Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm14215-201ENSMUST00000120578 221 ntBASIC2.41□□□□□ -2.02
Lire1P11260 Gm14551-201ENSMUST00000120802 256 ntBASIC2.41□□□□□ -2.02
Lire1P11260 Gm13862-201ENSMUST00000121220 197 ntBASIC2.41□□□□□ -2.02
Lire1P11260 Gm14638-201ENSMUST00000121338 216 ntBASIC2.41□□□□□ -2.02
Lire1P11260 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC2.41□□□□□ -2.02
Lire1P11260 Gm16218-201ENSMUST00000155424 388 ntBASIC2.41□□□□□ -2.02
Lire1P11260 Gm24681-201ENSMUST00000158760 107 ntBASIC2.41□□□□□ -2.02
Lire1P11260 Gm15914-201ENSMUST00000161922 309 ntBASIC2.41□□□□□ -2.02
Lire1P11260 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC2.41□□□□□ -2.02
Lire1P11260 Mir5118-201ENSMUST00000175551 67 ntBASIC2.41□□□□□ -2.02
Lire1P11260 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC2.41□□□□□ -2.02
Lire1P11260 Gm29231-201ENSMUST00000179850 319 ntBASIC2.41□□□□□ -2.02
Lire1P11260 Gm19694-201ENSMUST00000192364 505 ntBASIC2.41□□□□□ -2.02
Lire1P11260 Gm43722-201ENSMUST00000196054 124 ntBASIC2.41□□□□□ -2.02
Lire1P11260 Gm42509-201ENSMUST00000197390 781 ntBASIC2.41□□□□□ -2.02
Lire1P11260 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC2.41□□□□□ -2.02
Lire1P11260 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC2.41□□□□□ -2.02
Lire1P11260 Gm43529-201ENSMUST00000199178 412 ntBASIC2.41□□□□□ -2.02
Lire1P11260 Gm6796-201ENSMUST00000211919 243 ntBASIC2.41□□□□□ -2.02
Lire1P11260 AC153529.1-201ENSMUST00000217818 370 ntBASIC2.41□□□□□ -2.02
Lire1P11260 Gm29809-201ENSMUST00000218423 493 ntBASIC2.41□□□□□ -2.02
Lire1P11260 AC167192.4-201ENSMUST00000224087 993 ntBASIC2.41□□□□□ -2.02
Lire1P11260 AC158521.1-201ENSMUST00000225295 660 ntBASIC2.41□□□□□ -2.02
Lire1P11260 Gm25796-201ENSMUST00000082645 163 ntBASIC2.41□□□□□ -2.02
Lire1P11260 Gm22622-201ENSMUST00000082870 129 ntBASIC2.41□□□□□ -2.02
Lire1P11260 Gm25404-201ENSMUST00000082970 107 ntBASIC2.41□□□□□ -2.02
Lire1P11260 Gm23503-201ENSMUST00000083903 107 ntBASIC2.41□□□□□ -2.02
Lire1P11260 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC2.41□□□□□ -2.02
Lire1P11260 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Lire1P11260 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
Lire1P11260 Gm381-201ENSMUST00000117443 2037 ntBASIC2.41□□□□□ -2.02
Lire1P11260 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.4□□□□□ -2.02
Lire1P11260 Gm26377-201ENSMUST00000102184 108 ntBASIC2.4□□□□□ -2.03
Lire1P11260 Gm14007-201ENSMUST00000118288 210 ntBASIC2.4□□□□□ -2.03
Lire1P11260 Gm13059-201ENSMUST00000119881 398 ntBASIC2.4□□□□□ -2.03
Lire1P11260 Gm15719-201ENSMUST00000120619 635 ntBASIC2.4□□□□□ -2.03
Lire1P11260 Gm22597-201ENSMUST00000157602 80 ntBASIC2.4□□□□□ -2.03
Lire1P11260 Gm25863-201ENSMUST00000158249 329 ntBASIC2.4□□□□□ -2.03
Lire1P11260 Gm25670-201ENSMUST00000178423 107 ntBASIC2.4□□□□□ -2.03
Lire1P11260 Gm26239-201ENSMUST00000178842 107 ntBASIC2.4□□□□□ -2.03
Lire1P11260 Snord116l12-201ENSMUST00000179816 94 ntBASIC2.4□□□□□ -2.03
Lire1P11260 Gm24267-201ENSMUST00000179841 107 ntBASIC2.4□□□□□ -2.03
Lire1P11260 Gm29604-201ENSMUST00000187176 163 ntBASIC2.4□□□□□ -2.03
Lire1P11260 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Lire1P11260 Snord43-201ENSMUST00000199549 108 ntBASIC2.4□□□□□ -2.03
Lire1P11260 Gm45013-201ENSMUST00000206883 178 ntBASIC2.4□□□□□ -2.03
Lire1P11260 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC2.4□□□□□ -2.03
Lire1P11260 Gm24292-201ENSMUST00000082888 107 ntBASIC2.4□□□□□ -2.03
Lire1P11260 Mir127-201ENSMUST00000093568 70 ntBASIC2.4□□□□□ -2.03
Lire1P11260 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.4□□□□□ -2.03
Lire1P11260 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Lire1P11260 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.4□□□□□ -2.03
Lire1P11260 Gm42536-201ENSMUST00000197562 1613 ntBASIC2.39□□□□□ -2.03
Lire1P11260 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Lire1P11260 Gm26247-201ENSMUST00000116702 91 ntBASIC2.39□□□□□ -2.03
Lire1P11260 Gm14887-201ENSMUST00000119522 663 ntBASIC2.39□□□□□ -2.03
Lire1P11260 Gm23429-201ENSMUST00000122486 149 ntBASIC2.39□□□□□ -2.03
Lire1P11260 Gm25707-201ENSMUST00000175120 96 ntBASIC2.39□□□□□ -2.03
Lire1P11260 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Lire1P11260 Gm23269-201ENSMUST00000178701 107 ntBASIC2.39□□□□□ -2.03
Lire1P11260 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
Lire1P11260 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Lire1P11260 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC2.39□□□□□ -2.03
Lire1P11260 Gm37807-201ENSMUST00000194310 190 ntBASIC2.39□□□□□ -2.03
Lire1P11260 AC069561.2-201ENSMUST00000217596 420 ntBASIC2.39□□□□□ -2.03
Lire1P11260 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.39□□□□□ -2.03
Lire1P11260 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC2.39□□□□□ -2.03
Lire1P11260 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.39□□□□□ -2.03
Lire1P11260 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Lire1P11260 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Lire1P11260 Gm26458-201ENSMUST00000082832 128 ntBASIC2.39□□□□□ -2.03
Lire1P11260 Mir29c-201ENSMUST00000083614 88 ntBASIC2.39□□□□□ -2.03
Lire1P11260 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC2.39□□□□□ -2.03
Lire1P11260 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Lire1P11260 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
Lire1P11260 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Lire1P11260 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
Lire1P11260 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Lire1P11260 Gm26342-201ENSMUST00000104557 129 ntBASIC2.38□□□□□ -2.03
Lire1P11260 Mir466k-201ENSMUST00000116774 122 ntBASIC2.38□□□□□ -2.03
Lire1P11260 Gm13885-201ENSMUST00000117569 187 ntBASIC2.38□□□□□ -2.03
Lire1P11260 Gm15067-201ENSMUST00000119534 156 ntBASIC2.38□□□□□ -2.03
Lire1P11260 Gm23981-201ENSMUST00000157136 106 ntBASIC2.38□□□□□ -2.03
Lire1P11260 Gm25454-201ENSMUST00000157947 315 ntBASIC2.38□□□□□ -2.03
Lire1P11260 Gm24053-201ENSMUST00000158620 105 ntBASIC2.38□□□□□ -2.03
Lire1P11260 Gm24082-201ENSMUST00000175175 83 ntBASIC2.38□□□□□ -2.03
Lire1P11260 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Lire1P11260 Gm37709-201ENSMUST00000195074 600 ntBASIC2.38□□□□□ -2.03
Lire1P11260 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC2.38□□□□□ -2.03
Lire1P11260 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC2.38□□□□□ -2.03
Lire1P11260 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC2.38□□□□□ -2.03
Lire1P11260 AC147240.1-201ENSMUST00000218767 431 ntBASIC2.38□□□□□ -2.03
Lire1P11260 AC130222.1-201ENSMUST00000221198 256 ntBASIC2.38□□□□□ -2.03
Lire1P11260 Gm17890-201ENSMUST00000221419 757 ntBASIC2.38□□□□□ -2.03
Lire1P11260 CT485612.4-201ENSMUST00000223405 250 ntBASIC2.38□□□□□ -2.03
Lire1P11260 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Lire1P11260 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Lire1P11260 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Lire1P11260 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
Lire1P11260 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms