Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm24463-201ENSMUST00000178417 72 ntBASIC4.71□□□□□ -1.66
Col9a1Q05722 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC4.71□□□□□ -1.66
Col9a1Q05722 Gm44354-201ENSMUST00000196017 143 ntBASIC4.71□□□□□ -1.66
Col9a1Q05722 AC166369.3-201ENSMUST00000227286 409 ntBASIC4.71□□□□□ -1.66
Col9a1Q05722 Gm4945-201ENSMUST00000075152 453 ntBASIC4.71□□□□□ -1.66
Col9a1Q05722 mt-Ta-201ENSMUST00000082398 69 ntBASIC4.71□□□□□ -1.66
Col9a1Q05722 Gm25681-201ENSMUST00000083938 106 ntBASIC4.71□□□□□ -1.66
Col9a1Q05722 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Col9a1Q05722 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Col9a1Q05722 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
Col9a1Q05722 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Col9a1Q05722 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Col9a1Q05722 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col9a1Q05722 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Col9a1Q05722 Gm11786-201ENSMUST00000120799 155 ntBASIC4.7□□□□□ -1.66
Col9a1Q05722 Gm24747-201ENSMUST00000157835 87 ntBASIC4.7□□□□□ -1.66
Col9a1Q05722 Gm22483-201ENSMUST00000157986 274 ntBASIC4.7□□□□□ -1.66
Col9a1Q05722 Gm24842-201ENSMUST00000158681 54 ntBASIC4.7□□□□□ -1.66
Col9a1Q05722 Gm7258-201ENSMUST00000179317 300 ntBASIC4.7□□□□□ -1.66
Col9a1Q05722 Gm37281-201ENSMUST00000192412 439 ntBASIC4.7□□□□□ -1.66
Col9a1Q05722 Gm37037-201ENSMUST00000194475 424 ntBASIC4.7□□□□□ -1.66
Col9a1Q05722 Gm43381-201ENSMUST00000198553 165 ntBASIC4.7□□□□□ -1.66
Col9a1Q05722 AC156569.1-201ENSMUST00000222020 3841 ntBASIC4.7□□□□□ -1.66
Col9a1Q05722 AC166113.1-201ENSMUST00000225258 475 ntBASIC4.7□□□□□ -1.66
Col9a1Q05722 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col9a1Q05722 Gm24147-201ENSMUST00000082763 144 ntBASIC4.7□□□□□ -1.66
Col9a1Q05722 Gm23445-201ENSMUST00000082800 107 ntBASIC4.7□□□□□ -1.66
Col9a1Q05722 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Col9a1Q05722 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC4.7□□□□□ -1.66
Col9a1Q05722 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col9a1Q05722 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Col9a1Q05722 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Col9a1Q05722 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col9a1Q05722 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Col9a1Q05722 AC137871.4-201ENSMUST00000226323 3901 ntBASIC4.7□□□□□ -1.66
Col9a1Q05722 Gm43011-201ENSMUST00000197897 4433 ntBASIC4.7□□□□□ -1.66
Col9a1Q05722 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Col9a1Q05722 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Col9a1Q05722 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Col9a1Q05722 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col9a1Q05722 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC4.7□□□□□ -1.66
Col9a1Q05722 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col9a1Q05722 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col9a1Q05722 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
Col9a1Q05722 Gm29112-201ENSMUST00000188962 3487 ntBASIC4.69□□□□□ -1.66
Col9a1Q05722 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Col9a1Q05722 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Col9a1Q05722 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Col9a1Q05722 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col9a1Q05722 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col9a1Q05722 Gm12423-201ENSMUST00000118334 135 ntBASIC4.69□□□□□ -1.66
Col9a1Q05722 Gm13167-201ENSMUST00000118554 578 ntBASIC4.69□□□□□ -1.66
Col9a1Q05722 Gm22804-201ENSMUST00000158052 101 ntBASIC4.69□□□□□ -1.66
Col9a1Q05722 Gm25264-201ENSMUST00000158519 117 ntBASIC4.69□□□□□ -1.66
Col9a1Q05722 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col9a1Q05722 Gm13249-201ENSMUST00000177803 345 ntBASIC4.69□□□□□ -1.66
Col9a1Q05722 Gm13144-201ENSMUST00000179385 345 ntBASIC4.69□□□□□ -1.66
Col9a1Q05722 Gm10292-201ENSMUST00000183142 581 ntBASIC4.69□□□□□ -1.66
Col9a1Q05722 Gm27672-201ENSMUST00000183751 204 ntBASIC4.69□□□□□ -1.66
Col9a1Q05722 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.69□□□□□ -1.66
Col9a1Q05722 Mir6385-201ENSMUST00000184295 105 ntBASIC4.69□□□□□ -1.66
Col9a1Q05722 Gm45796-201ENSMUST00000212483 114 ntBASIC4.69□□□□□ -1.66
Col9a1Q05722 Mir338-201ENSMUST00000083666 98 ntBASIC4.69□□□□□ -1.66
Col9a1Q05722 Mir218-1-201ENSMUST00000083669 110 ntBASIC4.69□□□□□ -1.66
Col9a1Q05722 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col9a1Q05722 Gm37742-201ENSMUST00000193263 3979 ntBASIC4.69□□□□□ -1.66
Col9a1Q05722 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col9a1Q05722 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Col9a1Q05722 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Col9a1Q05722 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Col9a1Q05722 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col9a1Q05722 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
Col9a1Q05722 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col9a1Q05722 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col9a1Q05722 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Col9a1Q05722 Gm9911-201ENSMUST00000211467 2802 ntBASIC4.68□□□□□ -1.66
Col9a1Q05722 Gm23747-201ENSMUST00000104228 131 ntBASIC4.68□□□□□ -1.66
Col9a1Q05722 Gm23907-201ENSMUST00000104595 189 ntBASIC4.68□□□□□ -1.66
Col9a1Q05722 Gm22679-201ENSMUST00000116975 100 ntBASIC4.68□□□□□ -1.66
Col9a1Q05722 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC4.68□□□□□ -1.66
Col9a1Q05722 Gm11644-201ENSMUST00000119735 150 ntBASIC4.68□□□□□ -1.66
Col9a1Q05722 Gm22107-201ENSMUST00000122548 100 ntBASIC4.68□□□□□ -1.66
Col9a1Q05722 Gm24959-201ENSMUST00000157924 146 ntBASIC4.68□□□□□ -1.66
Col9a1Q05722 Gm22314-201ENSMUST00000158007 281 ntBASIC4.68□□□□□ -1.66
Col9a1Q05722 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC4.68□□□□□ -1.66
Col9a1Q05722 Gm18429-201ENSMUST00000198707 421 ntBASIC4.68□□□□□ -1.66
Col9a1Q05722 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC4.68□□□□□ -1.66
Col9a1Q05722 Gm45499-201ENSMUST00000211656 280 ntBASIC4.68□□□□□ -1.66
Col9a1Q05722 AC161054.1-201ENSMUST00000214319 184 ntBASIC4.68□□□□□ -1.66
Col9a1Q05722 CT030159.4-201ENSMUST00000221966 395 ntBASIC4.68□□□□□ -1.66
Col9a1Q05722 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Col9a1Q05722 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC4.68□□□□□ -1.66
Col9a1Q05722 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Col9a1Q05722 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col9a1Q05722 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col9a1Q05722 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col9a1Q05722 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col9a1Q05722 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC4.67□□□□□ -1.66
Col9a1Q05722 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Col9a1Q05722 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 497.8 ms