Protein–RNA interactions for Protein: O54786

Dffa, DNA fragmentation factor subunit alpha, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffaO54786 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
DffaO54786 Gm22980-201ENSMUST00000082608 70 ntBASIC1.21□□□□□ -2.22
DffaO54786 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.2□□□□□ -2.22
DffaO54786 Mir653-201ENSMUST00000102402 85 ntBASIC1.2□□□□□ -2.22
DffaO54786 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
DffaO54786 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.2□□□□□ -2.22
DffaO54786 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC1.2□□□□□ -2.22
DffaO54786 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
DffaO54786 Gm44391-201ENSMUST00000198490 93 ntBASIC1.2□□□□□ -2.22
DffaO54786 Gm17991-201ENSMUST00000208139 297 ntBASIC1.2□□□□□ -2.22
DffaO54786 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC1.2□□□□□ -2.22
DffaO54786 AC116726.2-201ENSMUST00000217629 986 ntBASIC1.2□□□□□ -2.22
DffaO54786 AC172027.1-201ENSMUST00000217659 337 ntBASIC1.2□□□□□ -2.22
DffaO54786 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.2□□□□□ -2.22
DffaO54786 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC1.2□□□□□ -2.22
DffaO54786 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
DffaO54786 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
DffaO54786 Snord14a-201ENSMUST00000082807 87 ntBASIC1.2□□□□□ -2.22
DffaO54786 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
DffaO54786 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC1.19□□□□□ -2.22
DffaO54786 Gm7429-201ENSMUST00000118664 348 ntBASIC1.19□□□□□ -2.22
DffaO54786 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC1.19□□□□□ -2.22
DffaO54786 Gm14428-201ENSMUST00000120408 822 ntBASIC1.19□□□□□ -2.22
DffaO54786 Gm14678-201ENSMUST00000121396 482 ntBASIC1.19□□□□□ -2.22
DffaO54786 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC1.19□□□□□ -2.22
DffaO54786 Mir3086-201ENSMUST00000175072 87 ntBASIC1.19□□□□□ -2.22
DffaO54786 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
DffaO54786 Mir3087-201ENSMUST00000199405 56 ntBASIC1.19□□□□□ -2.22
DffaO54786 Gm42739-201ENSMUST00000200687 226 ntBASIC1.19□□□□□ -2.22
DffaO54786 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC1.19□□□□□ -2.22
DffaO54786 CT030238.4-201ENSMUST00000228579 801 ntBASIC1.19□□□□□ -2.22
DffaO54786 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
DffaO54786 Gm25853-201ENSMUST00000082793 132 ntBASIC1.19□□□□□ -2.22
DffaO54786 Gm22443-201ENSMUST00000082890 107 ntBASIC1.19□□□□□ -2.22
DffaO54786 Gm23246-201ENSMUST00000083371 67 ntBASIC1.19□□□□□ -2.22
DffaO54786 Gm14657-201ENSMUST00000117461 302 ntBASIC1.18□□□□□ -2.22
DffaO54786 Gm13409-201ENSMUST00000122072 546 ntBASIC1.18□□□□□ -2.22
DffaO54786 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC1.18□□□□□ -2.22
DffaO54786 Gm23713-201ENSMUST00000157353 70 ntBASIC1.18□□□□□ -2.22
DffaO54786 Gm23083-201ENSMUST00000157851 116 ntBASIC1.18□□□□□ -2.22
DffaO54786 Gm26089-201ENSMUST00000157898 107 ntBASIC1.18□□□□□ -2.22
DffaO54786 Gm22615-201ENSMUST00000158102 70 ntBASIC1.18□□□□□ -2.22
DffaO54786 Gm22944-201ENSMUST00000158662 133 ntBASIC1.18□□□□□ -2.22
DffaO54786 Gm22663-201ENSMUST00000158721 102 ntBASIC1.18□□□□□ -2.22
DffaO54786 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC1.18□□□□□ -2.22
DffaO54786 Gm22111-201ENSMUST00000178010 79 ntBASIC1.18□□□□□ -2.22
DffaO54786 Gm23687-201ENSMUST00000178664 79 ntBASIC1.18□□□□□ -2.22
DffaO54786 Gm24566-201ENSMUST00000179286 79 ntBASIC1.18□□□□□ -2.22
DffaO54786 Gm23305-201ENSMUST00000179342 79 ntBASIC1.18□□□□□ -2.22
DffaO54786 Gm26389-201ENSMUST00000179819 79 ntBASIC1.18□□□□□ -2.22
DffaO54786 Gm22130-201ENSMUST00000179979 79 ntBASIC1.18□□□□□ -2.22
DffaO54786 Gm22393-201ENSMUST00000180153 79 ntBASIC1.18□□□□□ -2.22
DffaO54786 Gm25085-201ENSMUST00000180298 79 ntBASIC1.18□□□□□ -2.22
DffaO54786 Gm37029-201ENSMUST00000195773 239 ntBASIC1.18□□□□□ -2.22
DffaO54786 Gm43955-201ENSMUST00000204332 142 ntBASIC1.18□□□□□ -2.22
DffaO54786 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC1.18□□□□□ -2.22
DffaO54786 AC167202.1-201ENSMUST00000219027 331 ntBASIC1.18□□□□□ -2.22
DffaO54786 AC158388.1-201ENSMUST00000225441 256 ntBASIC1.18□□□□□ -2.22
DffaO54786 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
DffaO54786 Gm22247-201ENSMUST00000082476 131 ntBASIC1.18□□□□□ -2.22
DffaO54786 Gm23100-201ENSMUST00000083455 141 ntBASIC1.18□□□□□ -2.22
DffaO54786 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
DffaO54786 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
DffaO54786 Gm14774-201ENSMUST00000117857 536 ntBASIC1.17□□□□□ -2.22
DffaO54786 Gm13087-201ENSMUST00000118298 256 ntBASIC1.17□□□□□ -2.22
DffaO54786 Gm11785-201ENSMUST00000120165 601 ntBASIC1.17□□□□□ -2.22
DffaO54786 Gm24846-201ENSMUST00000158033 108 ntBASIC1.17□□□□□ -2.22
DffaO54786 Gm7953-201ENSMUST00000168278 469 ntBASIC1.17□□□□□ -2.22
DffaO54786 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC1.17□□□□□ -2.22
DffaO54786 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC1.17□□□□□ -2.22
DffaO54786 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
DffaO54786 Gm28825-201ENSMUST00000186233 238 ntBASIC1.17□□□□□ -2.22
DffaO54786 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
DffaO54786 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
DffaO54786 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC1.17□□□□□ -2.22
DffaO54786 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
DffaO54786 AC069561.3-201ENSMUST00000217321 114 ntBASIC1.17□□□□□ -2.22
DffaO54786 Gm35558-202ENSMUST00000221819 499 ntBASIC1.17□□□□□ -2.22
DffaO54786 AC151902.1-201ENSMUST00000227800 375 ntBASIC1.17□□□□□ -2.22
DffaO54786 Snora3-201ENSMUST00000083082 132 ntBASIC1.17□□□□□ -2.22
DffaO54786 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
DffaO54786 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
DffaO54786 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
DffaO54786 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC1.16□□□□□ -2.22
DffaO54786 Gm18360-201ENSMUST00000173327 1524 ntBASIC1.16□□□□□ -2.22
DffaO54786 Gm25759-201ENSMUST00000103988 129 ntBASIC1.16□□□□□ -2.22
DffaO54786 Gm12656-201ENSMUST00000118149 577 ntBASIC1.16□□□□□ -2.22
DffaO54786 Gm15193-201ENSMUST00000120224 865 ntBASIC1.16□□□□□ -2.22
DffaO54786 Gm22217-201ENSMUST00000157556 313 ntBASIC1.16□□□□□ -2.22
DffaO54786 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
DffaO54786 Gm24333-201ENSMUST00000175101 84 ntBASIC1.16□□□□□ -2.22
DffaO54786 Gm29231-201ENSMUST00000179850 319 ntBASIC1.16□□□□□ -2.22
DffaO54786 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC1.16□□□□□ -2.22
DffaO54786 Gm42774-201ENSMUST00000198854 283 ntBASIC1.16□□□□□ -2.22
DffaO54786 Gm43659-201ENSMUST00000200894 628 ntBASIC1.16□□□□□ -2.22
DffaO54786 Gm45207-201ENSMUST00000207469 145 ntBASIC1.16□□□□□ -2.22
DffaO54786 Gm7692-201ENSMUST00000213534 409 ntBASIC1.16□□□□□ -2.22
DffaO54786 AC122225.1-201ENSMUST00000215641 369 ntBASIC1.16□□□□□ -2.22
DffaO54786 Gm9068-201ENSMUST00000217393 455 ntBASIC1.16□□□□□ -2.22
DffaO54786 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 106.9 ms