Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Limch1Q3UH68 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
Limch1Q3UH68 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
Limch1Q3UH68 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC4.46□□□□□ -1.7
Limch1Q3UH68 Gm25879-201ENSMUST00000104330 107 ntBASIC4.46□□□□□ -1.7
Limch1Q3UH68 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Limch1Q3UH68 Gm15268-201ENSMUST00000118845 352 ntBASIC4.46□□□□□ -1.7
Limch1Q3UH68 Gm22027-201ENSMUST00000122737 127 ntBASIC4.46□□□□□ -1.7
Limch1Q3UH68 Gm25051-201ENSMUST00000158602 249 ntBASIC4.46□□□□□ -1.7
Limch1Q3UH68 Gm26028-201ENSMUST00000158660 294 ntBASIC4.46□□□□□ -1.7
Limch1Q3UH68 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC4.46□□□□□ -1.7
Limch1Q3UH68 Gm22450-201ENSMUST00000179641 107 ntBASIC4.46□□□□□ -1.7
Limch1Q3UH68 Gm25473-201ENSMUST00000180191 107 ntBASIC4.46□□□□□ -1.7
Limch1Q3UH68 Gm37239-201ENSMUST00000193510 141 ntBASIC4.46□□□□□ -1.7
Limch1Q3UH68 Gm7041-201ENSMUST00000201227 524 ntBASIC4.46□□□□□ -1.7
Limch1Q3UH68 Gm44519-201ENSMUST00000206486 122 ntBASIC4.46□□□□□ -1.7
Limch1Q3UH68 Gm44859-201ENSMUST00000207831 94 ntBASIC4.46□□□□□ -1.7
Limch1Q3UH68 Gm45162-201ENSMUST00000209013 618 ntBASIC4.46□□□□□ -1.7
Limch1Q3UH68 AC100590.2-201ENSMUST00000219028 215 ntBASIC4.46□□□□□ -1.7
Limch1Q3UH68 AC160865.1-201ENSMUST00000219873 151 ntBASIC4.46□□□□□ -1.7
Limch1Q3UH68 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC4.46□□□□□ -1.7
Limch1Q3UH68 AC124581.4-201ENSMUST00000225874 463 ntBASIC4.46□□□□□ -1.7
Limch1Q3UH68 Gm26071-201ENSMUST00000083261 107 ntBASIC4.46□□□□□ -1.7
Limch1Q3UH68 Gm25896-201ENSMUST00000083713 136 ntBASIC4.46□□□□□ -1.7
Limch1Q3UH68 Gm24521-201ENSMUST00000083958 107 ntBASIC4.46□□□□□ -1.7
Limch1Q3UH68 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Limch1Q3UH68 Gm37941-201ENSMUST00000192170 2309 ntBASIC4.46□□□□□ -1.7
Limch1Q3UH68 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Limch1Q3UH68 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.7
Limch1Q3UH68 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Limch1Q3UH68 Gm43508-201ENSMUST00000197251 3783 ntBASIC4.45□□□□□ -1.7
Limch1Q3UH68 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Limch1Q3UH68 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
Limch1Q3UH68 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
Limch1Q3UH68 Gm45093-201ENSMUST00000206859 2463 ntBASIC4.45□□□□□ -1.7
Limch1Q3UH68 Gm23697-201ENSMUST00000103897 110 ntBASIC4.45□□□□□ -1.7
Limch1Q3UH68 Mir294-201ENSMUST00000104710 84 ntBASIC4.45□□□□□ -1.7
Limch1Q3UH68 Gm11065-201ENSMUST00000111462 228 ntBASIC4.45□□□□□ -1.7
Limch1Q3UH68 Gm15180-201ENSMUST00000117745 492 ntBASIC4.45□□□□□ -1.7
Limch1Q3UH68 Gm12793-201ENSMUST00000119268 292 ntBASIC4.45□□□□□ -1.7
Limch1Q3UH68 Gm5937-201ENSMUST00000119715 643 ntBASIC4.45□□□□□ -1.7
Limch1Q3UH68 Gm15926-201ENSMUST00000120492 550 ntBASIC4.45□□□□□ -1.7
Limch1Q3UH68 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC4.45□□□□□ -1.7
Limch1Q3UH68 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC4.45□□□□□ -1.7
Limch1Q3UH68 Gm22315-201ENSMUST00000158010 143 ntBASIC4.45□□□□□ -1.7
Limch1Q3UH68 Gm23196-201ENSMUST00000158806 107 ntBASIC4.45□□□□□ -1.7
Limch1Q3UH68 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Limch1Q3UH68 Mir3070b-201ENSMUST00000175205 89 ntBASIC4.45□□□□□ -1.7
Limch1Q3UH68 Mir6408-201ENSMUST00000183643 91 ntBASIC4.45□□□□□ -1.7
Limch1Q3UH68 Gm5329-201ENSMUST00000186898 463 ntBASIC4.45□□□□□ -1.7
Limch1Q3UH68 Gm6842-201ENSMUST00000211361 390 ntBASIC4.45□□□□□ -1.7
Limch1Q3UH68 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC4.45□□□□□ -1.7
Limch1Q3UH68 AC162934.1-201ENSMUST00000222880 309 ntBASIC4.45□□□□□ -1.7
Limch1Q3UH68 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Limch1Q3UH68 Gm26449-201ENSMUST00000082452 104 ntBASIC4.45□□□□□ -1.7
Limch1Q3UH68 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Limch1Q3UH68 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Limch1Q3UH68 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Limch1Q3UH68 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Limch1Q3UH68 Gm21033-201ENSMUST00000208590 2608 ntBASIC4.44□□□□□ -1.7
Limch1Q3UH68 Gm9343-201ENSMUST00000209016 2609 ntBASIC4.44□□□□□ -1.7
Limch1Q3UH68 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Limch1Q3UH68 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Limch1Q3UH68 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Limch1Q3UH68 Gm3623-201ENSMUST00000173643 2747 ntBASIC4.44□□□□□ -1.7
Limch1Q3UH68 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Limch1Q3UH68 Gm14894-201ENSMUST00000117170 270 ntBASIC4.44□□□□□ -1.7
Limch1Q3UH68 Gm6079-201ENSMUST00000121356 404 ntBASIC4.44□□□□□ -1.7
Limch1Q3UH68 Gm13210-201ENSMUST00000121483 273 ntBASIC4.44□□□□□ -1.7
Limch1Q3UH68 Gm15065-201ENSMUST00000121699 273 ntBASIC4.44□□□□□ -1.7
Limch1Q3UH68 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC4.44□□□□□ -1.7
Limch1Q3UH68 Gm23640-201ENSMUST00000157860 104 ntBASIC4.44□□□□□ -1.7
Limch1Q3UH68 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Limch1Q3UH68 Gm24084-201ENSMUST00000175173 137 ntBASIC4.44□□□□□ -1.7
Limch1Q3UH68 Gm24799-201ENSMUST00000178431 79 ntBASIC4.44□□□□□ -1.7
Limch1Q3UH68 Gm37449-201ENSMUST00000193016 270 ntBASIC4.44□□□□□ -1.7
Limch1Q3UH68 Gm18658-201ENSMUST00000195558 270 ntBASIC4.44□□□□□ -1.7
Limch1Q3UH68 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC4.44□□□□□ -1.7
Limch1Q3UH68 Gm43427-201ENSMUST00000198188 331 ntBASIC4.44□□□□□ -1.7
Limch1Q3UH68 Gm43978-201ENSMUST00000203491 451 ntBASIC4.44□□□□□ -1.7
Limch1Q3UH68 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC4.44□□□□□ -1.7
Limch1Q3UH68 AC140785.1-201ENSMUST00000217782 383 ntBASIC4.44□□□□□ -1.7
Limch1Q3UH68 Gm18441-201ENSMUST00000223539 617 ntBASIC4.44□□□□□ -1.7
Limch1Q3UH68 AC115735.2-201ENSMUST00000227135 351 ntBASIC4.44□□□□□ -1.7
Limch1Q3UH68 AC134577.1-201ENSMUST00000227572 295 ntBASIC4.44□□□□□ -1.7
Limch1Q3UH68 AC123860.1-201ENSMUST00000228033 481 ntBASIC4.44□□□□□ -1.7
Limch1Q3UH68 Snora7a-201ENSMUST00000082629 140 ntBASIC4.44□□□□□ -1.7
Limch1Q3UH68 Gm26314-201ENSMUST00000083891 107 ntBASIC4.44□□□□□ -1.7
Limch1Q3UH68 Gm37176-201ENSMUST00000193300 4051 ntBASIC4.44□□□□□ -1.7
Limch1Q3UH68 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Limch1Q3UH68 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
Limch1Q3UH68 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Limch1Q3UH68 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC4.44□□□□□ -1.7
Limch1Q3UH68 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Limch1Q3UH68 Gm18609-201ENSMUST00000203370 3601 ntBASIC4.44□□□□□ -1.7
Limch1Q3UH68 Gm42870-201ENSMUST00000199355 3470 ntBASIC4.43□□□□□ -1.7
Limch1Q3UH68 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
Limch1Q3UH68 Gm15613-201ENSMUST00000118396 326 ntBASIC4.43□□□□□ -1.7
Limch1Q3UH68 Gm12797-201ENSMUST00000118645 273 ntBASIC4.43□□□□□ -1.7
Limch1Q3UH68 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 92.2 ms