Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC2.35□□□□□ -2.03
Trafd1Q3UDK1 Gm18291-201ENSMUST00000190791 301 ntBASIC2.35□□□□□ -2.03
Trafd1Q3UDK1 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Trafd1Q3UDK1 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.35□□□□□ -2.03
Trafd1Q3UDK1 Gm44041-201ENSMUST00000203678 396 ntBASIC2.35□□□□□ -2.03
Trafd1Q3UDK1 Gm43955-201ENSMUST00000204332 142 ntBASIC2.35□□□□□ -2.03
Trafd1Q3UDK1 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC2.35□□□□□ -2.03
Trafd1Q3UDK1 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC2.35□□□□□ -2.03
Trafd1Q3UDK1 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC2.35□□□□□ -2.03
Trafd1Q3UDK1 AC131720.2-201ENSMUST00000220420 431 ntBASIC2.35□□□□□ -2.03
Trafd1Q3UDK1 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Trafd1Q3UDK1 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Trafd1Q3UDK1 Gm43663-201ENSMUST00000198643 1505 ntBASIC2.34□□□□□ -2.03
Trafd1Q3UDK1 Gm37903-201ENSMUST00000192122 2381 ntBASIC2.34□□□□□ -2.03
Trafd1Q3UDK1 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Trafd1Q3UDK1 Gm13756-201ENSMUST00000117618 222 ntBASIC2.34□□□□□ -2.03
Trafd1Q3UDK1 Gm11460-201ENSMUST00000118200 361 ntBASIC2.34□□□□□ -2.03
Trafd1Q3UDK1 Gm15936-201ENSMUST00000118706 460 ntBASIC2.34□□□□□ -2.03
Trafd1Q3UDK1 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC2.34□□□□□ -2.03
Trafd1Q3UDK1 Gm15167-201ENSMUST00000121997 187 ntBASIC2.34□□□□□ -2.03
Trafd1Q3UDK1 n-R5s80-201ENSMUST00000122596 111 ntBASIC2.34□□□□□ -2.03
Trafd1Q3UDK1 Gm24959-201ENSMUST00000157924 146 ntBASIC2.34□□□□□ -2.03
Trafd1Q3UDK1 Gm25866-201ENSMUST00000158245 112 ntBASIC2.34□□□□□ -2.03
Trafd1Q3UDK1 Gm22664-201ENSMUST00000158719 105 ntBASIC2.34□□□□□ -2.03
Trafd1Q3UDK1 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Trafd1Q3UDK1 Gm20698-201ENSMUST00000175657 233 ntBASIC2.34□□□□□ -2.03
Trafd1Q3UDK1 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Trafd1Q3UDK1 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Trafd1Q3UDK1 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Trafd1Q3UDK1 Mir6335-201ENSMUST00000184081 98 ntBASIC2.34□□□□□ -2.03
Trafd1Q3UDK1 Gm27869-201ENSMUST00000184327 122 ntBASIC2.34□□□□□ -2.03
Trafd1Q3UDK1 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC2.34□□□□□ -2.03
Trafd1Q3UDK1 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Trafd1Q3UDK1 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC2.34□□□□□ -2.03
Trafd1Q3UDK1 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
Trafd1Q3UDK1 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Trafd1Q3UDK1 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC2.34□□□□□ -2.03
Trafd1Q3UDK1 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC2.34□□□□□ -2.03
Trafd1Q3UDK1 Gm23614-201ENSMUST00000082598 107 ntBASIC2.34□□□□□ -2.03
Trafd1Q3UDK1 Mir103-2-201ENSMUST00000083629 86 ntBASIC2.34□□□□□ -2.03
Trafd1Q3UDK1 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
Trafd1Q3UDK1 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Trafd1Q3UDK1 Gm14906-201ENSMUST00000119265 390 ntBASIC2.33□□□□□ -2.04
Trafd1Q3UDK1 Gm14593-201ENSMUST00000119948 294 ntBASIC2.33□□□□□ -2.04
Trafd1Q3UDK1 Gm16411-201ENSMUST00000122164 1100 ntBASIC2.33□□□□□ -2.04
Trafd1Q3UDK1 Gm15899-201ENSMUST00000128586 238 ntBASIC2.33□□□□□ -2.04
Trafd1Q3UDK1 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC2.33□□□□□ -2.04
Trafd1Q3UDK1 Gm26280-201ENSMUST00000157096 101 ntBASIC2.33□□□□□ -2.04
Trafd1Q3UDK1 Gm22560-201ENSMUST00000157332 120 ntBASIC2.33□□□□□ -2.04
Trafd1Q3UDK1 Gm22534-201ENSMUST00000158173 104 ntBASIC2.33□□□□□ -2.04
Trafd1Q3UDK1 Gm23704-201ENSMUST00000158844 340 ntBASIC2.33□□□□□ -2.04
Trafd1Q3UDK1 Gm20689-201ENSMUST00000176033 279 ntBASIC2.33□□□□□ -2.04
Trafd1Q3UDK1 Gm24418-201ENSMUST00000177597 79 ntBASIC2.33□□□□□ -2.04
Trafd1Q3UDK1 Gm24639-201ENSMUST00000178518 79 ntBASIC2.33□□□□□ -2.04
Trafd1Q3UDK1 Gm23076-201ENSMUST00000179082 79 ntBASIC2.33□□□□□ -2.04
Trafd1Q3UDK1 Gm25077-201ENSMUST00000179157 79 ntBASIC2.33□□□□□ -2.04
Trafd1Q3UDK1 Gm27582-201ENSMUST00000184084 126 ntBASIC2.33□□□□□ -2.04
Trafd1Q3UDK1 Gm7329-201ENSMUST00000185915 210 ntBASIC2.33□□□□□ -2.04
Trafd1Q3UDK1 Gm29335-201ENSMUST00000188361 459 ntBASIC2.33□□□□□ -2.04
Trafd1Q3UDK1 Mir7232-201ENSMUST00000197929 74 ntBASIC2.33□□□□□ -2.04
Trafd1Q3UDK1 Mir378a-201ENSMUST00000198300 66 ntBASIC2.33□□□□□ -2.04
Trafd1Q3UDK1 Gm7039-201ENSMUST00000205138 346 ntBASIC2.33□□□□□ -2.04
Trafd1Q3UDK1 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC2.33□□□□□ -2.04
Trafd1Q3UDK1 Gm45252-201ENSMUST00000211579 397 ntBASIC2.33□□□□□ -2.04
Trafd1Q3UDK1 AC166358.10-201ENSMUST00000220556 144 ntBASIC2.33□□□□□ -2.04
Trafd1Q3UDK1 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC2.33□□□□□ -2.04
Trafd1Q3UDK1 Gm46389-201ENSMUST00000223199 392 ntBASIC2.33□□□□□ -2.04
Trafd1Q3UDK1 AC117202.3-201ENSMUST00000228532 310 ntBASIC2.33□□□□□ -2.04
Trafd1Q3UDK1 Gm24313-201ENSMUST00000082561 133 ntBASIC2.33□□□□□ -2.04
Trafd1Q3UDK1 Gm24045-201ENSMUST00000083113 98 ntBASIC2.33□□□□□ -2.04
Trafd1Q3UDK1 Gm24661-201ENSMUST00000083205 104 ntBASIC2.33□□□□□ -2.04
Trafd1Q3UDK1 Gm23093-201ENSMUST00000083450 102 ntBASIC2.33□□□□□ -2.04
Trafd1Q3UDK1 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC2.33□□□□□ -2.04
Trafd1Q3UDK1 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC2.33□□□□□ -2.04
Trafd1Q3UDK1 Gm37598-201ENSMUST00000194506 1301 ntBASIC2.33□□□□□ -2.04
Trafd1Q3UDK1 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
Trafd1Q3UDK1 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Trafd1Q3UDK1 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
Trafd1Q3UDK1 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
Trafd1Q3UDK1 Gm25509-201ENSMUST00000116985 106 ntBASIC2.32□□□□□ -2.04
Trafd1Q3UDK1 Gm14940-201ENSMUST00000119309 495 ntBASIC2.32□□□□□ -2.04
Trafd1Q3UDK1 Gm13541-201ENSMUST00000119519 283 ntBASIC2.32□□□□□ -2.04
Trafd1Q3UDK1 Gm23889-201ENSMUST00000122689 104 ntBASIC2.32□□□□□ -2.04
Trafd1Q3UDK1 Gm14364-201ENSMUST00000129209 267 ntBASIC2.32□□□□□ -2.04
Trafd1Q3UDK1 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Trafd1Q3UDK1 Gm15900-201ENSMUST00000161584 342 ntBASIC2.32□□□□□ -2.04
Trafd1Q3UDK1 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Trafd1Q3UDK1 Gm2719-201ENSMUST00000191929 444 ntBASIC2.32□□□□□ -2.04
Trafd1Q3UDK1 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.32□□□□□ -2.04
Trafd1Q3UDK1 Gm44161-201ENSMUST00000203532 253 ntBASIC2.32□□□□□ -2.04
Trafd1Q3UDK1 Gm19252-201ENSMUST00000204705 305 ntBASIC2.32□□□□□ -2.04
Trafd1Q3UDK1 Gm6796-201ENSMUST00000211919 243 ntBASIC2.32□□□□□ -2.04
Trafd1Q3UDK1 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.32□□□□□ -2.04
Trafd1Q3UDK1 CT030187.1-201ENSMUST00000220605 252 ntBASIC2.32□□□□□ -2.04
Trafd1Q3UDK1 Gm46312-201ENSMUST00000220961 420 ntBASIC2.32□□□□□ -2.04
Trafd1Q3UDK1 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.32□□□□□ -2.04
Trafd1Q3UDK1 Gm22247-201ENSMUST00000082476 131 ntBASIC2.32□□□□□ -2.04
Trafd1Q3UDK1 Mir127-201ENSMUST00000093568 70 ntBASIC2.32□□□□□ -2.04
Trafd1Q3UDK1 Gm44821-201ENSMUST00000208212 2002 ntBASIC2.32□□□□□ -2.04
Trafd1Q3UDK1 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms