Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC1.57□□□□□ -2.16
CopeO89079 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
CopeO89079 Gm45365-201ENSMUST00000209489 256 ntBASIC1.57□□□□□ -2.16
CopeO89079 AC152951.1-201ENSMUST00000218907 266 ntBASIC1.57□□□□□ -2.16
CopeO89079 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
CopeO89079 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC1.57□□□□□ -2.16
CopeO89079 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.57□□□□□ -2.16
CopeO89079 Gm43216-201ENSMUST00000196295 1333 ntBASIC1.57□□□□□ -2.16
CopeO89079 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CopeO89079 Gm23109-201ENSMUST00000116867 126 ntBASIC1.56□□□□□ -2.16
CopeO89079 Gm13728-201ENSMUST00000117471 400 ntBASIC1.56□□□□□ -2.16
CopeO89079 Gm15452-201ENSMUST00000119877 240 ntBASIC1.56□□□□□ -2.16
CopeO89079 Gm15115-201ENSMUST00000121145 264 ntBASIC1.56□□□□□ -2.16
CopeO89079 Gm11471-201ENSMUST00000121824 198 ntBASIC1.56□□□□□ -2.16
CopeO89079 Gm24895-201ENSMUST00000122742 74 ntBASIC1.56□□□□□ -2.16
CopeO89079 Gm23172-201ENSMUST00000157160 124 ntBASIC1.56□□□□□ -2.16
CopeO89079 Gm23956-201ENSMUST00000157211 119 ntBASIC1.56□□□□□ -2.16
CopeO89079 Gm22793-201ENSMUST00000157227 330 ntBASIC1.56□□□□□ -2.16
CopeO89079 Gm23381-201ENSMUST00000157676 94 ntBASIC1.56□□□□□ -2.16
CopeO89079 Gm24358-201ENSMUST00000158424 288 ntBASIC1.56□□□□□ -2.16
CopeO89079 Gm26024-201ENSMUST00000158657 322 ntBASIC1.56□□□□□ -2.16
CopeO89079 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.56□□□□□ -2.16
CopeO89079 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
CopeO89079 Mir3964-201ENSMUST00000174898 74 ntBASIC1.56□□□□□ -2.16
CopeO89079 Gm6660-201ENSMUST00000179149 468 ntBASIC1.56□□□□□ -2.16
CopeO89079 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC1.56□□□□□ -2.16
CopeO89079 Gm18775-201ENSMUST00000190763 586 ntBASIC1.56□□□□□ -2.16
CopeO89079 Gm7837-201ENSMUST00000190873 412 ntBASIC1.56□□□□□ -2.16
CopeO89079 Gm37081-201ENSMUST00000192034 196 ntBASIC1.56□□□□□ -2.16
CopeO89079 Gm37319-201ENSMUST00000193500 636 ntBASIC1.56□□□□□ -2.16
CopeO89079 Gm38154-201ENSMUST00000195444 340 ntBASIC1.56□□□□□ -2.16
CopeO89079 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC1.56□□□□□ -2.16
CopeO89079 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.56□□□□□ -2.16
CopeO89079 Gm45730-201ENSMUST00000212560 395 ntBASIC1.56□□□□□ -2.16
CopeO89079 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC1.56□□□□□ -2.16
CopeO89079 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.56□□□□□ -2.16
CopeO89079 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
CopeO89079 Gm23042-201ENSMUST00000083866 101 ntBASIC1.56□□□□□ -2.16
CopeO89079 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
CopeO89079 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.56□□□□□ -2.16
CopeO89079 Gm37630-201ENSMUST00000194210 1456 ntBASIC1.56□□□□□ -2.16
CopeO89079 Gm14674-201ENSMUST00000117816 342 ntBASIC1.55□□□□□ -2.16
CopeO89079 Gm6444-201ENSMUST00000119611 458 ntBASIC1.55□□□□□ -2.16
CopeO89079 Gm13903-201ENSMUST00000120945 193 ntBASIC1.55□□□□□ -2.16
CopeO89079 Gm15167-201ENSMUST00000121997 187 ntBASIC1.55□□□□□ -2.16
CopeO89079 Mir1949-201ENSMUST00000157434 141 ntBASIC1.55□□□□□ -2.16
CopeO89079 Gm23538-201ENSMUST00000157535 101 ntBASIC1.55□□□□□ -2.16
CopeO89079 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC1.55□□□□□ -2.16
CopeO89079 Gm17377-201ENSMUST00000165184 207 ntBASIC1.55□□□□□ -2.16
CopeO89079 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
CopeO89079 Mir6352-201ENSMUST00000184495 116 ntBASIC1.55□□□□□ -2.16
CopeO89079 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC1.55□□□□□ -2.16
CopeO89079 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC1.55□□□□□ -2.16
CopeO89079 Gm43652-201ENSMUST00000196219 675 ntBASIC1.55□□□□□ -2.16
CopeO89079 Gm42807-201ENSMUST00000200141 329 ntBASIC1.55□□□□□ -2.16
CopeO89079 Gm43578-201ENSMUST00000201250 459 ntBASIC1.55□□□□□ -2.16
CopeO89079 Gm45071-201ENSMUST00000205353 571 ntBASIC1.55□□□□□ -2.16
CopeO89079 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
CopeO89079 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
CopeO89079 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
CopeO89079 Gm3563-201ENSMUST00000172963 1628 ntBASIC1.55□□□□□ -2.16
CopeO89079 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CopeO89079 Gm13378-201ENSMUST00000117483 336 ntBASIC1.54□□□□□ -2.16
CopeO89079 Gm15211-201ENSMUST00000118932 528 ntBASIC1.54□□□□□ -2.16
CopeO89079 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC1.54□□□□□ -2.16
CopeO89079 Gm24780-201ENSMUST00000157635 143 ntBASIC1.54□□□□□ -2.16
CopeO89079 Snord11-201ENSMUST00000158468 84 ntBASIC1.54□□□□□ -2.16
CopeO89079 Gm24222-201ENSMUST00000158834 93 ntBASIC1.54□□□□□ -2.16
CopeO89079 Gm7592-201ENSMUST00000160674 627 ntBASIC1.54□□□□□ -2.16
CopeO89079 Gm17113-201ENSMUST00000170118 171 ntBASIC1.54□□□□□ -2.16
CopeO89079 Mir3092-201ENSMUST00000174954 96 ntBASIC1.54□□□□□ -2.16
CopeO89079 Gm25874-201ENSMUST00000178030 79 ntBASIC1.54□□□□□ -2.16
CopeO89079 Gm22264-201ENSMUST00000178200 107 ntBASIC1.54□□□□□ -2.16
CopeO89079 Mir6997-201ENSMUST00000184313 71 ntBASIC1.54□□□□□ -2.16
CopeO89079 Mir7241-201ENSMUST00000184532 64 ntBASIC1.54□□□□□ -2.16
CopeO89079 Gm28666-201ENSMUST00000186649 274 ntBASIC1.54□□□□□ -2.16
CopeO89079 Gm36966-201ENSMUST00000192217 413 ntBASIC1.54□□□□□ -2.16
CopeO89079 Mir378a-201ENSMUST00000198300 66 ntBASIC1.54□□□□□ -2.16
CopeO89079 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CopeO89079 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC1.54□□□□□ -2.16
CopeO89079 Gm29809-201ENSMUST00000218423 493 ntBASIC1.54□□□□□ -2.16
CopeO89079 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.54□□□□□ -2.16
CopeO89079 AC159621.1-201ENSMUST00000223249 163 ntBASIC1.54□□□□□ -2.16
CopeO89079 AC131085.1-201ENSMUST00000224746 656 ntBASIC1.54□□□□□ -2.16
CopeO89079 Mir467h-201ENSMUST00000116759 121 ntBASIC1.53□□□□□ -2.16
CopeO89079 Gm15714-201ENSMUST00000117168 250 ntBASIC1.53□□□□□ -2.16
CopeO89079 Gm13432-201ENSMUST00000118861 241 ntBASIC1.53□□□□□ -2.16
CopeO89079 Gm24839-201ENSMUST00000122602 107 ntBASIC1.53□□□□□ -2.16
CopeO89079 Gm15878-201ENSMUST00000127561 306 ntBASIC1.53□□□□□ -2.16
CopeO89079 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC1.53□□□□□ -2.16
CopeO89079 Gm24858-201ENSMUST00000158058 323 ntBASIC1.53□□□□□ -2.16
CopeO89079 Gm3025-201ENSMUST00000163454 489 ntBASIC1.53□□□□□ -2.16
CopeO89079 Gm7953-201ENSMUST00000168278 469 ntBASIC1.53□□□□□ -2.16
CopeO89079 Gm2878-201ENSMUST00000170173 486 ntBASIC1.53□□□□□ -2.16
CopeO89079 Gm4076-201ENSMUST00000179230 965 ntBASIC1.53□□□□□ -2.16
CopeO89079 Gm27878-201ENSMUST00000184000 106 ntBASIC1.53□□□□□ -2.16
CopeO89079 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.53□□□□□ -2.16
CopeO89079 Gm28412-201ENSMUST00000187243 177 ntBASIC1.53□□□□□ -2.16
CopeO89079 Gm44256-201ENSMUST00000203304 335 ntBASIC1.53□□□□□ -2.16
CopeO89079 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC1.53□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms