Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC3.39□□□□□ -1.87
Col8a1Q00780 AC160134.1-201ENSMUST00000213450 551 ntBASIC3.39□□□□□ -1.87
Col8a1Q00780 AC124739.2-201ENSMUST00000222201 109 ntBASIC3.39□□□□□ -1.87
Col8a1Q00780 AC122320.1-201ENSMUST00000227233 105 ntBASIC3.39□□□□□ -1.87
Col8a1Q00780 Gm9818-201ENSMUST00000050900 255 ntBASIC3.39□□□□□ -1.87
Col8a1Q00780 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Col8a1Q00780 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Col8a1Q00780 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Col8a1Q00780 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Col8a1Q00780 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
Col8a1Q00780 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Col8a1Q00780 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC3.39□□□□□ -1.87
Col8a1Q00780 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Col8a1Q00780 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Col8a1Q00780 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Col8a1Q00780 Gm42659-201ENSMUST00000196955 1754 ntBASIC3.38□□□□□ -1.87
Col8a1Q00780 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Col8a1Q00780 Gm10033-201ENSMUST00000072427 1813 ntBASIC3.38□□□□□ -1.87
Col8a1Q00780 Gm25105-201ENSMUST00000122477 130 ntBASIC3.38□□□□□ -1.87
Col8a1Q00780 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC3.38□□□□□ -1.87
Col8a1Q00780 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC3.38□□□□□ -1.87
Col8a1Q00780 Gm22380-201ENSMUST00000157479 95 ntBASIC3.38□□□□□ -1.87
Col8a1Q00780 Gm25436-201ENSMUST00000158275 145 ntBASIC3.38□□□□□ -1.87
Col8a1Q00780 Gm23197-201ENSMUST00000158809 112 ntBASIC3.38□□□□□ -1.87
Col8a1Q00780 Gm25835-201ENSMUST00000158917 144 ntBASIC3.38□□□□□ -1.87
Col8a1Q00780 Gm26337-201ENSMUST00000178000 79 ntBASIC3.38□□□□□ -1.87
Col8a1Q00780 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Col8a1Q00780 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC3.38□□□□□ -1.87
Col8a1Q00780 Gm42855-201ENSMUST00000197388 253 ntBASIC3.38□□□□□ -1.87
Col8a1Q00780 Gm44520-201ENSMUST00000205447 802 ntBASIC3.38□□□□□ -1.87
Col8a1Q00780 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC3.38□□□□□ -1.87
Col8a1Q00780 Gm3829-201ENSMUST00000222362 619 ntBASIC3.38□□□□□ -1.87
Col8a1Q00780 AC151902.2-201ENSMUST00000226419 301 ntBASIC3.38□□□□□ -1.87
Col8a1Q00780 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Col8a1Q00780 Gm6462-201ENSMUST00000081488 304 ntBASIC3.38□□□□□ -1.87
Col8a1Q00780 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Col8a1Q00780 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Col8a1Q00780 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC3.37□□□□□ -1.87
Col8a1Q00780 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Col8a1Q00780 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Col8a1Q00780 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Col8a1Q00780 Gm23226-201ENSMUST00000116927 103 ntBASIC3.37□□□□□ -1.87
Col8a1Q00780 Gm14894-201ENSMUST00000117170 270 ntBASIC3.37□□□□□ -1.87
Col8a1Q00780 Gm12617-201ENSMUST00000121268 381 ntBASIC3.37□□□□□ -1.87
Col8a1Q00780 Gm13210-201ENSMUST00000121483 273 ntBASIC3.37□□□□□ -1.87
Col8a1Q00780 Gm15065-201ENSMUST00000121699 273 ntBASIC3.37□□□□□ -1.87
Col8a1Q00780 Gm24839-201ENSMUST00000122602 107 ntBASIC3.37□□□□□ -1.87
Col8a1Q00780 Gm23584-201ENSMUST00000157655 129 ntBASIC3.37□□□□□ -1.87
Col8a1Q00780 Gm23585-201ENSMUST00000157656 102 ntBASIC3.37□□□□□ -1.87
Col8a1Q00780 Gm22654-201ENSMUST00000157874 105 ntBASIC3.37□□□□□ -1.87
Col8a1Q00780 Gm7241-201ENSMUST00000159853 357 ntBASIC3.37□□□□□ -1.87
Col8a1Q00780 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC3.37□□□□□ -1.87
Col8a1Q00780 Gm23922-201ENSMUST00000178792 79 ntBASIC3.37□□□□□ -1.87
Col8a1Q00780 Gm24657-201ENSMUST00000180085 79 ntBASIC3.37□□□□□ -1.87
Col8a1Q00780 Gm22996-201ENSMUST00000180236 79 ntBASIC3.37□□□□□ -1.87
Col8a1Q00780 Mir6938-201ENSMUST00000184173 63 ntBASIC3.37□□□□□ -1.87
Col8a1Q00780 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.37□□□□□ -1.87
Col8a1Q00780 Gm37449-201ENSMUST00000193016 270 ntBASIC3.37□□□□□ -1.87
Col8a1Q00780 Gm18658-201ENSMUST00000195558 270 ntBASIC3.37□□□□□ -1.87
Col8a1Q00780 Gm42647-201ENSMUST00000195939 459 ntBASIC3.37□□□□□ -1.87
Col8a1Q00780 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.37□□□□□ -1.87
Col8a1Q00780 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC3.37□□□□□ -1.87
Col8a1Q00780 Mir1a-2-201ENSMUST00000198520 72 ntBASIC3.37□□□□□ -1.87
Col8a1Q00780 Gm43991-201ENSMUST00000203751 274 ntBASIC3.37□□□□□ -1.87
Col8a1Q00780 Gm45080-201ENSMUST00000206648 283 ntBASIC3.37□□□□□ -1.87
Col8a1Q00780 Gm19366-201ENSMUST00000206996 156 ntBASIC3.37□□□□□ -1.87
Col8a1Q00780 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC3.37□□□□□ -1.87
Col8a1Q00780 Gm6303-201ENSMUST00000210123 471 ntBASIC3.37□□□□□ -1.87
Col8a1Q00780 AC154374.1-201ENSMUST00000215351 351 ntBASIC3.37□□□□□ -1.87
Col8a1Q00780 AC123533.1-201ENSMUST00000227782 446 ntBASIC3.37□□□□□ -1.87
Col8a1Q00780 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Col8a1Q00780 Gm26449-201ENSMUST00000082452 104 ntBASIC3.37□□□□□ -1.87
Col8a1Q00780 Gm25411-201ENSMUST00000083760 151 ntBASIC3.37□□□□□ -1.87
Col8a1Q00780 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC3.37□□□□□ -1.87
Col8a1Q00780 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
Col8a1Q00780 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Col8a1Q00780 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
Col8a1Q00780 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
Col8a1Q00780 Gm45804-201ENSMUST00000212137 3435 ntBASIC3.37□□□□□ -1.87
Col8a1Q00780 Gm43320-201ENSMUST00000196047 2916 ntBASIC3.37□□□□□ -1.87
Col8a1Q00780 Gm37006-201ENSMUST00000195253 2674 ntBASIC3.37□□□□□ -1.87
Col8a1Q00780 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
Col8a1Q00780 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Col8a1Q00780 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Col8a1Q00780 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Col8a1Q00780 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Col8a1Q00780 Mir105-201ENSMUST00000104655 80 ntBASIC3.36□□□□□ -1.87
Col8a1Q00780 Gm14537-201ENSMUST00000117464 599 ntBASIC3.36□□□□□ -1.87
Col8a1Q00780 Gm13504-201ENSMUST00000117490 316 ntBASIC3.36□□□□□ -1.87
Col8a1Q00780 Gm12550-201ENSMUST00000118478 329 ntBASIC3.36□□□□□ -1.87
Col8a1Q00780 Gm13687-201ENSMUST00000119857 282 ntBASIC3.36□□□□□ -1.87
Col8a1Q00780 Gm7618-201ENSMUST00000121643 171 ntBASIC3.36□□□□□ -1.87
Col8a1Q00780 Gm24627-201ENSMUST00000122764 138 ntBASIC3.36□□□□□ -1.87
Col8a1Q00780 Gm23466-201ENSMUST00000157133 106 ntBASIC3.36□□□□□ -1.87
Col8a1Q00780 Gm23642-201ENSMUST00000157858 258 ntBASIC3.36□□□□□ -1.87
Col8a1Q00780 Gm25716-201ENSMUST00000158628 104 ntBASIC3.36□□□□□ -1.87
Col8a1Q00780 Gm24885-201ENSMUST00000158783 270 ntBASIC3.36□□□□□ -1.87
Col8a1Q00780 Gm22011-201ENSMUST00000158790 123 ntBASIC3.36□□□□□ -1.87
Col8a1Q00780 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Col8a1Q00780 Gm24304-201ENSMUST00000177635 107 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 93.9 ms