Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Mir16-2-201ENSMUST00000083672 95 ntBASIC2.1□□□□□ -2.07
Chmp6P0C0A3 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Chmp6P0C0A3 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Chmp6P0C0A3 Gm24430-201ENSMUST00000104077 104 ntBASIC2.09□□□□□ -2.07
Chmp6P0C0A3 Gm14670-201ENSMUST00000117327 337 ntBASIC2.09□□□□□ -2.07
Chmp6P0C0A3 Gm14558-201ENSMUST00000117458 381 ntBASIC2.09□□□□□ -2.07
Chmp6P0C0A3 Gm14417-201ENSMUST00000120036 1074 ntBASIC2.09□□□□□ -2.07
Chmp6P0C0A3 Gm23206-201ENSMUST00000122720 184 ntBASIC2.09□□□□□ -2.07
Chmp6P0C0A3 Gm25624-201ENSMUST00000157222 275 ntBASIC2.09□□□□□ -2.07
Chmp6P0C0A3 Gm8114-201ENSMUST00000172225 484 ntBASIC2.09□□□□□ -2.07
Chmp6P0C0A3 Gm25996-201ENSMUST00000175393 117 ntBASIC2.09□□□□□ -2.07
Chmp6P0C0A3 Gm27979-201ENSMUST00000185126 56 ntBASIC2.09□□□□□ -2.07
Chmp6P0C0A3 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC2.09□□□□□ -2.07
Chmp6P0C0A3 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC2.09□□□□□ -2.07
Chmp6P0C0A3 Gm28466-201ENSMUST00000190678 659 ntBASIC2.09□□□□□ -2.07
Chmp6P0C0A3 Gm38146-201ENSMUST00000194121 1293 ntBASIC2.09□□□□□ -2.07
Chmp6P0C0A3 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
Chmp6P0C0A3 Gm44181-201ENSMUST00000203106 483 ntBASIC2.09□□□□□ -2.07
Chmp6P0C0A3 Gm10297-201ENSMUST00000207136 651 ntBASIC2.09□□□□□ -2.07
Chmp6P0C0A3 Olfr1285-201ENSMUST00000208523 903 ntBASIC2.09□□□□□ -2.07
Chmp6P0C0A3 Gm45382-201ENSMUST00000210607 151 ntBASIC2.09□□□□□ -2.07
Chmp6P0C0A3 Gm6109-201ENSMUST00000223297 348 ntBASIC2.09□□□□□ -2.07
Chmp6P0C0A3 Gm23503-201ENSMUST00000083903 107 ntBASIC2.09□□□□□ -2.07
Chmp6P0C0A3 Gm44821-201ENSMUST00000208212 2002 ntBASIC2.08□□□□□ -2.08
Chmp6P0C0A3 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Chmp6P0C0A3 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
Chmp6P0C0A3 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC2.08□□□□□ -2.08
Chmp6P0C0A3 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC2.08□□□□□ -2.08
Chmp6P0C0A3 Gm13356-201ENSMUST00000121678 335 ntBASIC2.08□□□□□ -2.08
Chmp6P0C0A3 Gm22236-201ENSMUST00000157093 106 ntBASIC2.08□□□□□ -2.08
Chmp6P0C0A3 Gm22037-201ENSMUST00000157280 296 ntBASIC2.08□□□□□ -2.08
Chmp6P0C0A3 Gm28560-201ENSMUST00000186091 315 ntBASIC2.08□□□□□ -2.08
Chmp6P0C0A3 Gm28334-201ENSMUST00000186653 315 ntBASIC2.08□□□□□ -2.08
Chmp6P0C0A3 Gm28495-201ENSMUST00000188452 315 ntBASIC2.08□□□□□ -2.08
Chmp6P0C0A3 Gm28232-201ENSMUST00000188683 315 ntBASIC2.08□□□□□ -2.08
Chmp6P0C0A3 Gm28481-201ENSMUST00000189231 315 ntBASIC2.08□□□□□ -2.08
Chmp6P0C0A3 Gm29059-201ENSMUST00000191534 315 ntBASIC2.08□□□□□ -2.08
Chmp6P0C0A3 Gm37765-201ENSMUST00000192395 315 ntBASIC2.08□□□□□ -2.08
Chmp6P0C0A3 Gm37237-201ENSMUST00000192893 315 ntBASIC2.08□□□□□ -2.08
Chmp6P0C0A3 Gm37757-201ENSMUST00000193072 210 ntBASIC2.08□□□□□ -2.08
Chmp6P0C0A3 Gm37550-201ENSMUST00000193230 463 ntBASIC2.08□□□□□ -2.08
Chmp6P0C0A3 Gm36968-201ENSMUST00000193737 315 ntBASIC2.08□□□□□ -2.08
Chmp6P0C0A3 Gm38290-201ENSMUST00000195238 315 ntBASIC2.08□□□□□ -2.08
Chmp6P0C0A3 Gm44794-201ENSMUST00000206550 411 ntBASIC2.08□□□□□ -2.08
Chmp6P0C0A3 Gm18703-201ENSMUST00000215318 333 ntBASIC2.08□□□□□ -2.08
Chmp6P0C0A3 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.08□□□□□ -2.08
Chmp6P0C0A3 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Chmp6P0C0A3 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.08□□□□□ -2.08
Chmp6P0C0A3 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Chmp6P0C0A3 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC2.07□□□□□ -2.08
Chmp6P0C0A3 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Chmp6P0C0A3 Gm14932-201ENSMUST00000117112 453 ntBASIC2.07□□□□□ -2.08
Chmp6P0C0A3 Gm12550-201ENSMUST00000118478 329 ntBASIC2.07□□□□□ -2.08
Chmp6P0C0A3 Gm6444-201ENSMUST00000119611 458 ntBASIC2.07□□□□□ -2.08
Chmp6P0C0A3 Gm16328-201ENSMUST00000126985 196 ntBASIC2.07□□□□□ -2.08
Chmp6P0C0A3 Gm22727-201ENSMUST00000158090 116 ntBASIC2.07□□□□□ -2.08
Chmp6P0C0A3 Gm23068-201ENSMUST00000158239 293 ntBASIC2.07□□□□□ -2.08
Chmp6P0C0A3 Gm25368-201ENSMUST00000158847 131 ntBASIC2.07□□□□□ -2.08
Chmp6P0C0A3 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC2.07□□□□□ -2.08
Chmp6P0C0A3 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC2.07□□□□□ -2.08
Chmp6P0C0A3 Gm27991-201ENSMUST00000184804 137 ntBASIC2.07□□□□□ -2.08
Chmp6P0C0A3 Gm28745-201ENSMUST00000190069 305 ntBASIC2.07□□□□□ -2.08
Chmp6P0C0A3 Gm37946-201ENSMUST00000192064 347 ntBASIC2.07□□□□□ -2.08
Chmp6P0C0A3 Gm37438-201ENSMUST00000192813 393 ntBASIC2.07□□□□□ -2.08
Chmp6P0C0A3 Gm18964-201ENSMUST00000193013 563 ntBASIC2.07□□□□□ -2.08
Chmp6P0C0A3 Trbv24-201ENSMUST00000194614 347 ntBASIC2.07□□□□□ -2.08
Chmp6P0C0A3 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC2.07□□□□□ -2.08
Chmp6P0C0A3 Gm45240-201ENSMUST00000211437 674 ntBASIC2.07□□□□□ -2.08
Chmp6P0C0A3 AL929265.1-201ENSMUST00000213427 125 ntBASIC2.07□□□□□ -2.08
Chmp6P0C0A3 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC2.07□□□□□ -2.08
Chmp6P0C0A3 AC101677.1-201ENSMUST00000218590 158 ntBASIC2.07□□□□□ -2.08
Chmp6P0C0A3 AC130222.1-201ENSMUST00000221198 256 ntBASIC2.07□□□□□ -2.08
Chmp6P0C0A3 AC135292.1-201ENSMUST00000227665 204 ntBASIC2.07□□□□□ -2.08
Chmp6P0C0A3 Gm24921-201ENSMUST00000083024 107 ntBASIC2.07□□□□□ -2.08
Chmp6P0C0A3 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Chmp6P0C0A3 Gm14943-201ENSMUST00000118056 546 ntBASIC2.06□□□□□ -2.08
Chmp6P0C0A3 Gm14835-201ENSMUST00000119039 315 ntBASIC2.06□□□□□ -2.08
Chmp6P0C0A3 Gm15719-201ENSMUST00000120619 635 ntBASIC2.06□□□□□ -2.08
Chmp6P0C0A3 Gm11849-201ENSMUST00000121293 261 ntBASIC2.06□□□□□ -2.08
Chmp6P0C0A3 Gm22535-201ENSMUST00000158174 119 ntBASIC2.06□□□□□ -2.08
Chmp6P0C0A3 Gm22891-201ENSMUST00000158641 164 ntBASIC2.06□□□□□ -2.08
Chmp6P0C0A3 Zfp950-206ENSMUST00000178819 171 ntBASIC2.06□□□□□ -2.08
Chmp6P0C0A3 Gm27028-201ENSMUST00000182303 399 ntBASIC2.06□□□□□ -2.08
Chmp6P0C0A3 Mir7050-201ENSMUST00000184636 60 ntBASIC2.06□□□□□ -2.08
Chmp6P0C0A3 Mir7226-201ENSMUST00000184953 60 ntBASIC2.06□□□□□ -2.08
Chmp6P0C0A3 Mir6376-201ENSMUST00000185149 131 ntBASIC2.06□□□□□ -2.08
Chmp6P0C0A3 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC2.06□□□□□ -2.08
Chmp6P0C0A3 Gm21673-201ENSMUST00000186640 436 ntBASIC2.06□□□□□ -2.08
Chmp6P0C0A3 Gm21135-201ENSMUST00000189023 436 ntBASIC2.06□□□□□ -2.08
Chmp6P0C0A3 Gm29848-201ENSMUST00000203107 295 ntBASIC2.06□□□□□ -2.08
Chmp6P0C0A3 Gm7039-201ENSMUST00000205138 346 ntBASIC2.06□□□□□ -2.08
Chmp6P0C0A3 Gm18991-201ENSMUST00000209225 746 ntBASIC2.06□□□□□ -2.08
Chmp6P0C0A3 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC2.06□□□□□ -2.08
Chmp6P0C0A3 AC138667.2-201ENSMUST00000224880 598 ntBASIC2.06□□□□□ -2.08
Chmp6P0C0A3 AC112935.1-201ENSMUST00000227603 250 ntBASIC2.06□□□□□ -2.08
Chmp6P0C0A3 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Chmp6P0C0A3 Gm26446-201ENSMUST00000082455 103 ntBASIC2.06□□□□□ -2.08
Chmp6P0C0A3 Gm25402-201ENSMUST00000082966 131 ntBASIC2.06□□□□□ -2.08
Chmp6P0C0A3 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.06□□□□□ -2.08
Chmp6P0C0A3 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms