Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC0.41□□□□□ -2.34
HttP42859 Gm42976-201ENSMUST00000200313 222 ntBASIC0.41□□□□□ -2.34
HttP42859 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC0.41□□□□□ -2.34
HttP42859 Gm37399-201ENSMUST00000195224 416 ntBASIC0.41□□□□□ -2.34
HttP42859 Gm42958-201ENSMUST00000197595 318 ntBASIC0.41□□□□□ -2.34
HttP42859 AC124542.1-201ENSMUST00000205588 908 ntBASIC0.41□□□□□ -2.34
HttP42859 Gm19855-201ENSMUST00000210145 249 ntBASIC0.41□□□□□ -2.34
HttP42859 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC0.41□□□□□ -2.34
HttP42859 Mir7091-201ENSMUST00000184075 79 ntBASIC0.4□□□□□ -2.34
HttP42859 Mir7241-201ENSMUST00000184532 64 ntBASIC0.4□□□□□ -2.34
HttP42859 Gm18113-201ENSMUST00000220630 303 ntBASIC0.4□□□□□ -2.34
HttP42859 Gm10092-201ENSMUST00000077110 180 ntBASIC0.4□□□□□ -2.34
HttP42859 Gm24385-201ENSMUST00000122694 350 ntBASIC0.4□□□□□ -2.35
HttP42859 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC0.4□□□□□ -2.35
HttP42859 Trbv6-201ENSMUST00000193743 276 ntBASIC0.4□□□□□ -2.35
HttP42859 Snora16a-202ENSMUST00000196061 137 ntBASIC0.4□□□□□ -2.35
HttP42859 Gm44465-201ENSMUST00000199536 114 ntBASIC0.4□□□□□ -2.35
HttP42859 Gm7726-201ENSMUST00000206241 231 ntBASIC0.4□□□□□ -2.35
HttP42859 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
HttP42859 Gm15213-201ENSMUST00000122098 216 ntBASIC0.4□□□□□ -2.35
HttP42859 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC0.4□□□□□ -2.35
HttP42859 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC0.4□□□□□ -2.35
HttP42859 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
HttP42859 Gm24256-201ENSMUST00000083696 84 ntBASIC0.4□□□□□ -2.35
HttP42859 Gm29389-201ENSMUST00000191562 352 ntBASIC0.39□□□□□ -2.35
HttP42859 Gm36638-201ENSMUST00000193295 400 ntBASIC0.39□□□□□ -2.35
HttP42859 Gm38113-201ENSMUST00000193704 201 ntBASIC0.39□□□□□ -2.35
HttP42859 AC133076.1-201ENSMUST00000228074 484 ntBASIC0.39□□□□□ -2.35
HttP42859 Gm25856-201ENSMUST00000082786 75 ntBASIC0.39□□□□□ -2.35
HttP42859 Mir301-201ENSMUST00000083655 86 ntBASIC0.39□□□□□ -2.35
HttP42859 Mir466f-1-201ENSMUST00000104779 94 ntBASIC0.39□□□□□ -2.35
HttP42859 Gm24777-201ENSMUST00000157644 107 ntBASIC0.39□□□□□ -2.35
HttP42859 Gm25413-201ENSMUST00000158544 312 ntBASIC0.39□□□□□ -2.35
HttP42859 Gm38323-201ENSMUST00000192450 210 ntBASIC0.39□□□□□ -2.35
HttP42859 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC0.38□□□□□ -2.35
HttP42859 Gm12155-201ENSMUST00000121267 160 ntBASIC0.38□□□□□ -2.35
HttP42859 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC0.38□□□□□ -2.35
HttP42859 Gm43541-201ENSMUST00000197208 581 ntBASIC0.38□□□□□ -2.35
HttP42859 Mir6964-201ENSMUST00000200252 59 ntBASIC0.38□□□□□ -2.35
HttP42859 Gm26328-201ENSMUST00000082821 107 ntBASIC0.38□□□□□ -2.35
HttP42859 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC0.38□□□□□ -2.35
HttP42859 Gm14069-201ENSMUST00000120815 229 ntBASIC0.38□□□□□ -2.35
HttP42859 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC0.38□□□□□ -2.35
HttP42859 Gm22315-201ENSMUST00000158010 143 ntBASIC0.38□□□□□ -2.35
HttP42859 Gm27717-201ENSMUST00000183933 151 ntBASIC0.38□□□□□ -2.35
HttP42859 Gm44301-201ENSMUST00000200362 143 ntBASIC0.38□□□□□ -2.35
HttP42859 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
HttP42859 Gm22658-201ENSMUST00000104196 155 ntBASIC0.38□□□□□ -2.35
HttP42859 Gm13460-201ENSMUST00000121274 353 ntBASIC0.38□□□□□ -2.35
HttP42859 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
HttP42859 CT010480.1-201ENSMUST00000223612 363 ntBASIC0.38□□□□□ -2.35
HttP42859 CT030645.1-201ENSMUST00000224020 231 ntBASIC0.38□□□□□ -2.35
HttP42859 AC164164.1-201ENSMUST00000223245 2340 ntBASIC0.37□□□□□ -2.35
HttP42859 Gm16147-201ENSMUST00000162143 373 ntBASIC0.37□□□□□ -2.35
HttP42859 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC0.37□□□□□ -2.35
HttP42859 Gm18356-201ENSMUST00000185677 623 ntBASIC0.37□□□□□ -2.35
HttP42859 Gm26186-201ENSMUST00000157689 125 ntBASIC0.37□□□□□ -2.35
HttP42859 Scarna8-201ENSMUST00000158333 131 ntBASIC0.37□□□□□ -2.35
HttP42859 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC0.37□□□□□ -2.35
HttP42859 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC0.37□□□□□ -2.35
HttP42859 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC0.37□□□□□ -2.35
HttP42859 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC0.37□□□□□ -2.35
HttP42859 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC0.37□□□□□ -2.35
HttP42859 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC0.37□□□□□ -2.35
HttP42859 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC0.37□□□□□ -2.35
HttP42859 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC0.37□□□□□ -2.35
HttP42859 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC0.37□□□□□ -2.35
HttP42859 Gm24903-201ENSMUST00000158131 126 ntBASIC0.36□□□□□ -2.35
HttP42859 Gm22766-201ENSMUST00000158372 99 ntBASIC0.36□□□□□ -2.35
HttP42859 Gm26701-201ENSMUST00000181571 234 ntBASIC0.36□□□□□ -2.35
HttP42859 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC0.36□□□□□ -2.35
HttP42859 Gm7654-201ENSMUST00000186738 683 ntBASIC0.36□□□□□ -2.35
HttP42859 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC0.36□□□□□ -2.35
HttP42859 Gm36966-201ENSMUST00000192217 413 ntBASIC0.36□□□□□ -2.35
HttP42859 Gm37979-201ENSMUST00000193065 712 ntBASIC0.36□□□□□ -2.35
HttP42859 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC0.36□□□□□ -2.35
HttP42859 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC0.36□□□□□ -2.35
HttP42859 CT010449.1-201ENSMUST00000220624 153 ntBASIC0.36□□□□□ -2.35
HttP42859 Gm14979-201ENSMUST00000121561 1035 ntBASIC0.36□□□□□ -2.35
HttP42859 n-R5s73-201ENSMUST00000122508 107 ntBASIC0.36□□□□□ -2.35
HttP42859 Gm24412-201ENSMUST00000083426 109 ntBASIC0.36□□□□□ -2.35
HttP42859 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
HttP42859 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC0.36□□□□□ -2.35
HttP42859 Gm24197-201ENSMUST00000175085 109 ntBASIC0.35□□□□□ -2.35
HttP42859 Gm27610-201ENSMUST00000184026 74 ntBASIC0.35□□□□□ -2.35
HttP42859 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC0.35□□□□□ -2.35
HttP42859 AC158388.1-201ENSMUST00000225441 256 ntBASIC0.35□□□□□ -2.35
HttP42859 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
HttP42859 Gm24018-201ENSMUST00000083232 107 ntBASIC0.35□□□□□ -2.35
HttP42859 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
HttP42859 Gm14884-201ENSMUST00000120456 196 ntBASIC0.35□□□□□ -2.35
HttP42859 Gm16458-201ENSMUST00000121428 502 ntBASIC0.35□□□□□ -2.35
HttP42859 Gm13602-201ENSMUST00000122405 493 ntBASIC0.35□□□□□ -2.35
HttP42859 Gm14364-201ENSMUST00000129209 267 ntBASIC0.35□□□□□ -2.35
HttP42859 Gm45614-201ENSMUST00000209994 721 ntBASIC0.35□□□□□ -2.35
HttP42859 Mir1967-201ENSMUST00000157789 82 ntBASIC0.35□□□□□ -2.35
HttP42859 Gm42807-201ENSMUST00000200141 329 ntBASIC0.35□□□□□ -2.35
HttP42859 Gm26439-201ENSMUST00000082592 106 ntBASIC0.35□□□□□ -2.35
HttP42859 Mir214-201ENSMUST00000083582 110 ntBASIC0.35□□□□□ -2.35
HttP42859 Gm2830-201ENSMUST00000140330 385 ntBASIC0.34□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms