Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC2.18□□□□□ -2.06
Upf3aQ3ULJ3 AC122393.3-201ENSMUST00000226343 1059 ntBASIC2.18□□□□□ -2.06
Upf3aQ3ULJ3 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Upf3aQ3ULJ3 n-R5s37-201ENSMUST00000082533 118 ntBASIC2.18□□□□□ -2.06
Upf3aQ3ULJ3 Gm22061-201ENSMUST00000082557 107 ntBASIC2.18□□□□□ -2.06
Upf3aQ3ULJ3 Gm24292-201ENSMUST00000082888 107 ntBASIC2.18□□□□□ -2.06
Upf3aQ3ULJ3 Gm24044-201ENSMUST00000083107 156 ntBASIC2.18□□□□□ -2.06
Upf3aQ3ULJ3 Gm25411-201ENSMUST00000083760 151 ntBASIC2.18□□□□□ -2.06
Upf3aQ3ULJ3 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Upf3aQ3ULJ3 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
Upf3aQ3ULJ3 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.17□□□□□ -2.06
Upf3aQ3ULJ3 Mir465c-2-201ENSMUST00000104757 81 ntBASIC2.17□□□□□ -2.06
Upf3aQ3ULJ3 Gm6954-201ENSMUST00000117416 225 ntBASIC2.17□□□□□ -2.06
Upf3aQ3ULJ3 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC2.17□□□□□ -2.06
Upf3aQ3ULJ3 Gm22597-201ENSMUST00000157602 80 ntBASIC2.17□□□□□ -2.06
Upf3aQ3ULJ3 Gm25460-201ENSMUST00000157954 127 ntBASIC2.17□□□□□ -2.06
Upf3aQ3ULJ3 Gm20794-201ENSMUST00000177626 628 ntBASIC2.17□□□□□ -2.06
Upf3aQ3ULJ3 Gm24713-201ENSMUST00000178850 107 ntBASIC2.17□□□□□ -2.06
Upf3aQ3ULJ3 Gm25448-201ENSMUST00000180065 107 ntBASIC2.17□□□□□ -2.06
Upf3aQ3ULJ3 Gm24306-201ENSMUST00000180229 79 ntBASIC2.17□□□□□ -2.06
Upf3aQ3ULJ3 Gm28356-202ENSMUST00000187566 858 ntBASIC2.17□□□□□ -2.06
Upf3aQ3ULJ3 Gm20885-201ENSMUST00000190192 654 ntBASIC2.17□□□□□ -2.06
Upf3aQ3ULJ3 Gm36866-201ENSMUST00000193343 657 ntBASIC2.17□□□□□ -2.06
Upf3aQ3ULJ3 Gm36047-201ENSMUST00000193659 657 ntBASIC2.17□□□□□ -2.06
Upf3aQ3ULJ3 Gm20857-201ENSMUST00000194766 657 ntBASIC2.17□□□□□ -2.06
Upf3aQ3ULJ3 Gm20858-201ENSMUST00000195459 657 ntBASIC2.17□□□□□ -2.06
Upf3aQ3ULJ3 Gm43427-201ENSMUST00000198188 331 ntBASIC2.17□□□□□ -2.06
Upf3aQ3ULJ3 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.17□□□□□ -2.06
Upf3aQ3ULJ3 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC2.17□□□□□ -2.06
Upf3aQ3ULJ3 AC102291.2-201ENSMUST00000228083 367 ntBASIC2.17□□□□□ -2.06
Upf3aQ3ULJ3 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Upf3aQ3ULJ3 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Upf3aQ3ULJ3 Mir465c-1-201ENSMUST00000093560 81 ntBASIC2.17□□□□□ -2.06
Upf3aQ3ULJ3 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.17□□□□□ -2.06
Upf3aQ3ULJ3 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Upf3aQ3ULJ3 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Upf3aQ3ULJ3 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Upf3aQ3ULJ3 Gm22083-201ENSMUST00000157586 102 ntBASIC2.16□□□□□ -2.06
Upf3aQ3ULJ3 Gm22554-201ENSMUST00000157798 147 ntBASIC2.16□□□□□ -2.06
Upf3aQ3ULJ3 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Upf3aQ3ULJ3 Gm24264-201ENSMUST00000179835 94 ntBASIC2.16□□□□□ -2.06
Upf3aQ3ULJ3 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC2.16□□□□□ -2.06
Upf3aQ3ULJ3 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC2.16□□□□□ -2.06
Upf3aQ3ULJ3 Gm43556-201ENSMUST00000196186 681 ntBASIC2.16□□□□□ -2.06
Upf3aQ3ULJ3 Gm42509-201ENSMUST00000197390 781 ntBASIC2.16□□□□□ -2.06
Upf3aQ3ULJ3 Igkv1-136-201ENSMUST00000200635 297 ntBASIC2.16□□□□□ -2.06
Upf3aQ3ULJ3 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.16□□□□□ -2.06
Upf3aQ3ULJ3 Gm2628-201ENSMUST00000218019 426 ntBASIC2.16□□□□□ -2.06
Upf3aQ3ULJ3 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Upf3aQ3ULJ3 Gm22810-201ENSMUST00000082741 158 ntBASIC2.16□□□□□ -2.06
Upf3aQ3ULJ3 Gm22508-201ENSMUST00000082772 110 ntBASIC2.16□□□□□ -2.06
Upf3aQ3ULJ3 Gm23247-201ENSMUST00000083373 107 ntBASIC2.16□□□□□ -2.06
Upf3aQ3ULJ3 Gm22723-201ENSMUST00000083820 129 ntBASIC2.16□□□□□ -2.06
Upf3aQ3ULJ3 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC2.16□□□□□ -2.06
Upf3aQ3ULJ3 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Upf3aQ3ULJ3 AC134917.1-201ENSMUST00000220517 1449 ntBASIC2.16□□□□□ -2.06
Upf3aQ3ULJ3 Gm26154-201ENSMUST00000102339 96 ntBASIC2.15□□□□□ -2.07
Upf3aQ3ULJ3 Gm13510-201ENSMUST00000118659 429 ntBASIC2.15□□□□□ -2.07
Upf3aQ3ULJ3 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC2.15□□□□□ -2.07
Upf3aQ3ULJ3 Gm16510-201ENSMUST00000153501 249 ntBASIC2.15□□□□□ -2.07
Upf3aQ3ULJ3 Gm24784-201ENSMUST00000157640 62 ntBASIC2.15□□□□□ -2.07
Upf3aQ3ULJ3 Gm24439-201ENSMUST00000157894 117 ntBASIC2.15□□□□□ -2.07
Upf3aQ3ULJ3 Gm22098-201ENSMUST00000157930 85 ntBASIC2.15□□□□□ -2.07
Upf3aQ3ULJ3 Gm24394-201ENSMUST00000158141 123 ntBASIC2.15□□□□□ -2.07
Upf3aQ3ULJ3 Gm22076-201ENSMUST00000158601 84 ntBASIC2.15□□□□□ -2.07
Upf3aQ3ULJ3 Gm22891-201ENSMUST00000158641 164 ntBASIC2.15□□□□□ -2.07
Upf3aQ3ULJ3 Gm24304-201ENSMUST00000177635 107 ntBASIC2.15□□□□□ -2.07
Upf3aQ3ULJ3 Gm22290-201ENSMUST00000177655 107 ntBASIC2.15□□□□□ -2.07
Upf3aQ3ULJ3 Gm22583-201ENSMUST00000178031 107 ntBASIC2.15□□□□□ -2.07
Upf3aQ3ULJ3 Gm25361-201ENSMUST00000179358 76 ntBASIC2.15□□□□□ -2.07
Upf3aQ3ULJ3 Gm24464-201ENSMUST00000179697 107 ntBASIC2.15□□□□□ -2.07
Upf3aQ3ULJ3 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.15□□□□□ -2.07
Upf3aQ3ULJ3 Gm28299-201ENSMUST00000189908 339 ntBASIC2.15□□□□□ -2.07
Upf3aQ3ULJ3 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Upf3aQ3ULJ3 Gm37727-201ENSMUST00000191637 819 ntBASIC2.15□□□□□ -2.07
Upf3aQ3ULJ3 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.15□□□□□ -2.07
Upf3aQ3ULJ3 Igkv4-65-201ENSMUST00000196986 358 ntBASIC2.15□□□□□ -2.07
Upf3aQ3ULJ3 Gm45101-201ENSMUST00000208327 232 ntBASIC2.15□□□□□ -2.07
Upf3aQ3ULJ3 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC2.15□□□□□ -2.07
Upf3aQ3ULJ3 AC153541.1-201ENSMUST00000213786 294 ntBASIC2.15□□□□□ -2.07
Upf3aQ3ULJ3 AC153957.1-201ENSMUST00000215235 229 ntBASIC2.15□□□□□ -2.07
Upf3aQ3ULJ3 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.15□□□□□ -2.07
Upf3aQ3ULJ3 Gm26922-201ENSMUST00000082687 72 ntBASIC2.15□□□□□ -2.07
Upf3aQ3ULJ3 Gm23741-201ENSMUST00000097237 171 ntBASIC2.15□□□□□ -2.07
Upf3aQ3ULJ3 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.14□□□□□ -2.07
Upf3aQ3ULJ3 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.14□□□□□ -2.07
Upf3aQ3ULJ3 AC122887.2-201ENSMUST00000219465 1603 ntBASIC2.14□□□□□ -2.07
Upf3aQ3ULJ3 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Upf3aQ3ULJ3 Gm25876-201ENSMUST00000104329 119 ntBASIC2.14□□□□□ -2.07
Upf3aQ3ULJ3 Gm26474-201ENSMUST00000116762 122 ntBASIC2.14□□□□□ -2.07
Upf3aQ3ULJ3 Gm14417-201ENSMUST00000120036 1074 ntBASIC2.14□□□□□ -2.07
Upf3aQ3ULJ3 Gm14785-201ENSMUST00000120185 539 ntBASIC2.14□□□□□ -2.07
Upf3aQ3ULJ3 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC2.14□□□□□ -2.07
Upf3aQ3ULJ3 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Upf3aQ3ULJ3 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
Upf3aQ3ULJ3 Gm22727-201ENSMUST00000158090 116 ntBASIC2.14□□□□□ -2.07
Upf3aQ3ULJ3 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Upf3aQ3ULJ3 Gm9071-201ENSMUST00000165915 474 ntBASIC2.14□□□□□ -2.07
Upf3aQ3ULJ3 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
Upf3aQ3ULJ3 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms