Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm22535-201ENSMUST00000158174 119 ntBASIC0.67□□□□□ -2.3
Ccdc180J3QNE4 Gm17061-201ENSMUST00000163167 499 ntBASIC0.67□□□□□ -2.3
Ccdc180J3QNE4 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
Ccdc180J3QNE4 Gm25035-201ENSMUST00000175414 77 ntBASIC0.67□□□□□ -2.3
Ccdc180J3QNE4 Gm29184-201ENSMUST00000190038 334 ntBASIC0.67□□□□□ -2.3
Ccdc180J3QNE4 Gm36966-201ENSMUST00000192217 413 ntBASIC0.67□□□□□ -2.3
Ccdc180J3QNE4 Gm43493-201ENSMUST00000199837 202 ntBASIC0.67□□□□□ -2.3
Ccdc180J3QNE4 Igkv11-114-201ENSMUST00000200013 346 ntBASIC0.67□□□□□ -2.3
Ccdc180J3QNE4 Gm43228-201ENSMUST00000200735 264 ntBASIC0.67□□□□□ -2.3
Ccdc180J3QNE4 Gm44828-201ENSMUST00000203745 106 ntBASIC0.67□□□□□ -2.3
Ccdc180J3QNE4 Gm34701-202ENSMUST00000204685 360 ntBASIC0.67□□□□□ -2.3
Ccdc180J3QNE4 Gm2446-201ENSMUST00000220144 772 ntBASIC0.67□□□□□ -2.3
Ccdc180J3QNE4 Gm25853-201ENSMUST00000082793 132 ntBASIC0.67□□□□□ -2.3
Ccdc180J3QNE4 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
Ccdc180J3QNE4 Gm22957-201ENSMUST00000122511 123 ntBASIC0.66□□□□□ -2.3
Ccdc180J3QNE4 Gm24915-201ENSMUST00000157288 78 ntBASIC0.66□□□□□ -2.3
Ccdc180J3QNE4 Gm26213-201ENSMUST00000158582 110 ntBASIC0.66□□□□□ -2.3
Ccdc180J3QNE4 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
Ccdc180J3QNE4 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
Ccdc180J3QNE4 Gm23181-201ENSMUST00000158685 110 ntBASIC0.65□□□□□ -2.3
Ccdc180J3QNE4 Nron-204ENSMUST00000158971 370 ntBASIC0.65□□□□□ -2.3
Ccdc180J3QNE4 Gm29647-201ENSMUST00000188795 666 ntBASIC0.65□□□□□ -2.3
Ccdc180J3QNE4 Gm28504-201ENSMUST00000190977 666 ntBASIC0.65□□□□□ -2.3
Ccdc180J3QNE4 Gm42623-201ENSMUST00000197225 379 ntBASIC0.65□□□□□ -2.3
Ccdc180J3QNE4 Gm43286-201ENSMUST00000197420 424 ntBASIC0.65□□□□□ -2.3
Ccdc180J3QNE4 Gm44655-201ENSMUST00000207768 423 ntBASIC0.65□□□□□ -2.3
Ccdc180J3QNE4 Mir151-201ENSMUST00000083678 68 ntBASIC0.65□□□□□ -2.3
Ccdc180J3QNE4 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.3
Ccdc180J3QNE4 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC0.65□□□□□ -2.31
Ccdc180J3QNE4 Mir653-201ENSMUST00000102402 85 ntBASIC0.65□□□□□ -2.31
Ccdc180J3QNE4 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.65□□□□□ -2.31
Ccdc180J3QNE4 Gm23339-201ENSMUST00000158962 139 ntBASIC0.65□□□□□ -2.31
Ccdc180J3QNE4 Gm42625-201ENSMUST00000198611 922 ntBASIC0.65□□□□□ -2.31
Ccdc180J3QNE4 Gm7692-201ENSMUST00000213534 409 ntBASIC0.65□□□□□ -2.31
Ccdc180J3QNE4 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
Ccdc180J3QNE4 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
Ccdc180J3QNE4 Gm13541-201ENSMUST00000119519 283 ntBASIC0.64□□□□□ -2.31
Ccdc180J3QNE4 Gm25961-201ENSMUST00000157174 135 ntBASIC0.64□□□□□ -2.31
Ccdc180J3QNE4 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
Ccdc180J3QNE4 Gm26116-201ENSMUST00000175600 77 ntBASIC0.64□□□□□ -2.31
Ccdc180J3QNE4 Gm37000-201ENSMUST00000193058 428 ntBASIC0.64□□□□□ -2.31
Ccdc180J3QNE4 AC115047.1-201ENSMUST00000213795 322 ntBASIC0.64□□□□□ -2.31
Ccdc180J3QNE4 Gm46194-201ENSMUST00000218136 320 ntBASIC0.64□□□□□ -2.31
Ccdc180J3QNE4 Gm3333-202ENSMUST00000221763 1044 ntBASIC0.64□□□□□ -2.31
Ccdc180J3QNE4 Mir32-201ENSMUST00000083610 70 ntBASIC0.64□□□□□ -2.31
Ccdc180J3QNE4 Gm23040-201ENSMUST00000083869 163 ntBASIC0.64□□□□□ -2.31
Ccdc180J3QNE4 Gm20541-201ENSMUST00000173035 1406 ntBASIC0.63□□□□□ -2.31
Ccdc180J3QNE4 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC0.63□□□□□ -2.31
Ccdc180J3QNE4 Gm23172-201ENSMUST00000157160 124 ntBASIC0.63□□□□□ -2.31
Ccdc180J3QNE4 Gm27869-201ENSMUST00000184327 122 ntBASIC0.63□□□□□ -2.31
Ccdc180J3QNE4 Gm9541-201ENSMUST00000188409 502 ntBASIC0.63□□□□□ -2.31
Ccdc180J3QNE4 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC0.63□□□□□ -2.31
Ccdc180J3QNE4 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC0.63□□□□□ -2.31
Ccdc180J3QNE4 Mir107-201ENSMUST00000083660 87 ntBASIC0.63□□□□□ -2.31
Ccdc180J3QNE4 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC0.62□□□□□ -2.31
Ccdc180J3QNE4 Gm26152-201ENSMUST00000157427 101 ntBASIC0.62□□□□□ -2.31
Ccdc180J3QNE4 Gm25838-201ENSMUST00000158920 120 ntBASIC0.62□□□□□ -2.31
Ccdc180J3QNE4 Gm44295-201ENSMUST00000203805 437 ntBASIC0.62□□□□□ -2.31
Ccdc180J3QNE4 AC122242.1-201ENSMUST00000224650 304 ntBASIC0.62□□□□□ -2.31
Ccdc180J3QNE4 Gm11845-201ENSMUST00000117886 327 ntBASIC0.62□□□□□ -2.31
Ccdc180J3QNE4 Gm6664-201ENSMUST00000119138 468 ntBASIC0.62□□□□□ -2.31
Ccdc180J3QNE4 Gm14731-201ENSMUST00000119216 376 ntBASIC0.62□□□□□ -2.31
Ccdc180J3QNE4 Gm23887-201ENSMUST00000122683 172 ntBASIC0.62□□□□□ -2.31
Ccdc180J3QNE4 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC0.62□□□□□ -2.31
Ccdc180J3QNE4 Snord43-201ENSMUST00000199549 108 ntBASIC0.62□□□□□ -2.31
Ccdc180J3QNE4 Gm44254-201ENSMUST00000204184 322 ntBASIC0.62□□□□□ -2.31
Ccdc180J3QNE4 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
Ccdc180J3QNE4 Gm37761-201ENSMUST00000194989 2098 ntBASIC0.61□□□□□ -2.31
Ccdc180J3QNE4 Gm15126-201ENSMUST00000118631 833 ntBASIC0.61□□□□□ -2.31
Ccdc180J3QNE4 Gm12646-201ENSMUST00000119144 238 ntBASIC0.61□□□□□ -2.31
Ccdc180J3QNE4 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC0.61□□□□□ -2.31
Ccdc180J3QNE4 AC154328.1-201ENSMUST00000225875 307 ntBASIC0.61□□□□□ -2.31
Ccdc180J3QNE4 Mir124a-3-201ENSMUST00000083520 68 ntBASIC0.61□□□□□ -2.31
Ccdc180J3QNE4 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
Ccdc180J3QNE4 Mup-ps15-201ENSMUST00000121741 539 ntBASIC0.6□□□□□ -2.31
Ccdc180J3QNE4 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.6□□□□□ -2.31
Ccdc180J3QNE4 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
Ccdc180J3QNE4 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.6□□□□□ -2.31
Ccdc180J3QNE4 Gm10298-201ENSMUST00000074801 265 ntBASIC0.6□□□□□ -2.31
Ccdc180J3QNE4 Snord35a-201ENSMUST00000083884 90 ntBASIC0.6□□□□□ -2.31
Ccdc180J3QNE4 Mir19b-1-201ENSMUST00000102301 87 ntBASIC0.59□□□□□ -2.31
Ccdc180J3QNE4 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
Ccdc180J3QNE4 Traj60-201ENSMUST00000167781 54 ntBASIC0.59□□□□□ -2.31
Ccdc180J3QNE4 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC0.59□□□□□ -2.31
Ccdc180J3QNE4 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.31
Ccdc180J3QNE4 Gm37399-201ENSMUST00000195224 416 ntBASIC0.59□□□□□ -2.31
Ccdc180J3QNE4 Gm43894-201ENSMUST00000203274 688 ntBASIC0.59□□□□□ -2.31
Ccdc180J3QNE4 Gm44055-201ENSMUST00000204376 247 ntBASIC0.59□□□□□ -2.31
Ccdc180J3QNE4 Gm23924-201ENSMUST00000082474 108 ntBASIC0.59□□□□□ -2.31
Ccdc180J3QNE4 Gm23723-201ENSMUST00000082996 132 ntBASIC0.59□□□□□ -2.31
Ccdc180J3QNE4 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.32
Ccdc180J3QNE4 Mup-ps21-201ENSMUST00000119998 448 ntBASIC0.59□□□□□ -2.32
Ccdc180J3QNE4 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC0.59□□□□□ -2.32
Ccdc180J3QNE4 Gm42672-201ENSMUST00000197821 352 ntBASIC0.59□□□□□ -2.32
Ccdc180J3QNE4 AC098718.1-201ENSMUST00000226166 175 ntBASIC0.59□□□□□ -2.32
Ccdc180J3QNE4 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC0.58□□□□□ -2.32
Ccdc180J3QNE4 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
Ccdc180J3QNE4 Gm13672-201ENSMUST00000117554 459 ntBASIC0.58□□□□□ -2.32
Ccdc180J3QNE4 Gm6956-201ENSMUST00000134724 546 ntBASIC0.58□□□□□ -2.32
Ccdc180J3QNE4 Gm25718-201ENSMUST00000158632 118 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 96 ms