Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Col3a1P08121 Gm23864-201ENSMUST00000177607 107 ntBASIC3.03□□□□□ -1.92
Col3a1P08121 Gm22307-201ENSMUST00000180019 107 ntBASIC3.03□□□□□ -1.92
Col3a1P08121 Mir6386-201ENSMUST00000183558 104 ntBASIC3.03□□□□□ -1.92
Col3a1P08121 Gm28283-201ENSMUST00000185509 178 ntBASIC3.03□□□□□ -1.92
Col3a1P08121 Gm44011-201ENSMUST00000203336 394 ntBASIC3.03□□□□□ -1.92
Col3a1P08121 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Col3a1P08121 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC3.03□□□□□ -1.92
Col3a1P08121 Gm7675-201ENSMUST00000208828 686 ntBASIC3.03□□□□□ -1.92
Col3a1P08121 Gm18346-201ENSMUST00000216782 325 ntBASIC3.03□□□□□ -1.92
Col3a1P08121 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Col3a1P08121 Gm10222-201ENSMUST00000088336 294 ntBASIC3.03□□□□□ -1.92
Col3a1P08121 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
Col3a1P08121 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
Col3a1P08121 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Col3a1P08121 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
Col3a1P08121 Gm8744-201ENSMUST00000204475 3581 ntBASIC3.03□□□□□ -1.92
Col3a1P08121 Gm23551-201ENSMUST00000116852 121 ntBASIC3.03□□□□□ -1.93
Col3a1P08121 Gm24210-201ENSMUST00000158263 133 ntBASIC3.03□□□□□ -1.93
Col3a1P08121 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
Col3a1P08121 Mir5624-201ENSMUST00000176635 61 ntBASIC3.03□□□□□ -1.93
Col3a1P08121 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC3.03□□□□□ -1.93
Col3a1P08121 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC3.03□□□□□ -1.93
Col3a1P08121 Gm45146-201ENSMUST00000207108 221 ntBASIC3.03□□□□□ -1.93
Col3a1P08121 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC3.03□□□□□ -1.93
Col3a1P08121 Gm8249-201ENSMUST00000219225 465 ntBASIC3.03□□□□□ -1.93
Col3a1P08121 AC159621.1-201ENSMUST00000223249 163 ntBASIC3.03□□□□□ -1.93
Col3a1P08121 AC165092.3-201ENSMUST00000223602 282 ntBASIC3.03□□□□□ -1.93
Col3a1P08121 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
Col3a1P08121 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC3.03□□□□□ -1.93
Col3a1P08121 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC3.03□□□□□ -1.93
Col3a1P08121 Mir19a-201ENSMUST00000083482 82 ntBASIC3.03□□□□□ -1.93
Col3a1P08121 Rny1-201ENSMUST00000083767 112 ntBASIC3.03□□□□□ -1.93
Col3a1P08121 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Col3a1P08121 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Col3a1P08121 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.02□□□□□ -1.93
Col3a1P08121 Gm38255-201ENSMUST00000194910 2996 ntBASIC3.02□□□□□ -1.93
Col3a1P08121 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Col3a1P08121 Snord72-201ENSMUST00000104549 81 ntBASIC3.02□□□□□ -1.93
Col3a1P08121 Gm14428-201ENSMUST00000120408 822 ntBASIC3.02□□□□□ -1.93
Col3a1P08121 Gm16533-201ENSMUST00000140035 228 ntBASIC3.02□□□□□ -1.93
Col3a1P08121 Gm8292-201ENSMUST00000162574 396 ntBASIC3.02□□□□□ -1.93
Col3a1P08121 Mir3066-201ENSMUST00000175296 83 ntBASIC3.02□□□□□ -1.93
Col3a1P08121 Gm3852-201ENSMUST00000182781 264 ntBASIC3.02□□□□□ -1.93
Col3a1P08121 Gm19641-201ENSMUST00000188432 417 ntBASIC3.02□□□□□ -1.93
Col3a1P08121 Ighv12-2-201ENSMUST00000191949 362 ntBASIC3.02□□□□□ -1.93
Col3a1P08121 Gm38080-201ENSMUST00000194035 268 ntBASIC3.02□□□□□ -1.93
Col3a1P08121 Gm9377-201ENSMUST00000207227 623 ntBASIC3.02□□□□□ -1.93
Col3a1P08121 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC3.02□□□□□ -1.93
Col3a1P08121 Gm45614-201ENSMUST00000209994 721 ntBASIC3.02□□□□□ -1.93
Col3a1P08121 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
Col3a1P08121 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC3.02□□□□□ -1.93
Col3a1P08121 AC159380.1-201ENSMUST00000218096 121 ntBASIC3.02□□□□□ -1.93
Col3a1P08121 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Col3a1P08121 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Col3a1P08121 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Col3a1P08121 Gm23677-201ENSMUST00000083156 104 ntBASIC3.02□□□□□ -1.93
Col3a1P08121 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Col3a1P08121 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Col3a1P08121 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Col3a1P08121 AC125532.1-201ENSMUST00000216210 2334 ntBASIC3.01□□□□□ -1.93
Col3a1P08121 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Col3a1P08121 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Col3a1P08121 Gm24715-201ENSMUST00000102377 95 ntBASIC3.01□□□□□ -1.93
Col3a1P08121 Gm23744-201ENSMUST00000104231 149 ntBASIC3.01□□□□□ -1.93
Col3a1P08121 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Col3a1P08121 Gm14627-201ENSMUST00000118931 567 ntBASIC3.01□□□□□ -1.93
Col3a1P08121 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC3.01□□□□□ -1.93
Col3a1P08121 Gm12815-201ENSMUST00000121737 135 ntBASIC3.01□□□□□ -1.93
Col3a1P08121 Mir6382-201ENSMUST00000184055 110 ntBASIC3.01□□□□□ -1.93
Col3a1P08121 Gm37757-201ENSMUST00000193072 210 ntBASIC3.01□□□□□ -1.93
Col3a1P08121 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC3.01□□□□□ -1.93
Col3a1P08121 Gm42672-201ENSMUST00000197821 352 ntBASIC3.01□□□□□ -1.93
Col3a1P08121 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC3.01□□□□□ -1.93
Col3a1P08121 Gm45105-201ENSMUST00000207824 397 ntBASIC3.01□□□□□ -1.93
Col3a1P08121 Gm45365-201ENSMUST00000209489 256 ntBASIC3.01□□□□□ -1.93
Col3a1P08121 AC164161.1-201ENSMUST00000214076 639 ntBASIC3.01□□□□□ -1.93
Col3a1P08121 AC122225.1-201ENSMUST00000215641 369 ntBASIC3.01□□□□□ -1.93
Col3a1P08121 CT010455.1-201ENSMUST00000218579 413 ntBASIC3.01□□□□□ -1.93
Col3a1P08121 AC163033.1-201ENSMUST00000218608 157 ntBASIC3.01□□□□□ -1.93
Col3a1P08121 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC3.01□□□□□ -1.93
Col3a1P08121 AC120553.1-201ENSMUST00000227313 260 ntBASIC3.01□□□□□ -1.93
Col3a1P08121 Gm26447-201ENSMUST00000082448 129 ntBASIC3.01□□□□□ -1.93
Col3a1P08121 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC3.01□□□□□ -1.93
Col3a1P08121 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Col3a1P08121 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Col3a1P08121 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Col3a1P08121 Gm23472-201ENSMUST00000101806 191 ntBASIC3□□□□□ -1.93
Col3a1P08121 Gm23578-201ENSMUST00000103943 104 ntBASIC3□□□□□ -1.93
Col3a1P08121 Gm26015-201ENSMUST00000104402 125 ntBASIC3□□□□□ -1.93
Col3a1P08121 Gm17148-201ENSMUST00000164702 249 ntBASIC3□□□□□ -1.93
Col3a1P08121 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC3□□□□□ -1.93
Col3a1P08121 Gm24818-201ENSMUST00000175093 161 ntBASIC3□□□□□ -1.93
Col3a1P08121 Gm24497-201ENSMUST00000177868 191 ntBASIC3□□□□□ -1.93
Col3a1P08121 Gm26430-201ENSMUST00000178054 107 ntBASIC3□□□□□ -1.93
Col3a1P08121 Gm25939-201ENSMUST00000179876 191 ntBASIC3□□□□□ -1.93
Col3a1P08121 Gm6105-201ENSMUST00000200580 624 ntBASIC3□□□□□ -1.93
Col3a1P08121 Gm44083-201ENSMUST00000203114 337 ntBASIC3□□□□□ -1.93
Col3a1P08121 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC3□□□□□ -1.93
Col3a1P08121 Gm6012-201ENSMUST00000210821 730 ntBASIC3□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms