Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm36866-201ENSMUST00000193343 657 ntBASIC1.4□□□□□ -2.19
Cux1P53564 Gm36047-201ENSMUST00000193659 657 ntBASIC1.4□□□□□ -2.19
Cux1P53564 Gm20857-201ENSMUST00000194766 657 ntBASIC1.4□□□□□ -2.19
Cux1P53564 Gm20858-201ENSMUST00000195459 657 ntBASIC1.4□□□□□ -2.19
Cux1P53564 Gm30638-201ENSMUST00000195570 656 ntBASIC1.4□□□□□ -2.19
Cux1P53564 Gm19147-201ENSMUST00000199622 652 ntBASIC1.4□□□□□ -2.19
Cux1P53564 AC164567.2-201ENSMUST00000219363 445 ntBASIC1.4□□□□□ -2.19
Cux1P53564 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.4□□□□□ -2.19
Cux1P53564 AC125523.1-201ENSMUST00000228018 934 ntBASIC1.4□□□□□ -2.19
Cux1P53564 Gm12640-201ENSMUST00000120097 310 ntBASIC1.39□□□□□ -2.19
Cux1P53564 Gm14898-201ENSMUST00000120202 645 ntBASIC1.39□□□□□ -2.19
Cux1P53564 Mup-ps1-201ENSMUST00000120720 544 ntBASIC1.39□□□□□ -2.19
Cux1P53564 Gm9071-201ENSMUST00000165915 474 ntBASIC1.39□□□□□ -2.19
Cux1P53564 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.39□□□□□ -2.19
Cux1P53564 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.39□□□□□ -2.19
Cux1P53564 Mup-ps8-201ENSMUST00000178663 545 ntBASIC1.39□□□□□ -2.19
Cux1P53564 Mup-ps6-201ENSMUST00000179564 545 ntBASIC1.39□□□□□ -2.19
Cux1P53564 Gm27522-201ENSMUST00000183949 230 ntBASIC1.39□□□□□ -2.19
Cux1P53564 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
Cux1P53564 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
Cux1P53564 Gm44794-201ENSMUST00000206550 411 ntBASIC1.39□□□□□ -2.19
Cux1P53564 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC1.39□□□□□ -2.19
Cux1P53564 Gm19233-201ENSMUST00000219772 936 ntBASIC1.39□□□□□ -2.19
Cux1P53564 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Cux1P53564 Olfr1160-201ENSMUST00000099839 960 ntBASIC1.39□□□□□ -2.19
Cux1P53564 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Cux1P53564 Gm7648-201ENSMUST00000173036 1658 ntBASIC1.38□□□□□ -2.19
Cux1P53564 Gm25495-201ENSMUST00000104431 131 ntBASIC1.38□□□□□ -2.19
Cux1P53564 Gm13731-201ENSMUST00000117332 196 ntBASIC1.38□□□□□ -2.19
Cux1P53564 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC1.38□□□□□ -2.19
Cux1P53564 Gm26278-201ENSMUST00000157098 132 ntBASIC1.38□□□□□ -2.19
Cux1P53564 Gm22340-201ENSMUST00000157717 114 ntBASIC1.38□□□□□ -2.19
Cux1P53564 Mir3112-201ENSMUST00000175431 82 ntBASIC1.38□□□□□ -2.19
Cux1P53564 Gm25247-201ENSMUST00000175475 90 ntBASIC1.38□□□□□ -2.19
Cux1P53564 Mir7241-201ENSMUST00000184532 64 ntBASIC1.38□□□□□ -2.19
Cux1P53564 Gm25079-201ENSMUST00000082529 203 ntBASIC1.38□□□□□ -2.19
Cux1P53564 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Cux1P53564 Gm15110-201ENSMUST00000117545 881 ntBASIC1.37□□□□□ -2.19
Cux1P53564 Gm15112-201ENSMUST00000120152 860 ntBASIC1.37□□□□□ -2.19
Cux1P53564 Gm14800-201ENSMUST00000122084 1272 ntBASIC1.37□□□□□ -2.19
Cux1P53564 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Cux1P53564 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Cux1P53564 Gm22252-201ENSMUST00000179316 79 ntBASIC1.37□□□□□ -2.19
Cux1P53564 Gm44483-201ENSMUST00000197203 97 ntBASIC1.37□□□□□ -2.19
Cux1P53564 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC1.37□□□□□ -2.19
Cux1P53564 AL450317.1-201ENSMUST00000213941 291 ntBASIC1.37□□□□□ -2.19
Cux1P53564 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
Cux1P53564 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.36□□□□□ -2.19
Cux1P53564 Gm14558-201ENSMUST00000117458 381 ntBASIC1.36□□□□□ -2.19
Cux1P53564 Gm15126-201ENSMUST00000118631 833 ntBASIC1.36□□□□□ -2.19
Cux1P53564 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC1.36□□□□□ -2.19
Cux1P53564 Gm23933-201ENSMUST00000178405 79 ntBASIC1.36□□□□□ -2.19
Cux1P53564 Gm43708-201ENSMUST00000198857 961 ntBASIC1.36□□□□□ -2.19
Cux1P53564 Gm44404-201ENSMUST00000203979 636 ntBASIC1.36□□□□□ -2.19
Cux1P53564 CT010455.1-201ENSMUST00000218579 413 ntBASIC1.36□□□□□ -2.19
Cux1P53564 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC1.36□□□□□ -2.19
Cux1P53564 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
Cux1P53564 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC1.36□□□□□ -2.19
Cux1P53564 Snord116l9-201ENSMUST00000101891 94 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Gm26504-201ENSMUST00000102033 94 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Gm26502-201ENSMUST00000177732 94 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Snord116l13-201ENSMUST00000177737 94 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Gm25350-201ENSMUST00000177849 94 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Snord116l15-201ENSMUST00000177940 94 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Gm23446-201ENSMUST00000177977 94 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Snord116l4-201ENSMUST00000177982 94 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Gm26201-201ENSMUST00000178047 94 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Gm24711-201ENSMUST00000178062 94 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Gm24609-201ENSMUST00000178166 94 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Gm23265-201ENSMUST00000178321 94 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Gm22812-201ENSMUST00000178329 94 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Snord116l3-201ENSMUST00000178370 94 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Gm26246-201ENSMUST00000178388 94 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Gm25155-201ENSMUST00000178450 94 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Gm24760-201ENSMUST00000178530 94 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Gm22285-201ENSMUST00000178576 94 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Gm22417-201ENSMUST00000178656 94 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Snord116l2-201ENSMUST00000178675 94 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Gm26270-201ENSMUST00000178690 94 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Snord116l16-201ENSMUST00000178777 94 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Gm23313-201ENSMUST00000178931 94 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Snord116l17-201ENSMUST00000178936 94 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Gm23089-201ENSMUST00000178947 94 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Snord116l10-201ENSMUST00000179053 94 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Gm24153-201ENSMUST00000179280 94 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Gm25597-201ENSMUST00000179388 94 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Snord116l1-201ENSMUST00000179518 94 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Gm25816-201ENSMUST00000179764 94 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Snord116l8-201ENSMUST00000179889 94 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Snord116l7-201ENSMUST00000179895 94 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Snord116l5-201ENSMUST00000179927 94 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Snord116l6-201ENSMUST00000179955 94 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Gm26188-201ENSMUST00000179963 94 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Gm26433-201ENSMUST00000180227 94 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Snord116l11-201ENSMUST00000180312 94 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Gm22128-201ENSMUST00000180346 94 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Gm29641-201ENSMUST00000188955 259 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC1.35□□□□□ -2.19
Cux1P53564 CT572985.2-201ENSMUST00000220496 211 ntBASIC1.35□□□□□ -2.19
Cux1P53564 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC1.35□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 115.1 ms