Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm23011-201ENSMUST00000104148 132 ntBASIC2□□□□□ -2.09
TnfP06804 Gm12765-201ENSMUST00000117273 615 ntBASIC2□□□□□ -2.09
TnfP06804 Gm24839-201ENSMUST00000122602 107 ntBASIC2□□□□□ -2.09
TnfP06804 Gm23956-201ENSMUST00000157211 119 ntBASIC2□□□□□ -2.09
TnfP06804 Gm25624-201ENSMUST00000157222 275 ntBASIC2□□□□□ -2.09
TnfP06804 Gm22793-201ENSMUST00000157227 330 ntBASIC2□□□□□ -2.09
TnfP06804 Gm23670-201ENSMUST00000157469 119 ntBASIC2□□□□□ -2.09
TnfP06804 Gm24394-201ENSMUST00000158141 123 ntBASIC2□□□□□ -2.09
TnfP06804 Gm24464-201ENSMUST00000179697 107 ntBASIC2□□□□□ -2.09
TnfP06804 Gm28299-201ENSMUST00000189908 339 ntBASIC2□□□□□ -2.09
TnfP06804 Gm37438-201ENSMUST00000192813 393 ntBASIC2□□□□□ -2.09
TnfP06804 Gm38146-201ENSMUST00000194121 1293 ntBASIC2□□□□□ -2.09
TnfP06804 Gm45296-201ENSMUST00000209625 205 ntBASIC2□□□□□ -2.09
TnfP06804 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC2□□□□□ -2.09
TnfP06804 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC2□□□□□ -2.09
TnfP06804 AC112935.1-201ENSMUST00000227603 250 ntBASIC2□□□□□ -2.09
TnfP06804 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC2□□□□□ -2.09
TnfP06804 Gm26166-201ENSMUST00000083788 107 ntBASIC2□□□□□ -2.09
TnfP06804 Gm23042-201ENSMUST00000083866 101 ntBASIC2□□□□□ -2.09
TnfP06804 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
TnfP06804 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2□□□□□ -2.09
TnfP06804 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
TnfP06804 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.99□□□□□ -2.09
TnfP06804 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
TnfP06804 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
TnfP06804 Gm15175-201ENSMUST00000117629 132 ntBASIC1.99□□□□□ -2.09
TnfP06804 Gm4732-201ENSMUST00000118778 473 ntBASIC1.99□□□□□ -2.09
TnfP06804 Gm14417-201ENSMUST00000120036 1074 ntBASIC1.99□□□□□ -2.09
TnfP06804 Gm13356-201ENSMUST00000121678 335 ntBASIC1.99□□□□□ -2.09
TnfP06804 Gm23111-201ENSMUST00000122652 105 ntBASIC1.99□□□□□ -2.09
TnfP06804 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC1.99□□□□□ -2.09
TnfP06804 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC1.99□□□□□ -2.09
TnfP06804 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC1.99□□□□□ -2.09
TnfP06804 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC1.99□□□□□ -2.09
TnfP06804 Gm25961-201ENSMUST00000157174 135 ntBASIC1.99□□□□□ -2.09
TnfP06804 Gm25706-201ENSMUST00000157828 247 ntBASIC1.99□□□□□ -2.09
TnfP06804 Gm24601-201ENSMUST00000157970 143 ntBASIC1.99□□□□□ -2.09
TnfP06804 Gm25335-201ENSMUST00000158043 103 ntBASIC1.99□□□□□ -2.09
TnfP06804 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC1.99□□□□□ -2.09
TnfP06804 Gm8114-201ENSMUST00000172225 484 ntBASIC1.99□□□□□ -2.09
TnfP06804 Mir6370-201ENSMUST00000183510 120 ntBASIC1.99□□□□□ -2.09
TnfP06804 Mir7678-201ENSMUST00000185076 71 ntBASIC1.99□□□□□ -2.09
TnfP06804 Mir3569-201ENSMUST00000185080 58 ntBASIC1.99□□□□□ -2.09
TnfP06804 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC1.99□□□□□ -2.09
TnfP06804 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC1.99□□□□□ -2.09
TnfP06804 Gm28560-201ENSMUST00000186091 315 ntBASIC1.99□□□□□ -2.09
TnfP06804 Gm28334-201ENSMUST00000186653 315 ntBASIC1.99□□□□□ -2.09
TnfP06804 Gm28495-201ENSMUST00000188452 315 ntBASIC1.99□□□□□ -2.09
TnfP06804 Gm28232-201ENSMUST00000188683 315 ntBASIC1.99□□□□□ -2.09
TnfP06804 Gm28481-201ENSMUST00000189231 315 ntBASIC1.99□□□□□ -2.09
TnfP06804 Gm29059-201ENSMUST00000191534 315 ntBASIC1.99□□□□□ -2.09
TnfP06804 Gm37765-201ENSMUST00000192395 315 ntBASIC1.99□□□□□ -2.09
TnfP06804 Gm37237-201ENSMUST00000192893 315 ntBASIC1.99□□□□□ -2.09
TnfP06804 Gm36968-201ENSMUST00000193737 315 ntBASIC1.99□□□□□ -2.09
TnfP06804 Gm38290-201ENSMUST00000195238 315 ntBASIC1.99□□□□□ -2.09
TnfP06804 Gm33354-201ENSMUST00000195448 906 ntBASIC1.99□□□□□ -2.09
TnfP06804 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC1.99□□□□□ -2.09
TnfP06804 AC138401.1-201ENSMUST00000221533 116 ntBASIC1.99□□□□□ -2.09
TnfP06804 Gm7065-201ENSMUST00000222150 474 ntBASIC1.99□□□□□ -2.09
TnfP06804 AC140477.1-201ENSMUST00000222354 246 ntBASIC1.99□□□□□ -2.09
TnfP06804 CT009733.1-203ENSMUST00000224033 451 ntBASIC1.99□□□□□ -2.09
TnfP06804 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
TnfP06804 Gm22723-201ENSMUST00000083820 129 ntBASIC1.99□□□□□ -2.09
TnfP06804 Gm23503-201ENSMUST00000083903 107 ntBASIC1.99□□□□□ -2.09
TnfP06804 Olfr575-201ENSMUST00000084812 957 ntBASIC1.99□□□□□ -2.09
TnfP06804 Gm3563-201ENSMUST00000172963 1628 ntBASIC1.99□□□□□ -2.09
TnfP06804 Gm26377-201ENSMUST00000102184 108 ntBASIC1.98□□□□□ -2.09
TnfP06804 Gm14894-201ENSMUST00000117170 270 ntBASIC1.98□□□□□ -2.09
TnfP06804 Gm14007-201ENSMUST00000118288 210 ntBASIC1.98□□□□□ -2.09
TnfP06804 Gm14835-201ENSMUST00000119039 315 ntBASIC1.98□□□□□ -2.09
TnfP06804 Gm23230-201ENSMUST00000157298 133 ntBASIC1.98□□□□□ -2.09
TnfP06804 Gm24768-201ENSMUST00000158512 94 ntBASIC1.98□□□□□ -2.09
TnfP06804 Zfp950-206ENSMUST00000178819 171 ntBASIC1.98□□□□□ -2.09
TnfP06804 Gm37449-201ENSMUST00000193016 270 ntBASIC1.98□□□□□ -2.09
TnfP06804 Gm37000-201ENSMUST00000193058 428 ntBASIC1.98□□□□□ -2.09
TnfP06804 Gm37757-201ENSMUST00000193072 210 ntBASIC1.98□□□□□ -2.09
TnfP06804 Trbv24-201ENSMUST00000194614 347 ntBASIC1.98□□□□□ -2.09
TnfP06804 Gm18658-201ENSMUST00000195558 270 ntBASIC1.98□□□□□ -2.09
TnfP06804 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
TnfP06804 Gm43978-201ENSMUST00000203491 451 ntBASIC1.98□□□□□ -2.09
TnfP06804 Gm18703-201ENSMUST00000215318 333 ntBASIC1.98□□□□□ -2.09
TnfP06804 AC113031.4-201ENSMUST00000228381 514 ntBASIC1.98□□□□□ -2.09
TnfP06804 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
TnfP06804 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
TnfP06804 Gm24921-201ENSMUST00000083024 107 ntBASIC1.98□□□□□ -2.09
TnfP06804 Snord14d-201ENSMUST00000083424 86 ntBASIC1.98□□□□□ -2.09
TnfP06804 Gm23040-201ENSMUST00000083869 163 ntBASIC1.98□□□□□ -2.09
TnfP06804 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
TnfP06804 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC1.98□□□□□ -2.09
TnfP06804 Gm45872-201ENSMUST00000209804 1584 ntBASIC1.98□□□□□ -2.09
TnfP06804 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
TnfP06804 Gm14932-201ENSMUST00000117112 453 ntBASIC1.97□□□□□ -2.09
TnfP06804 Gm14748-201ENSMUST00000119819 411 ntBASIC1.97□□□□□ -2.09
TnfP06804 Gm23324-201ENSMUST00000157421 131 ntBASIC1.97□□□□□ -2.09
TnfP06804 Gm26173-201ENSMUST00000158416 136 ntBASIC1.97□□□□□ -2.09
TnfP06804 Gm26024-201ENSMUST00000158657 322 ntBASIC1.97□□□□□ -2.09
TnfP06804 Gm22527-201ENSMUST00000158816 106 ntBASIC1.97□□□□□ -2.09
TnfP06804 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.97□□□□□ -2.09
TnfP06804 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.97□□□□□ -2.09
TnfP06804 Gm18416-201ENSMUST00000175635 1003 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 96.3 ms