Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.85□□□□□ -1.95
Traf1P39428 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC2.85□□□□□ -1.95
Traf1P39428 Gm45240-201ENSMUST00000211437 674 ntBASIC2.85□□□□□ -1.95
Traf1P39428 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Traf1P39428 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
Traf1P39428 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Traf1P39428 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
Traf1P39428 Gm23422-201ENSMUST00000102000 107 ntBASIC2.84□□□□□ -1.95
Traf1P39428 n-R5s202-201ENSMUST00000104517 114 ntBASIC2.84□□□□□ -1.95
Traf1P39428 Gm12697-201ENSMUST00000118008 667 ntBASIC2.84□□□□□ -1.95
Traf1P39428 Gm13602-201ENSMUST00000122405 493 ntBASIC2.84□□□□□ -1.95
Traf1P39428 Gm25052-201ENSMUST00000122661 158 ntBASIC2.84□□□□□ -1.95
Traf1P39428 Gm22166-201ENSMUST00000178419 121 ntBASIC2.84□□□□□ -1.95
Traf1P39428 Gm23288-201ENSMUST00000179213 121 ntBASIC2.84□□□□□ -1.95
Traf1P39428 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Traf1P39428 Gm23862-201ENSMUST00000180342 94 ntBASIC2.84□□□□□ -1.95
Traf1P39428 Mir7068-201ENSMUST00000183439 74 ntBASIC2.84□□□□□ -1.95
Traf1P39428 Gm18185-201ENSMUST00000186725 667 ntBASIC2.84□□□□□ -1.95
Traf1P39428 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC2.84□□□□□ -1.95
Traf1P39428 Gm43669-201ENSMUST00000198229 436 ntBASIC2.84□□□□□ -1.95
Traf1P39428 AC069561.2-201ENSMUST00000217596 420 ntBASIC2.84□□□□□ -1.95
Traf1P39428 AC159203.2-201ENSMUST00000221326 193 ntBASIC2.84□□□□□ -1.95
Traf1P39428 Gm35558-203ENSMUST00000222264 204 ntBASIC2.84□□□□□ -1.95
Traf1P39428 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Traf1P39428 Gm23454-201ENSMUST00000083332 133 ntBASIC2.84□□□□□ -1.95
Traf1P39428 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.96
Traf1P39428 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
Traf1P39428 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Traf1P39428 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Traf1P39428 Gm12443-201ENSMUST00000122308 323 ntBASIC2.83□□□□□ -1.96
Traf1P39428 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Traf1P39428 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC2.83□□□□□ -1.96
Traf1P39428 Gm23600-201ENSMUST00000157260 71 ntBASIC2.83□□□□□ -1.96
Traf1P39428 Gm22668-201ENSMUST00000158716 260 ntBASIC2.83□□□□□ -1.96
Traf1P39428 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Traf1P39428 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
Traf1P39428 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.83□□□□□ -1.96
Traf1P39428 Gm9022-202ENSMUST00000183285 483 ntBASIC2.83□□□□□ -1.96
Traf1P39428 Mir7j-201ENSMUST00000184427 122 ntBASIC2.83□□□□□ -1.96
Traf1P39428 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Traf1P39428 Mir6925-201ENSMUST00000197857 70 ntBASIC2.83□□□□□ -1.96
Traf1P39428 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC2.83□□□□□ -1.96
Traf1P39428 Gm7065-201ENSMUST00000222150 474 ntBASIC2.83□□□□□ -1.96
Traf1P39428 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Traf1P39428 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.83□□□□□ -1.96
Traf1P39428 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.82□□□□□ -1.96
Traf1P39428 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Traf1P39428 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Traf1P39428 Gm2830-201ENSMUST00000140330 385 ntBASIC2.82□□□□□ -1.96
Traf1P39428 Gm26105-201ENSMUST00000157253 190 ntBASIC2.82□□□□□ -1.96
Traf1P39428 Gm23752-201ENSMUST00000157584 115 ntBASIC2.82□□□□□ -1.96
Traf1P39428 Gm26393-201ENSMUST00000157625 129 ntBASIC2.82□□□□□ -1.96
Traf1P39428 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Traf1P39428 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC2.82□□□□□ -1.96
Traf1P39428 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC2.82□□□□□ -1.96
Traf1P39428 Mir6370-201ENSMUST00000183510 120 ntBASIC2.82□□□□□ -1.96
Traf1P39428 Gm27369-201ENSMUST00000185182 71 ntBASIC2.82□□□□□ -1.96
Traf1P39428 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.82□□□□□ -1.96
Traf1P39428 Ighv12-1-201ENSMUST00000195542 329 ntBASIC2.82□□□□□ -1.96
Traf1P39428 Gm9236-201ENSMUST00000196892 587 ntBASIC2.82□□□□□ -1.96
Traf1P39428 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.82□□□□□ -1.96
Traf1P39428 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.82□□□□□ -1.96
Traf1P39428 Gm5374-201ENSMUST00000222868 657 ntBASIC2.82□□□□□ -1.96
Traf1P39428 AC135292.1-201ENSMUST00000227665 204 ntBASIC2.82□□□□□ -1.96
Traf1P39428 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Traf1P39428 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC2.82□□□□□ -1.96
Traf1P39428 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Traf1P39428 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC2.82□□□□□ -1.96
Traf1P39428 Gm25507-201ENSMUST00000116981 144 ntBASIC2.81□□□□□ -1.96
Traf1P39428 Gm11410-201ENSMUST00000120053 1143 ntBASIC2.81□□□□□ -1.96
Traf1P39428 Gm7916-201ENSMUST00000120325 456 ntBASIC2.81□□□□□ -1.96
Traf1P39428 Gm13720-201ENSMUST00000120741 196 ntBASIC2.81□□□□□ -1.96
Traf1P39428 Gm22382-201ENSMUST00000158185 130 ntBASIC2.81□□□□□ -1.96
Traf1P39428 Gm24056-201ENSMUST00000158617 146 ntBASIC2.81□□□□□ -1.96
Traf1P39428 Gm43582-201ENSMUST00000196149 343 ntBASIC2.81□□□□□ -1.96
Traf1P39428 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Traf1P39428 Gm43529-201ENSMUST00000199178 412 ntBASIC2.81□□□□□ -1.96
Traf1P39428 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC2.81□□□□□ -1.96
Traf1P39428 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC2.81□□□□□ -1.96
Traf1P39428 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC2.81□□□□□ -1.96
Traf1P39428 Gm24698-201ENSMUST00000083883 130 ntBASIC2.81□□□□□ -1.96
Traf1P39428 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Traf1P39428 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Traf1P39428 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.8□□□□□ -1.96
Traf1P39428 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
Traf1P39428 Gm26342-201ENSMUST00000104557 129 ntBASIC2.8□□□□□ -1.96
Traf1P39428 Gm25529-201ENSMUST00000104850 92 ntBASIC2.8□□□□□ -1.96
Traf1P39428 Gm14588-201ENSMUST00000119895 172 ntBASIC2.8□□□□□ -1.96
Traf1P39428 Gm12006-201ENSMUST00000120786 403 ntBASIC2.8□□□□□ -1.96
Traf1P39428 Gm9225-201ENSMUST00000121921 836 ntBASIC2.8□□□□□ -1.96
Traf1P39428 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC2.8□□□□□ -1.96
Traf1P39428 Gm23713-201ENSMUST00000157353 70 ntBASIC2.8□□□□□ -1.96
Traf1P39428 Gm22615-201ENSMUST00000158102 70 ntBASIC2.8□□□□□ -1.96
Traf1P39428 Gm28838-201ENSMUST00000186338 315 ntBASIC2.8□□□□□ -1.96
Traf1P39428 Gm29635-201ENSMUST00000187221 315 ntBASIC2.8□□□□□ -1.96
Traf1P39428 Gm29026-201ENSMUST00000187787 315 ntBASIC2.8□□□□□ -1.96
Traf1P39428 Gm28797-201ENSMUST00000188543 315 ntBASIC2.8□□□□□ -1.96
Traf1P39428 Gm28855-201ENSMUST00000188680 315 ntBASIC2.8□□□□□ -1.96
Traf1P39428 Gm28705-201ENSMUST00000189548 315 ntBASIC2.8□□□□□ -1.96
Traf1P39428 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms