Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm8023-201ENSMUST00000195298 903 ntBASIC2.39□□□□□ -2.03
Trim40Q3UWA4 Gm43722-201ENSMUST00000196054 124 ntBASIC2.39□□□□□ -2.03
Trim40Q3UWA4 Gm42925-201ENSMUST00000197359 285 ntBASIC2.39□□□□□ -2.03
Trim40Q3UWA4 Mir691-201ENSMUST00000199719 78 ntBASIC2.39□□□□□ -2.03
Trim40Q3UWA4 Gm43284-201ENSMUST00000200103 253 ntBASIC2.39□□□□□ -2.03
Trim40Q3UWA4 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC2.39□□□□□ -2.03
Trim40Q3UWA4 AC159619.2-201ENSMUST00000222924 401 ntBASIC2.39□□□□□ -2.03
Trim40Q3UWA4 AC166830.1-201ENSMUST00000224201 533 ntBASIC2.39□□□□□ -2.03
Trim40Q3UWA4 AC144628.2-201ENSMUST00000227374 352 ntBASIC2.39□□□□□ -2.03
Trim40Q3UWA4 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Trim40Q3UWA4 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC2.39□□□□□ -2.03
Trim40Q3UWA4 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Trim40Q3UWA4 Gm22779-201ENSMUST00000104085 107 ntBASIC2.38□□□□□ -2.03
Trim40Q3UWA4 Mir743b-201ENSMUST00000104751 77 ntBASIC2.38□□□□□ -2.03
Trim40Q3UWA4 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Trim40Q3UWA4 Gm25509-201ENSMUST00000116985 106 ntBASIC2.38□□□□□ -2.03
Trim40Q3UWA4 Gm13331-201ENSMUST00000117500 448 ntBASIC2.38□□□□□ -2.03
Trim40Q3UWA4 Gm14906-201ENSMUST00000119265 390 ntBASIC2.38□□□□□ -2.03
Trim40Q3UWA4 Gm13913-201ENSMUST00000121126 260 ntBASIC2.38□□□□□ -2.03
Trim40Q3UWA4 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC2.38□□□□□ -2.03
Trim40Q3UWA4 Gm23000-201ENSMUST00000157083 139 ntBASIC2.38□□□□□ -2.03
Trim40Q3UWA4 Gm26278-201ENSMUST00000157098 132 ntBASIC2.38□□□□□ -2.03
Trim40Q3UWA4 Gm17062-201ENSMUST00000166987 461 ntBASIC2.38□□□□□ -2.03
Trim40Q3UWA4 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Trim40Q3UWA4 Gm23268-201ENSMUST00000175494 78 ntBASIC2.38□□□□□ -2.03
Trim40Q3UWA4 Gm29231-201ENSMUST00000179850 319 ntBASIC2.38□□□□□ -2.03
Trim40Q3UWA4 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Trim40Q3UWA4 Gm36953-201ENSMUST00000195295 268 ntBASIC2.38□□□□□ -2.03
Trim40Q3UWA4 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC2.38□□□□□ -2.03
Trim40Q3UWA4 Gm43550-201ENSMUST00000200597 303 ntBASIC2.38□□□□□ -2.03
Trim40Q3UWA4 Gm45427-201ENSMUST00000209572 1253 ntBASIC2.38□□□□□ -2.03
Trim40Q3UWA4 Gm45678-201ENSMUST00000210509 295 ntBASIC2.38□□□□□ -2.03
Trim40Q3UWA4 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC2.38□□□□□ -2.03
Trim40Q3UWA4 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Trim40Q3UWA4 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Trim40Q3UWA4 n-R5s166-201ENSMUST00000082898 121 ntBASIC2.38□□□□□ -2.03
Trim40Q3UWA4 Gm23727-201ENSMUST00000083352 164 ntBASIC2.38□□□□□ -2.03
Trim40Q3UWA4 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.37□□□□□ -2.03
Trim40Q3UWA4 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Trim40Q3UWA4 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.37□□□□□ -2.03
Trim40Q3UWA4 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.37□□□□□ -2.03
Trim40Q3UWA4 Gm12255-201ENSMUST00000117184 284 ntBASIC2.37□□□□□ -2.03
Trim40Q3UWA4 Gm14073-201ENSMUST00000117344 381 ntBASIC2.37□□□□□ -2.03
Trim40Q3UWA4 Gm13876-201ENSMUST00000118451 261 ntBASIC2.37□□□□□ -2.03
Trim40Q3UWA4 Gm13475-201ENSMUST00000119290 234 ntBASIC2.37□□□□□ -2.03
Trim40Q3UWA4 Gm15466-201ENSMUST00000122299 333 ntBASIC2.37□□□□□ -2.03
Trim40Q3UWA4 Gm22322-201ENSMUST00000157151 111 ntBASIC2.37□□□□□ -2.03
Trim40Q3UWA4 Gm23137-201ENSMUST00000157559 107 ntBASIC2.37□□□□□ -2.03
Trim40Q3UWA4 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC2.37□□□□□ -2.03
Trim40Q3UWA4 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC2.37□□□□□ -2.03
Trim40Q3UWA4 Gm24862-201ENSMUST00000179103 79 ntBASIC2.37□□□□□ -2.03
Trim40Q3UWA4 Gm23310-201ENSMUST00000179105 79 ntBASIC2.37□□□□□ -2.03
Trim40Q3UWA4 Gm25461-201ENSMUST00000179293 79 ntBASIC2.37□□□□□ -2.03
Trim40Q3UWA4 Gm21638-201ENSMUST00000179473 836 ntBASIC2.37□□□□□ -2.03
Trim40Q3UWA4 Gm9892-201ENSMUST00000182415 992 ntBASIC2.37□□□□□ -2.03
Trim40Q3UWA4 Gm7654-201ENSMUST00000186738 683 ntBASIC2.37□□□□□ -2.03
Trim40Q3UWA4 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Trim40Q3UWA4 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Trim40Q3UWA4 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.37□□□□□ -2.03
Trim40Q3UWA4 Gm38238-201ENSMUST00000194334 346 ntBASIC2.37□□□□□ -2.03
Trim40Q3UWA4 Gm33354-201ENSMUST00000195448 906 ntBASIC2.37□□□□□ -2.03
Trim40Q3UWA4 Gm43193-201ENSMUST00000197732 441 ntBASIC2.37□□□□□ -2.03
Trim40Q3UWA4 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Trim40Q3UWA4 Gm5034-201ENSMUST00000199115 634 ntBASIC2.37□□□□□ -2.03
Trim40Q3UWA4 Gm43529-201ENSMUST00000199178 412 ntBASIC2.37□□□□□ -2.03
Trim40Q3UWA4 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC2.37□□□□□ -2.03
Trim40Q3UWA4 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC2.37□□□□□ -2.03
Trim40Q3UWA4 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC2.37□□□□□ -2.03
Trim40Q3UWA4 Gm7495-201ENSMUST00000215099 426 ntBASIC2.37□□□□□ -2.03
Trim40Q3UWA4 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC2.37□□□□□ -2.03
Trim40Q3UWA4 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.37□□□□□ -2.03
Trim40Q3UWA4 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.37□□□□□ -2.03
Trim40Q3UWA4 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.37□□□□□ -2.03
Trim40Q3UWA4 AC160962.2-201ENSMUST00000224761 632 ntBASIC2.37□□□□□ -2.03
Trim40Q3UWA4 Gm24037-201ENSMUST00000082871 180 ntBASIC2.37□□□□□ -2.03
Trim40Q3UWA4 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.37□□□□□ -2.03
Trim40Q3UWA4 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.37□□□□□ -2.03
Trim40Q3UWA4 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trim40Q3UWA4 Gm650-201ENSMUST00000144428 1551 ntBASIC2.36□□□□□ -2.03
Trim40Q3UWA4 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trim40Q3UWA4 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.36□□□□□ -2.03
Trim40Q3UWA4 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trim40Q3UWA4 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC2.36□□□□□ -2.03
Trim40Q3UWA4 Gm22115-201ENSMUST00000103976 133 ntBASIC2.36□□□□□ -2.03
Trim40Q3UWA4 Gm23923-201ENSMUST00000104108 133 ntBASIC2.36□□□□□ -2.03
Trim40Q3UWA4 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
Trim40Q3UWA4 Gm14197-201ENSMUST00000117480 1049 ntBASIC2.36□□□□□ -2.03
Trim40Q3UWA4 Gm12871-201ENSMUST00000118758 438 ntBASIC2.36□□□□□ -2.03
Trim40Q3UWA4 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC2.36□□□□□ -2.03
Trim40Q3UWA4 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC2.36□□□□□ -2.03
Trim40Q3UWA4 Gm24419-201ENSMUST00000157875 332 ntBASIC2.36□□□□□ -2.03
Trim40Q3UWA4 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC2.36□□□□□ -2.03
Trim40Q3UWA4 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC2.36□□□□□ -2.03
Trim40Q3UWA4 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trim40Q3UWA4 Gm37807-201ENSMUST00000194310 190 ntBASIC2.36□□□□□ -2.03
Trim40Q3UWA4 Gm43431-201ENSMUST00000198577 340 ntBASIC2.36□□□□□ -2.03
Trim40Q3UWA4 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC2.36□□□□□ -2.03
Trim40Q3UWA4 Gm18000-201ENSMUST00000212153 800 ntBASIC2.36□□□□□ -2.03
Trim40Q3UWA4 AC171206.2-201ENSMUST00000215252 389 ntBASIC2.36□□□□□ -2.03
Trim40Q3UWA4 CT009718.4-201ENSMUST00000221881 109 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 144.2 ms