Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RaraP11416 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
RaraP11416 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RaraP11416 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC4.25□□□□□ -1.73
RaraP11416 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
RaraP11416 Gm23319-201ENSMUST00000104467 131 ntBASIC4.25□□□□□ -1.73
RaraP11416 Gm12550-201ENSMUST00000118478 329 ntBASIC4.25□□□□□ -1.73
RaraP11416 Gm12071-201ENSMUST00000121968 469 ntBASIC4.25□□□□□ -1.73
RaraP11416 Gm25805-201ENSMUST00000122788 108 ntBASIC4.25□□□□□ -1.73
RaraP11416 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC4.25□□□□□ -1.73
RaraP11416 Gm22217-201ENSMUST00000157556 313 ntBASIC4.25□□□□□ -1.73
RaraP11416 Gm22215-201ENSMUST00000157558 96 ntBASIC4.25□□□□□ -1.73
RaraP11416 Gm29610-201ENSMUST00000187749 453 ntBASIC4.25□□□□□ -1.73
RaraP11416 Gm28848-201ENSMUST00000189984 168 ntBASIC4.25□□□□□ -1.73
RaraP11416 Gm37670-201ENSMUST00000193622 229 ntBASIC4.25□□□□□ -1.73
RaraP11416 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RaraP11416 Gm6240-201ENSMUST00000208014 473 ntBASIC4.25□□□□□ -1.73
RaraP11416 Gm40810-201ENSMUST00000219149 253 ntBASIC4.25□□□□□ -1.73
RaraP11416 AC154213.2-201ENSMUST00000227138 187 ntBASIC4.25□□□□□ -1.73
RaraP11416 Gm26166-201ENSMUST00000083788 107 ntBASIC4.25□□□□□ -1.73
RaraP11416 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC4.25□□□□□ -1.73
RaraP11416 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
RaraP11416 Gm38073-201ENSMUST00000195141 3665 ntBASIC4.25□□□□□ -1.73
RaraP11416 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC4.25□□□□□ -1.73
RaraP11416 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
RaraP11416 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RaraP11416 Gm4746-201ENSMUST00000120395 2406 ntBASIC4.24□□□□□ -1.73
RaraP11416 Gm22493-201ENSMUST00000104494 132 ntBASIC4.24□□□□□ -1.73
RaraP11416 Mdga2-203ENSMUST00000113942 423 ntBASIC4.24□□□□□ -1.73
RaraP11416 Gm5396-201ENSMUST00000121222 532 ntBASIC4.24□□□□□ -1.73
RaraP11416 Gm23789-201ENSMUST00000122536 301 ntBASIC4.24□□□□□ -1.73
RaraP11416 Gm23781-201ENSMUST00000157940 308 ntBASIC4.24□□□□□ -1.73
RaraP11416 Gm22767-201ENSMUST00000158365 165 ntBASIC4.24□□□□□ -1.73
RaraP11416 Gm2862-201ENSMUST00000161524 328 ntBASIC4.24□□□□□ -1.73
RaraP11416 Gm17166-201ENSMUST00000172006 431 ntBASIC4.24□□□□□ -1.73
RaraP11416 Gm27828-201ENSMUST00000184108 119 ntBASIC4.24□□□□□ -1.73
RaraP11416 Gm28304-201ENSMUST00000185977 312 ntBASIC4.24□□□□□ -1.73
RaraP11416 Gm29256-201ENSMUST00000189094 312 ntBASIC4.24□□□□□ -1.73
RaraP11416 Gm28484-201ENSMUST00000190606 312 ntBASIC4.24□□□□□ -1.73
RaraP11416 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC4.24□□□□□ -1.73
RaraP11416 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
RaraP11416 AC156560.3-201ENSMUST00000222978 3841 ntBASIC4.24□□□□□ -1.73
RaraP11416 AC154358.1-201ENSMUST00000224871 218 ntBASIC4.24□□□□□ -1.73
RaraP11416 Mir370-201ENSMUST00000083499 79 ntBASIC4.24□□□□□ -1.73
RaraP11416 Gm23039-201ENSMUST00000083870 161 ntBASIC4.24□□□□□ -1.73
RaraP11416 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
RaraP11416 Gm3623-201ENSMUST00000173643 2747 ntBASIC4.24□□□□□ -1.73
RaraP11416 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
RaraP11416 Gm44434-201ENSMUST00000203918 3745 ntBASIC4.24□□□□□ -1.73
RaraP11416 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RaraP11416 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
RaraP11416 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
RaraP11416 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
RaraP11416 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
RaraP11416 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
RaraP11416 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
RaraP11416 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
RaraP11416 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
RaraP11416 Mir872-201ENSMUST00000104728 81 ntBASIC4.23□□□□□ -1.73
RaraP11416 Gm13432-201ENSMUST00000118861 241 ntBASIC4.23□□□□□ -1.73
RaraP11416 Gm8244-201ENSMUST00000121254 264 ntBASIC4.23□□□□□ -1.73
RaraP11416 Gm25177-201ENSMUST00000122634 117 ntBASIC4.23□□□□□ -1.73
RaraP11416 Gm22384-201ENSMUST00000158187 104 ntBASIC4.23□□□□□ -1.73
RaraP11416 Gm24726-201ENSMUST00000158232 121 ntBASIC4.23□□□□□ -1.73
RaraP11416 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RaraP11416 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RaraP11416 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
RaraP11416 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC4.23□□□□□ -1.73
RaraP11416 Mir6715-201ENSMUST00000184990 57 ntBASIC4.23□□□□□ -1.73
RaraP11416 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC4.23□□□□□ -1.73
RaraP11416 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC4.23□□□□□ -1.73
RaraP11416 Mir1a-2-201ENSMUST00000198520 72 ntBASIC4.23□□□□□ -1.73
RaraP11416 AC150901.1-201ENSMUST00000208407 145 ntBASIC4.23□□□□□ -1.73
RaraP11416 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC4.23□□□□□ -1.73
RaraP11416 AC165106.2-201ENSMUST00000226749 97 ntBASIC4.23□□□□□ -1.73
RaraP11416 AC108416.2-201ENSMUST00000226792 367 ntBASIC4.23□□□□□ -1.73
RaraP11416 AC098718.2-201ENSMUST00000226822 285 ntBASIC4.23□□□□□ -1.73
RaraP11416 Gm22868-201ENSMUST00000083955 164 ntBASIC4.23□□□□□ -1.73
RaraP11416 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
RaraP11416 Gm10813-201ENSMUST00000099936 90 ntBASIC4.23□□□□□ -1.73
RaraP11416 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
RaraP11416 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RaraP11416 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
RaraP11416 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RaraP11416 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC4.23□□□□□ -1.73
RaraP11416 Gm37176-201ENSMUST00000193300 4051 ntBASIC4.22□□□□□ -1.73
RaraP11416 Gm18609-201ENSMUST00000203370 3601 ntBASIC4.22□□□□□ -1.73
RaraP11416 Gm26387-201ENSMUST00000104238 132 ntBASIC4.22□□□□□ -1.73
RaraP11416 Gm13831-201ENSMUST00000118764 302 ntBASIC4.22□□□□□ -1.73
RaraP11416 Gm26476-201ENSMUST00000122618 313 ntBASIC4.22□□□□□ -1.73
RaraP11416 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC4.22□□□□□ -1.73
RaraP11416 Gm22097-201ENSMUST00000157929 278 ntBASIC4.22□□□□□ -1.73
RaraP11416 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC4.22□□□□□ -1.73
RaraP11416 Gm1833-201ENSMUST00000191608 682 ntBASIC4.22□□□□□ -1.73
RaraP11416 Gm19901-201ENSMUST00000192191 495 ntBASIC4.22□□□□□ -1.73
RaraP11416 Gm9377-201ENSMUST00000207227 623 ntBASIC4.22□□□□□ -1.73
RaraP11416 Gm45553-201ENSMUST00000209929 507 ntBASIC4.22□□□□□ -1.73
RaraP11416 Gm18441-201ENSMUST00000223539 617 ntBASIC4.22□□□□□ -1.73
RaraP11416 AL645546.1-201ENSMUST00000225001 189 ntBASIC4.22□□□□□ -1.73
RaraP11416 Gm22620-201ENSMUST00000082700 133 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms