Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm22245-201ENSMUST00000082479 103 ntBASIC4.5□□□□□ -1.69
Rfx1P48377 Gm22169-201ENSMUST00000083229 107 ntBASIC4.5□□□□□ -1.69
Rfx1P48377 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Rfx1P48377 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Rfx1P48377 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Rfx1P48377 Gm37645-201ENSMUST00000194285 3556 ntBASIC4.49□□□□□ -1.69
Rfx1P48377 Gm23841-201ENSMUST00000116951 114 ntBASIC4.49□□□□□ -1.69
Rfx1P48377 Gm12934-201ENSMUST00000119221 343 ntBASIC4.49□□□□□ -1.69
Rfx1P48377 Gm14770-201ENSMUST00000122197 312 ntBASIC4.49□□□□□ -1.69
Rfx1P48377 Mir5136-201ENSMUST00000175573 76 ntBASIC4.49□□□□□ -1.69
Rfx1P48377 Gm22367-201ENSMUST00000178930 132 ntBASIC4.49□□□□□ -1.69
Rfx1P48377 Gm7656-201ENSMUST00000182468 1004 ntBASIC4.49□□□□□ -1.69
Rfx1P48377 Mir6960-201ENSMUST00000183449 61 ntBASIC4.49□□□□□ -1.69
Rfx1P48377 Gm27699-201ENSMUST00000183553 180 ntBASIC4.49□□□□□ -1.69
Rfx1P48377 AC118006.1-201ENSMUST00000224211 501 ntBASIC4.49□□□□□ -1.69
Rfx1P48377 Mir34b-201ENSMUST00000083558 84 ntBASIC4.49□□□□□ -1.69
Rfx1P48377 Gm22868-201ENSMUST00000083955 164 ntBASIC4.49□□□□□ -1.69
Rfx1P48377 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Rfx1P48377 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
Rfx1P48377 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
Rfx1P48377 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Rfx1P48377 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
Rfx1P48377 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Rfx1P48377 Gm23705-201ENSMUST00000104370 130 ntBASIC4.48□□□□□ -1.69
Rfx1P48377 Gm12417-201ENSMUST00000119153 403 ntBASIC4.48□□□□□ -1.69
Rfx1P48377 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Rfx1P48377 Gm25913-201ENSMUST00000157617 135 ntBASIC4.48□□□□□ -1.69
Rfx1P48377 Gm26187-201ENSMUST00000157693 101 ntBASIC4.48□□□□□ -1.69
Rfx1P48377 Gm22766-201ENSMUST00000158372 99 ntBASIC4.48□□□□□ -1.69
Rfx1P48377 Gm20693-201ENSMUST00000177431 211 ntBASIC4.48□□□□□ -1.69
Rfx1P48377 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Rfx1P48377 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC4.48□□□□□ -1.69
Rfx1P48377 Mir6907-201ENSMUST00000183764 71 ntBASIC4.48□□□□□ -1.69
Rfx1P48377 Gm27760-201ENSMUST00000185048 114 ntBASIC4.48□□□□□ -1.69
Rfx1P48377 Gm43680-201ENSMUST00000199466 340 ntBASIC4.48□□□□□ -1.69
Rfx1P48377 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC4.48□□□□□ -1.69
Rfx1P48377 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC4.48□□□□□ -1.69
Rfx1P48377 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Rfx1P48377 Gm25856-201ENSMUST00000082786 75 ntBASIC4.48□□□□□ -1.69
Rfx1P48377 Gm43486-201ENSMUST00000196431 4339 ntBASIC4.48□□□□□ -1.69
Rfx1P48377 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Rfx1P48377 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Rfx1P48377 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Rfx1P48377 Gm42909-201ENSMUST00000196982 3619 ntBASIC4.47□□□□□ -1.69
Rfx1P48377 Snord66-201ENSMUST00000104051 75 ntBASIC4.47□□□□□ -1.69
Rfx1P48377 Gm24867-201ENSMUST00000104161 107 ntBASIC4.47□□□□□ -1.69
Rfx1P48377 Gm25104-201ENSMUST00000122476 163 ntBASIC4.47□□□□□ -1.69
Rfx1P48377 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC4.47□□□□□ -1.69
Rfx1P48377 Gm23545-201ENSMUST00000158205 104 ntBASIC4.47□□□□□ -1.69
Rfx1P48377 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Rfx1P48377 Gm27414-201ENSMUST00000185033 381 ntBASIC4.47□□□□□ -1.69
Rfx1P48377 Gm28825-201ENSMUST00000186233 238 ntBASIC4.47□□□□□ -1.69
Rfx1P48377 Ighv12-2-201ENSMUST00000191949 362 ntBASIC4.47□□□□□ -1.69
Rfx1P48377 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC4.47□□□□□ -1.69
Rfx1P48377 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC4.47□□□□□ -1.69
Rfx1P48377 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Rfx1P48377 Gm23727-201ENSMUST00000083352 164 ntBASIC4.47□□□□□ -1.69
Rfx1P48377 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Rfx1P48377 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Rfx1P48377 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Rfx1P48377 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Rfx1P48377 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
Rfx1P48377 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Rfx1P48377 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Rfx1P48377 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
Rfx1P48377 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
Rfx1P48377 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
Rfx1P48377 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC4.46□□□□□ -1.7
Rfx1P48377 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Rfx1P48377 Gm42481-201ENSMUST00000196822 2178 ntBASIC4.46□□□□□ -1.7
Rfx1P48377 Gm45662-201ENSMUST00000210054 2098 ntBASIC4.46□□□□□ -1.7
Rfx1P48377 Gm22493-201ENSMUST00000104494 132 ntBASIC4.46□□□□□ -1.7
Rfx1P48377 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC4.46□□□□□ -1.7
Rfx1P48377 Gm24930-201ENSMUST00000158315 83 ntBASIC4.46□□□□□ -1.7
Rfx1P48377 Gm26362-201ENSMUST00000158865 315 ntBASIC4.46□□□□□ -1.7
Rfx1P48377 Gm30280-201ENSMUST00000192214 262 ntBASIC4.46□□□□□ -1.7
Rfx1P48377 Gm30341-201ENSMUST00000194363 289 ntBASIC4.46□□□□□ -1.7
Rfx1P48377 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC4.46□□□□□ -1.7
Rfx1P48377 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC4.46□□□□□ -1.7
Rfx1P48377 CT010506.3-201ENSMUST00000223699 410 ntBASIC4.46□□□□□ -1.7
Rfx1P48377 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Rfx1P48377 Gm25800-201ENSMUST00000082636 134 ntBASIC4.46□□□□□ -1.7
Rfx1P48377 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Rfx1P48377 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
Rfx1P48377 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Rfx1P48377 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Rfx1P48377 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC4.45□□□□□ -1.7
Rfx1P48377 Mir872-201ENSMUST00000104728 81 ntBASIC4.45□□□□□ -1.7
Rfx1P48377 Gm15162-201ENSMUST00000119325 283 ntBASIC4.45□□□□□ -1.7
Rfx1P48377 Gm14782-201ENSMUST00000120151 195 ntBASIC4.45□□□□□ -1.7
Rfx1P48377 Gm9003-201ENSMUST00000121810 482 ntBASIC4.45□□□□□ -1.7
Rfx1P48377 Gm22320-201ENSMUST00000157149 312 ntBASIC4.45□□□□□ -1.7
Rfx1P48377 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC4.45□□□□□ -1.7
Rfx1P48377 Gm29657-201ENSMUST00000189807 342 ntBASIC4.45□□□□□ -1.7
Rfx1P48377 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC4.45□□□□□ -1.7
Rfx1P48377 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC4.45□□□□□ -1.7
Rfx1P48377 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC4.45□□□□□ -1.7
Rfx1P48377 AC107757.3-201ENSMUST00000226312 535 ntBASIC4.45□□□□□ -1.7
Rfx1P48377 Snord22-201ENSMUST00000083153 126 ntBASIC4.45□□□□□ -1.7
Rfx1P48377 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 98.7 ms