 115 ntBASIC2.17□□□□□ -2.06
Usp28Q5I043 Gm22891-201ENSMUST00000158641 164 ntBASIC2.17□□□□□ -2.06
Usp28Q5I043 Mir6335-201ENSMUST00000184081 98 ntBASIC2.17□□□□□ -2.06
Usp28Q5I043 Gm28356-202ENSMUST00000187566 858 ntBASIC2.17□□□□□ -2.06
Usp28Q5I043 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC2.17□□□□□ -2.06
Usp28Q5I043 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC2.17□□□□□ -2.06
Usp28Q5I043 Gm6059-201ENSMUST00000196903 340 ntBASIC2.17□□□□□ -2.06
Usp28Q5I043 Mir7217-201ENSMUST00000200304 62 ntBASIC2.17□□□□□ -2.06
Usp28Q5I043 AC158803.1-201ENSMUST00000219495 316 ntBASIC2.17□□□□□ -2.06
Usp28Q5I043 AC167192.1-201ENSMUST00000225908 139 ntBASIC2.17□□□□□ -2.06
Usp28Q5I043 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Usp28Q5I043 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
Usp28Q5I043 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Usp28Q5I043 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Usp28Q5I043 Mir30d-201ENSMUST00000083503 82 ntBASIC2.17□□□□□ -2.06
Usp28Q5I043 Gm26108-201ENSMUST00000083973 191 ntBASIC2.17□□□□□ -2.06
Usp28Q5I043 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Usp28Q5I043 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Usp28Q5I043 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.16□□□□□ -2.06
Usp28Q5I043 Gm22831-201ENSMUST00000102473 109 ntBASIC2.16□□□□□ -2.06
Usp28Q5I043 Gm25376-201ENSMUST00000104340 133 ntBASIC2.16□□□□□ -2.06
Usp28Q5I043 Gm12053-201ENSMUST00000119022 252 ntBASIC2.16□□□□□ -2.06
Usp28Q5I043 Gm16411-201ENSMUST00000122164 1100 ntBASIC2.16□□□□□ -2.06
Usp28Q5I043 n-R5s80-201ENSMUST00000122596 111 ntBASIC2.16□□□□□ -2.06
Usp28Q5I043 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Usp28Q5I043 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Usp28Q5I043 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
Usp28Q5I043 Gm23588-201ENSMUST00000157659 99 ntBASIC2.16□□□□□ -2.06
Usp28Q5I043 Gm26186-201ENSMUST00000157689 125 ntBASIC2.16□□□□□ -2.06
Usp28Q5I043 Gm22631-201ENSMUST00000179656 94 ntBASIC2.16□□□□□ -2.06
Usp28Q5I043 Gm28437-201ENSMUST00000190277 783 ntBASIC2.16□□□□□ -2.06
Usp28Q5I043 Gm7871-201ENSMUST00000195346 618 ntBASIC2.16□□□□□ -2.06
Usp28Q5I043 Gm44011-201ENSMUST00000203336 394 ntBASIC2.16□□□□□ -2.06
Usp28Q5I043 AL772265.1-201ENSMUST00000214379 305 ntBASIC2.16□□□□□ -2.06
Usp28Q5I043 CT025606.1-201ENSMUST00000218273 324 ntBASIC2.16□□□□□ -2.06
Usp28Q5I043 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Usp28Q5I043 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.16□□□□□ -2.06
Usp28Q5I043 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
Usp28Q5I043 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.15□□□□□ -2.06
Usp28Q5I043 Gm14558-201ENSMUST00000117458 381 ntBASIC2.15□□□□□ -2.07
Usp28Q5I043 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.15□□□□□ -2.07
Usp28Q5I043 Gm12941-201ENSMUST00000117934 220 ntBASIC2.15□□□□□ -2.07
Usp28Q5I043 Gm12806-201ENSMUST00000119384 268 ntBASIC2.15□□□□□ -2.07
Usp28Q5I043 Gm12006-201ENSMUST00000120786 403 ntBASIC2.15□□□□□ -2.07
Usp28Q5I043 Gm6568-201ENSMUST00000122274 697 ntBASIC2.15□□□□□ -2.07
Usp28Q5I043 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.07
Usp28Q5I043 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC2.15□□□□□ -2.07
Usp28Q5I043 Gm2830-201ENSMUST00000140330 385 ntBASIC2.15□□□□□ -2.07
Usp28Q5I043 Gm9071-201ENSMUST00000165915 474 ntBASIC2.15□□□□□ -2.07
Usp28Q5I043 Gm23813-201ENSMUST00000175153 77 ntBASIC2.15□□□□□ -2.07
Usp28Q5I043 Mir6950-201ENSMUST00000184438 73 ntBASIC2.15□□□□□ -2.07
Usp28Q5I043 Gm37771-201ENSMUST00000193121 265 ntBASIC2.15□□□□□ -2.07
Usp28Q5I043 Gm45252-201ENSMUST00000211579 397 ntBASIC2.15□□□□□ -2.07
Usp28Q5I043 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC2.15□□□□□ -2.07
Usp28Q5I043 AC120394.1-201ENSMUST00000217153 351 ntBASIC2.15□□□□□ -2.07
Usp28Q5I043 Gm19326-201ENSMUST00000219818 326 ntBASIC2.15□□□□□ -2.07
Usp28Q5I043 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Usp28Q5I043 CT009713.6-201ENSMUST00000223615 294 ntBASIC2.15□□□□□ -2.07
Usp28Q5I043 Gm26228-201ENSMUST00000082512 107 ntBASIC2.15□□□□□ -2.07
Usp28Q5I043 Gm25080-201ENSMUST00000082526 107 ntBASIC2.15□□□□□ -2.07
Usp28Q5I043 Gm25518-201ENSMUST00000083864 107 ntBASIC2.15□□□□□ -2.07
Usp28Q5I043 Gm25257-201ENSMUST00000083907 110 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 109.2 ms