Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm5937-201ENSMUST00000119715 643 ntBASIC2.06□□□□□ -2.08
Cxcl12P40224 Gm14785-201ENSMUST00000120185 539 ntBASIC2.06□□□□□ -2.08
Cxcl12P40224 Gm11358-201ENSMUST00000122310 373 ntBASIC2.06□□□□□ -2.08
Cxcl12P40224 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC2.06□□□□□ -2.08
Cxcl12P40224 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Cxcl12P40224 Gm24439-201ENSMUST00000157894 117 ntBASIC2.06□□□□□ -2.08
Cxcl12P40224 Gm22076-201ENSMUST00000158601 84 ntBASIC2.06□□□□□ -2.08
Cxcl12P40224 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC2.06□□□□□ -2.08
Cxcl12P40224 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Cxcl12P40224 Gm24464-201ENSMUST00000179697 107 ntBASIC2.06□□□□□ -2.08
Cxcl12P40224 Mir7016-201ENSMUST00000184308 72 ntBASIC2.06□□□□□ -2.08
Cxcl12P40224 Gm29216-201ENSMUST00000187117 492 ntBASIC2.06□□□□□ -2.08
Cxcl12P40224 Gm28299-201ENSMUST00000189908 339 ntBASIC2.06□□□□□ -2.08
Cxcl12P40224 Gm29516-201ENSMUST00000190402 468 ntBASIC2.06□□□□□ -2.08
Cxcl12P40224 Gm37727-201ENSMUST00000191637 819 ntBASIC2.06□□□□□ -2.08
Cxcl12P40224 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.06□□□□□ -2.08
Cxcl12P40224 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC2.06□□□□□ -2.08
Cxcl12P40224 AC153957.1-201ENSMUST00000215235 229 ntBASIC2.06□□□□□ -2.08
Cxcl12P40224 AC154506.1-201ENSMUST00000225178 621 ntBASIC2.06□□□□□ -2.08
Cxcl12P40224 AC112935.1-201ENSMUST00000227603 250 ntBASIC2.06□□□□□ -2.08
Cxcl12P40224 AC117588.2-201ENSMUST00000228340 311 ntBASIC2.06□□□□□ -2.08
Cxcl12P40224 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC2.06□□□□□ -2.08
Cxcl12P40224 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.06□□□□□ -2.08
Cxcl12P40224 AC134917.1-201ENSMUST00000220517 1449 ntBASIC2.06□□□□□ -2.08
Cxcl12P40224 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Cxcl12P40224 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
Cxcl12P40224 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Cxcl12P40224 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Cxcl12P40224 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Cxcl12P40224 Gm25876-201ENSMUST00000104329 119 ntBASIC2.05□□□□□ -2.08
Cxcl12P40224 Gm14588-201ENSMUST00000119895 172 ntBASIC2.05□□□□□ -2.08
Cxcl12P40224 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC2.05□□□□□ -2.08
Cxcl12P40224 Gm26864-201ENSMUST00000181346 156 ntBASIC2.05□□□□□ -2.08
Cxcl12P40224 Mir7678-201ENSMUST00000185076 71 ntBASIC2.05□□□□□ -2.08
Cxcl12P40224 Gm43406-201ENSMUST00000200356 334 ntBASIC2.05□□□□□ -2.08
Cxcl12P40224 Gm29848-201ENSMUST00000203107 295 ntBASIC2.05□□□□□ -2.08
Cxcl12P40224 Gm43955-201ENSMUST00000204332 142 ntBASIC2.05□□□□□ -2.08
Cxcl12P40224 Gm45445-201ENSMUST00000209586 232 ntBASIC2.05□□□□□ -2.08
Cxcl12P40224 CT010506.2-201ENSMUST00000225618 183 ntBASIC2.05□□□□□ -2.08
Cxcl12P40224 Gm24313-201ENSMUST00000082561 133 ntBASIC2.05□□□□□ -2.08
Cxcl12P40224 Gm24948-201ENSMUST00000082866 207 ntBASIC2.05□□□□□ -2.08
Cxcl12P40224 Mir208a-201ENSMUST00000083498 83 ntBASIC2.05□□□□□ -2.08
Cxcl12P40224 Mir137-201ENSMUST00000083635 73 ntBASIC2.05□□□□□ -2.08
Cxcl12P40224 Gm2869-201ENSMUST00000124359 2621 ntBASIC2.05□□□□□ -2.08
Cxcl12P40224 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC2.04□□□□□ -2.08
Cxcl12P40224 Gm26080-201ENSMUST00000104069 131 ntBASIC2.04□□□□□ -2.08
Cxcl12P40224 Igkv13-87-201ENSMUST00000114214 286 ntBASIC2.04□□□□□ -2.08
Cxcl12P40224 Gm14602-201ENSMUST00000118625 340 ntBASIC2.04□□□□□ -2.08
Cxcl12P40224 Gm14887-201ENSMUST00000119522 663 ntBASIC2.04□□□□□ -2.08
Cxcl12P40224 Gm14049-201ENSMUST00000121009 636 ntBASIC2.04□□□□□ -2.08
Cxcl12P40224 AA413626-201ENSMUST00000121125 494 ntBASIC2.04□□□□□ -2.08
Cxcl12P40224 Gm25220-201ENSMUST00000157546 95 ntBASIC2.04□□□□□ -2.08
Cxcl12P40224 Gm22611-201ENSMUST00000158288 150 ntBASIC2.04□□□□□ -2.08
Cxcl12P40224 Snord116l14-201ENSMUST00000179875 94 ntBASIC2.04□□□□□ -2.08
Cxcl12P40224 Gm37029-201ENSMUST00000195773 239 ntBASIC2.04□□□□□ -2.08
Cxcl12P40224 Gm43513-201ENSMUST00000199779 1076 ntBASIC2.04□□□□□ -2.08
Cxcl12P40224 Gm44472-201ENSMUST00000204922 943 ntBASIC2.04□□□□□ -2.08
Cxcl12P40224 Gm45071-201ENSMUST00000205353 571 ntBASIC2.04□□□□□ -2.08
Cxcl12P40224 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC2.04□□□□□ -2.08
Cxcl12P40224 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Cxcl12P40224 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.04□□□□□ -2.08
Cxcl12P40224 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC2.04□□□□□ -2.08
Cxcl12P40224 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.04□□□□□ -2.08
Cxcl12P40224 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Cxcl12P40224 BC022960-201ENSMUST00000119987 1815 ntBASIC2.03□□□□□ -2.08
Cxcl12P40224 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Cxcl12P40224 Gm12386-201ENSMUST00000117380 688 ntBASIC2.03□□□□□ -2.08
Cxcl12P40224 Gm15175-201ENSMUST00000117629 132 ntBASIC2.03□□□□□ -2.08
Cxcl12P40224 Gm13085-201ENSMUST00000118356 171 ntBASIC2.03□□□□□ -2.08
Cxcl12P40224 Gm11991-201ENSMUST00000119652 1074 ntBASIC2.03□□□□□ -2.08
Cxcl12P40224 Gm23212-201ENSMUST00000122718 60 ntBASIC2.03□□□□□ -2.08
Cxcl12P40224 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC2.03□□□□□ -2.08
Cxcl12P40224 Gm23342-201ENSMUST00000158958 115 ntBASIC2.03□□□□□ -2.08
Cxcl12P40224 Gm11395-201ENSMUST00000181011 499 ntBASIC2.03□□□□□ -2.08
Cxcl12P40224 Mir7039-201ENSMUST00000183852 85 ntBASIC2.03□□□□□ -2.08
Cxcl12P40224 Gm27245-201ENSMUST00000184385 376 ntBASIC2.03□□□□□ -2.08
Cxcl12P40224 Gm27753-201ENSMUST00000184742 203 ntBASIC2.03□□□□□ -2.08
Cxcl12P40224 Gm29167-201ENSMUST00000190024 377 ntBASIC2.03□□□□□ -2.08
Cxcl12P40224 Gm38238-201ENSMUST00000194334 346 ntBASIC2.03□□□□□ -2.08
Cxcl12P40224 Gm43626-201ENSMUST00000198575 162 ntBASIC2.03□□□□□ -2.08
Cxcl12P40224 Gm18635-201ENSMUST00000199020 1060 ntBASIC2.03□□□□□ -2.08
Cxcl12P40224 AC157654.1-201ENSMUST00000224130 820 ntBASIC2.03□□□□□ -2.08
Cxcl12P40224 AC241593.1-201ENSMUST00000224768 397 ntBASIC2.03□□□□□ -2.08
Cxcl12P40224 Gm25124-201ENSMUST00000083345 164 ntBASIC2.03□□□□□ -2.08
Cxcl12P40224 Mir423-201ENSMUST00000083584 109 ntBASIC2.03□□□□□ -2.08
Cxcl12P40224 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Cxcl12P40224 Gm22496-201ENSMUST00000104493 88 ntBASIC2.02□□□□□ -2.09
Cxcl12P40224 Gm15714-201ENSMUST00000117168 250 ntBASIC2.02□□□□□ -2.09
Cxcl12P40224 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC2.02□□□□□ -2.09
Cxcl12P40224 Gm14765-201ENSMUST00000121954 326 ntBASIC2.02□□□□□ -2.09
Cxcl12P40224 n-R5s150-201ENSMUST00000122705 108 ntBASIC2.02□□□□□ -2.09
Cxcl12P40224 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Cxcl12P40224 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC2.02□□□□□ -2.09
Cxcl12P40224 Gm25175-201ENSMUST00000178712 79 ntBASIC2.02□□□□□ -2.09
Cxcl12P40224 Gm22633-201ENSMUST00000179834 107 ntBASIC2.02□□□□□ -2.09
Cxcl12P40224 Gm27582-201ENSMUST00000184084 126 ntBASIC2.02□□□□□ -2.09
Cxcl12P40224 Gm21673-201ENSMUST00000186640 436 ntBASIC2.02□□□□□ -2.09
Cxcl12P40224 Gm21135-201ENSMUST00000189023 436 ntBASIC2.02□□□□□ -2.09
Cxcl12P40224 Gm28169-201ENSMUST00000190342 345 ntBASIC2.02□□□□□ -2.09
Cxcl12P40224 Trbv18-201ENSMUST00000194256 294 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms