Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm25257-201ENSMUST00000083907 110 ntBASIC1.15□□□□□ -2.23
Hmgb3O54879 Gm24068-201ENSMUST00000104513 132 ntBASIC1.14□□□□□ -2.23
Hmgb3O54879 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
Hmgb3O54879 Gm15714-201ENSMUST00000117168 250 ntBASIC1.14□□□□□ -2.23
Hmgb3O54879 Gm13672-201ENSMUST00000117554 459 ntBASIC1.14□□□□□ -2.23
Hmgb3O54879 Gm6444-201ENSMUST00000119611 458 ntBASIC1.14□□□□□ -2.23
Hmgb3O54879 Gm14238-201ENSMUST00000120227 323 ntBASIC1.14□□□□□ -2.23
Hmgb3O54879 Gm25625-201ENSMUST00000157221 96 ntBASIC1.14□□□□□ -2.23
Hmgb3O54879 Gm25334-201ENSMUST00000158036 110 ntBASIC1.14□□□□□ -2.23
Hmgb3O54879 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.14□□□□□ -2.23
Hmgb3O54879 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC1.14□□□□□ -2.23
Hmgb3O54879 Gm22264-201ENSMUST00000178200 107 ntBASIC1.14□□□□□ -2.23
Hmgb3O54879 Mir7683-201ENSMUST00000183842 61 ntBASIC1.14□□□□□ -2.23
Hmgb3O54879 Mir6993-201ENSMUST00000184912 65 ntBASIC1.14□□□□□ -2.23
Hmgb3O54879 Gm29950-201ENSMUST00000195273 237 ntBASIC1.14□□□□□ -2.23
Hmgb3O54879 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.14□□□□□ -2.23
Hmgb3O54879 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
Hmgb3O54879 Gm44961-201ENSMUST00000207450 196 ntBASIC1.14□□□□□ -2.23
Hmgb3O54879 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.14□□□□□ -2.23
Hmgb3O54879 CR974485.1-201ENSMUST00000222408 402 ntBASIC1.14□□□□□ -2.23
Hmgb3O54879 AC154692.1-201ENSMUST00000228314 544 ntBASIC1.14□□□□□ -2.23
Hmgb3O54879 Gm26166-201ENSMUST00000083788 107 ntBASIC1.14□□□□□ -2.23
Hmgb3O54879 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
Hmgb3O54879 Gm25213-201ENSMUST00000102388 113 ntBASIC1.13□□□□□ -2.23
Hmgb3O54879 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.13□□□□□ -2.23
Hmgb3O54879 Gm11845-201ENSMUST00000117886 327 ntBASIC1.13□□□□□ -2.23
Hmgb3O54879 Gm2966-201ENSMUST00000166052 481 ntBASIC1.13□□□□□ -2.23
Hmgb3O54879 Gm6395-201ENSMUST00000167639 691 ntBASIC1.13□□□□□ -2.23
Hmgb3O54879 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC1.13□□□□□ -2.23
Hmgb3O54879 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC1.13□□□□□ -2.23
Hmgb3O54879 Mir7047-201ENSMUST00000184595 64 ntBASIC1.13□□□□□ -2.23
Hmgb3O54879 Gm29460-201ENSMUST00000188607 714 ntBASIC1.13□□□□□ -2.23
Hmgb3O54879 Gm28151-201ENSMUST00000189404 951 ntBASIC1.13□□□□□ -2.23
Hmgb3O54879 Gm44483-201ENSMUST00000197203 97 ntBASIC1.13□□□□□ -2.23
Hmgb3O54879 Gm18453-201ENSMUST00000208000 626 ntBASIC1.13□□□□□ -2.23
Hmgb3O54879 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
Hmgb3O54879 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.13□□□□□ -2.23
Hmgb3O54879 AC134860.6-201ENSMUST00000226038 285 ntBASIC1.13□□□□□ -2.23
Hmgb3O54879 Gm16976-205ENSMUST00000227324 226 ntBASIC1.13□□□□□ -2.23
Hmgb3O54879 AC135292.1-201ENSMUST00000227665 204 ntBASIC1.13□□□□□ -2.23
Hmgb3O54879 Gm3563-201ENSMUST00000172963 1628 ntBASIC1.13□□□□□ -2.23
Hmgb3O54879 AC117226.1-201ENSMUST00000221635 3737 ntBASIC1.13□□□□□ -2.23
Hmgb3O54879 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
Hmgb3O54879 Gm7869-201ENSMUST00000121457 1322 ntBASIC1.13□□□□□ -2.23
Hmgb3O54879 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
Hmgb3O54879 Gm22761-201ENSMUST00000102278 96 ntBASIC1.12□□□□□ -2.23
Hmgb3O54879 Gm22936-201ENSMUST00000103955 126 ntBASIC1.12□□□□□ -2.23
Hmgb3O54879 Gm11219-201ENSMUST00000118565 358 ntBASIC1.12□□□□□ -2.23
Hmgb3O54879 Gm23429-201ENSMUST00000122486 149 ntBASIC1.12□□□□□ -2.23
Hmgb3O54879 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC1.12□□□□□ -2.23
Hmgb3O54879 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC1.12□□□□□ -2.23
Hmgb3O54879 Gm6182-201ENSMUST00000156439 1208 ntBASIC1.12□□□□□ -2.23
Hmgb3O54879 Gm25333-201ENSMUST00000158035 246 ntBASIC1.12□□□□□ -2.23
Hmgb3O54879 Gm24551-201ENSMUST00000158645 92 ntBASIC1.12□□□□□ -2.23
Hmgb3O54879 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC1.12□□□□□ -2.23
Hmgb3O54879 Gm25020-201ENSMUST00000178071 107 ntBASIC1.12□□□□□ -2.23
Hmgb3O54879 Mir6341-201ENSMUST00000183490 121 ntBASIC1.12□□□□□ -2.23
Hmgb3O54879 Gm27493-201ENSMUST00000184128 78 ntBASIC1.12□□□□□ -2.23
Hmgb3O54879 Gm27588-201ENSMUST00000185096 263 ntBASIC1.12□□□□□ -2.23
Hmgb3O54879 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC1.12□□□□□ -2.23
Hmgb3O54879 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC1.12□□□□□ -2.23
Hmgb3O54879 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.12□□□□□ -2.23
Hmgb3O54879 AC167977.2-201ENSMUST00000225676 682 ntBASIC1.12□□□□□ -2.23
Hmgb3O54879 Gm7984-201ENSMUST00000060640 538 ntBASIC1.12□□□□□ -2.23
Hmgb3O54879 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
Hmgb3O54879 Gm25853-201ENSMUST00000082793 132 ntBASIC1.12□□□□□ -2.23
Hmgb3O54879 Mir320-201ENSMUST00000083594 82 ntBASIC1.12□□□□□ -2.23
Hmgb3O54879 Gm23104-201ENSMUST00000083722 104 ntBASIC1.12□□□□□ -2.23
Hmgb3O54879 Gm23733-201ENSMUST00000083750 106 ntBASIC1.12□□□□□ -2.23
Hmgb3O54879 Olfr575-201ENSMUST00000084812 957 ntBASIC1.12□□□□□ -2.23
Hmgb3O54879 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.12□□□□□ -2.23
Hmgb3O54879 Gm14445-201ENSMUST00000117051 1484 ntBASIC1.12□□□□□ -2.23
Hmgb3O54879 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
Hmgb3O54879 Gm26342-201ENSMUST00000104557 129 ntBASIC1.11□□□□□ -2.23
Hmgb3O54879 Gm12351-201ENSMUST00000118727 292 ntBASIC1.11□□□□□ -2.23
Hmgb3O54879 Gm14678-201ENSMUST00000121396 482 ntBASIC1.11□□□□□ -2.23
Hmgb3O54879 Gm23713-201ENSMUST00000157353 70 ntBASIC1.11□□□□□ -2.23
Hmgb3O54879 Gm22615-201ENSMUST00000158102 70 ntBASIC1.11□□□□□ -2.23
Hmgb3O54879 Gm26024-201ENSMUST00000158657 322 ntBASIC1.11□□□□□ -2.23
Hmgb3O54879 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC1.11□□□□□ -2.23
Hmgb3O54879 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
Hmgb3O54879 Gm28404-201ENSMUST00000190242 453 ntBASIC1.11□□□□□ -2.23
Hmgb3O54879 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC1.11□□□□□ -2.23
Hmgb3O54879 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.11□□□□□ -2.23
Hmgb3O54879 AL645546.2-201ENSMUST00000224526 265 ntBASIC1.11□□□□□ -2.23
Hmgb3O54879 AC124569.1-201ENSMUST00000225932 101 ntBASIC1.11□□□□□ -2.23
Hmgb3O54879 Mir148b-201ENSMUST00000083626 97 ntBASIC1.11□□□□□ -2.23
Hmgb3O54879 Gm24254-201ENSMUST00000083702 104 ntBASIC1.11□□□□□ -2.23
Hmgb3O54879 Gm42770-201ENSMUST00000199657 4155 ntBASIC1.11□□□□□ -2.23
Hmgb3O54879 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.1□□□□□ -2.23
Hmgb3O54879 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
Hmgb3O54879 Mir653-201ENSMUST00000102402 85 ntBASIC1.1□□□□□ -2.23
Hmgb3O54879 Gm25495-201ENSMUST00000104431 131 ntBASIC1.1□□□□□ -2.23
Hmgb3O54879 Gm13439-201ENSMUST00000117541 409 ntBASIC1.1□□□□□ -2.23
Hmgb3O54879 Gm14215-201ENSMUST00000120578 221 ntBASIC1.1□□□□□ -2.23
Hmgb3O54879 Gm22338-201ENSMUST00000157715 129 ntBASIC1.1□□□□□ -2.23
Hmgb3O54879 Gm22389-201ENSMUST00000158193 301 ntBASIC1.1□□□□□ -2.23
Hmgb3O54879 Gm22074-201ENSMUST00000158595 113 ntBASIC1.1□□□□□ -2.23
Hmgb3O54879 Gm18397-201ENSMUST00000176704 587 ntBASIC1.1□□□□□ -2.23
Hmgb3O54879 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC1.1□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 127.4 ms