Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Ddb1Q3U1J4 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Ddb1Q3U1J4 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Ddb1Q3U1J4 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Ddb1Q3U1J4 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Ddb1Q3U1J4 Gm25485-201ENSMUST00000104120 132 ntBASIC3.92□□□□□ -1.78
Ddb1Q3U1J4 Gm14013-201ENSMUST00000119006 270 ntBASIC3.92□□□□□ -1.78
Ddb1Q3U1J4 Gm22073-201ENSMUST00000122668 189 ntBASIC3.92□□□□□ -1.78
Ddb1Q3U1J4 n-R5s216-201ENSMUST00000122755 112 ntBASIC3.92□□□□□ -1.78
Ddb1Q3U1J4 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Ddb1Q3U1J4 Mir5118-201ENSMUST00000175551 67 ntBASIC3.92□□□□□ -1.78
Ddb1Q3U1J4 Gm27379-201ENSMUST00000183730 123 ntBASIC3.92□□□□□ -1.78
Ddb1Q3U1J4 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC3.92□□□□□ -1.78
Ddb1Q3U1J4 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Ddb1Q3U1J4 Ighv2-8-201ENSMUST00000193935 262 ntBASIC3.92□□□□□ -1.78
Ddb1Q3U1J4 Gm42647-201ENSMUST00000195939 459 ntBASIC3.92□□□□□ -1.78
Ddb1Q3U1J4 Gm43115-201ENSMUST00000196244 160 ntBASIC3.92□□□□□ -1.78
Ddb1Q3U1J4 Gm43393-201ENSMUST00000200147 194 ntBASIC3.92□□□□□ -1.78
Ddb1Q3U1J4 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC3.92□□□□□ -1.78
Ddb1Q3U1J4 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.92□□□□□ -1.78
Ddb1Q3U1J4 Gm44657-201ENSMUST00000208568 450 ntBASIC3.92□□□□□ -1.78
Ddb1Q3U1J4 CT009713.6-201ENSMUST00000223615 294 ntBASIC3.92□□□□□ -1.78
Ddb1Q3U1J4 AC154506.1-201ENSMUST00000225178 621 ntBASIC3.92□□□□□ -1.78
Ddb1Q3U1J4 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Ddb1Q3U1J4 Gm19428-201ENSMUST00000220512 1995 ntBASIC3.92□□□□□ -1.78
Ddb1Q3U1J4 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Ddb1Q3U1J4 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
Ddb1Q3U1J4 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Ddb1Q3U1J4 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Ddb1Q3U1J4 Gm12235-201ENSMUST00000118596 170 ntBASIC3.91□□□□□ -1.78
Ddb1Q3U1J4 Gm13155-201ENSMUST00000119277 646 ntBASIC3.91□□□□□ -1.78
Ddb1Q3U1J4 Gm8178-201ENSMUST00000121570 646 ntBASIC3.91□□□□□ -1.78
Ddb1Q3U1J4 Gm25391-201ENSMUST00000157342 134 ntBASIC3.91□□□□□ -1.78
Ddb1Q3U1J4 Gm26149-201ENSMUST00000157432 108 ntBASIC3.91□□□□□ -1.78
Ddb1Q3U1J4 Gm8580-201ENSMUST00000160295 464 ntBASIC3.91□□□□□ -1.78
Ddb1Q3U1J4 Gm17166-201ENSMUST00000172006 431 ntBASIC3.91□□□□□ -1.78
Ddb1Q3U1J4 Gm28755-201ENSMUST00000185773 199 ntBASIC3.91□□□□□ -1.78
Ddb1Q3U1J4 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.91□□□□□ -1.78
Ddb1Q3U1J4 Gm2077-201ENSMUST00000195017 319 ntBASIC3.91□□□□□ -1.78
Ddb1Q3U1J4 Gm44446-201ENSMUST00000204864 255 ntBASIC3.91□□□□□ -1.78
Ddb1Q3U1J4 Olfr1285-201ENSMUST00000208523 903 ntBASIC3.91□□□□□ -1.78
Ddb1Q3U1J4 Gm30674-201ENSMUST00000214523 392 ntBASIC3.91□□□□□ -1.78
Ddb1Q3U1J4 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC3.91□□□□□ -1.78
Ddb1Q3U1J4 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC3.91□□□□□ -1.78
Ddb1Q3U1J4 AC124772.1-201ENSMUST00000221325 151 ntBASIC3.91□□□□□ -1.78
Ddb1Q3U1J4 Gm25801-201ENSMUST00000082638 106 ntBASIC3.91□□□□□ -1.78
Ddb1Q3U1J4 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Ddb1Q3U1J4 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.91□□□□□ -1.78
Ddb1Q3U1J4 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Ddb1Q3U1J4 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
Ddb1Q3U1J4 Gm21032-201ENSMUST00000208108 2578 ntBASIC3.9□□□□□ -1.78
Ddb1Q3U1J4 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.9□□□□□ -1.79
Ddb1Q3U1J4 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Ddb1Q3U1J4 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Ddb1Q3U1J4 Mir291a-201ENSMUST00000104815 82 ntBASIC3.9□□□□□ -1.79
Ddb1Q3U1J4 Gm12723-201ENSMUST00000120700 451 ntBASIC3.9□□□□□ -1.79
Ddb1Q3U1J4 Gm15223-201ENSMUST00000120989 826 ntBASIC3.9□□□□□ -1.79
Ddb1Q3U1J4 Gm14761-201ENSMUST00000121363 262 ntBASIC3.9□□□□□ -1.79
Ddb1Q3U1J4 Gm23542-201ENSMUST00000158208 96 ntBASIC3.9□□□□□ -1.79
Ddb1Q3U1J4 Gm8114-201ENSMUST00000172225 484 ntBASIC3.9□□□□□ -1.79
Ddb1Q3U1J4 Gm24816-201ENSMUST00000175311 151 ntBASIC3.9□□□□□ -1.79
Ddb1Q3U1J4 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC3.9□□□□□ -1.79
Ddb1Q3U1J4 Mir8096-201ENSMUST00000184526 127 ntBASIC3.9□□□□□ -1.79
Ddb1Q3U1J4 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.9□□□□□ -1.79
Ddb1Q3U1J4 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.9□□□□□ -1.79
Ddb1Q3U1J4 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.9□□□□□ -1.79
Ddb1Q3U1J4 Gm43284-201ENSMUST00000200103 253 ntBASIC3.9□□□□□ -1.79
Ddb1Q3U1J4 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Ddb1Q3U1J4 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.9□□□□□ -1.79
Ddb1Q3U1J4 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC3.9□□□□□ -1.79
Ddb1Q3U1J4 Gm44655-201ENSMUST00000207768 423 ntBASIC3.9□□□□□ -1.79
Ddb1Q3U1J4 CT572985.2-201ENSMUST00000220496 211 ntBASIC3.9□□□□□ -1.79
Ddb1Q3U1J4 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Ddb1Q3U1J4 AC158395.1-201ENSMUST00000227206 452 ntBASIC3.9□□□□□ -1.79
Ddb1Q3U1J4 Mir10a-201ENSMUST00000083585 110 ntBASIC3.9□□□□□ -1.79
Ddb1Q3U1J4 Gm24764-201ENSMUST00000083686 199 ntBASIC3.9□□□□□ -1.79
Ddb1Q3U1J4 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
Ddb1Q3U1J4 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Ddb1Q3U1J4 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Ddb1Q3U1J4 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Ddb1Q3U1J4 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.89□□□□□ -1.79
Ddb1Q3U1J4 Gm25943-201ENSMUST00000103791 90 ntBASIC3.89□□□□□ -1.79
Ddb1Q3U1J4 Mir466b-7-201ENSMUST00000103804 88 ntBASIC3.89□□□□□ -1.79
Ddb1Q3U1J4 Mir466b-5-201ENSMUST00000103900 88 ntBASIC3.89□□□□□ -1.79
Ddb1Q3U1J4 Gm25220-201ENSMUST00000157546 95 ntBASIC3.89□□□□□ -1.79
Ddb1Q3U1J4 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC3.89□□□□□ -1.79
Ddb1Q3U1J4 Mir466b-4-201ENSMUST00000178801 90 ntBASIC3.89□□□□□ -1.79
Ddb1Q3U1J4 Gm25285-201ENSMUST00000178951 90 ntBASIC3.89□□□□□ -1.79
Ddb1Q3U1J4 Mir466b-6-201ENSMUST00000180061 90 ntBASIC3.89□□□□□ -1.79
Ddb1Q3U1J4 Mir466c-2-201ENSMUST00000180211 90 ntBASIC3.89□□□□□ -1.79
Ddb1Q3U1J4 Gm18551-201ENSMUST00000195594 642 ntBASIC3.89□□□□□ -1.79
Ddb1Q3U1J4 Gm44063-201ENSMUST00000203307 376 ntBASIC3.89□□□□□ -1.79
Ddb1Q3U1J4 Gm44858-201ENSMUST00000207360 154 ntBASIC3.89□□□□□ -1.79
Ddb1Q3U1J4 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC3.89□□□□□ -1.79
Ddb1Q3U1J4 Gm33654-201ENSMUST00000221704 215 ntBASIC3.89□□□□□ -1.79
Ddb1Q3U1J4 Gm21937-201ENSMUST00000222825 218 ntBASIC3.89□□□□□ -1.79
Ddb1Q3U1J4 AC126440.1-201ENSMUST00000227098 349 ntBASIC3.89□□□□□ -1.79
Ddb1Q3U1J4 Snora31-201ENSMUST00000083213 130 ntBASIC3.89□□□□□ -1.79
Ddb1Q3U1J4 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC3.89□□□□□ -1.79
Ddb1Q3U1J4 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms