Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm9765-201ENSMUST00000043170 321 ntBASIC4.55□□□□□ -1.68
NpcdF8VQB8 Mir30e-201ENSMUST00000083475 92 ntBASIC4.55□□□□□ -1.68
NpcdF8VQB8 Gm5596-201ENSMUST00000207988 2421 ntBASIC4.55□□□□□ -1.68
NpcdF8VQB8 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NpcdF8VQB8 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
NpcdF8VQB8 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NpcdF8VQB8 Gm44525-201ENSMUST00000183129 2634 ntBASIC4.55□□□□□ -1.68
NpcdF8VQB8 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
NpcdF8VQB8 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NpcdF8VQB8 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC4.54□□□□□ -1.68
NpcdF8VQB8 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC4.54□□□□□ -1.68
NpcdF8VQB8 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC4.54□□□□□ -1.68
NpcdF8VQB8 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC4.54□□□□□ -1.68
NpcdF8VQB8 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NpcdF8VQB8 Gm26187-201ENSMUST00000157693 101 ntBASIC4.54□□□□□ -1.68
NpcdF8VQB8 Gm25384-201ENSMUST00000157807 105 ntBASIC4.54□□□□□ -1.68
NpcdF8VQB8 Gm25860-201ENSMUST00000158252 126 ntBASIC4.54□□□□□ -1.68
NpcdF8VQB8 Gm23196-201ENSMUST00000158806 107 ntBASIC4.54□□□□□ -1.68
NpcdF8VQB8 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC4.54□□□□□ -1.68
NpcdF8VQB8 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC4.54□□□□□ -1.68
NpcdF8VQB8 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC4.54□□□□□ -1.68
NpcdF8VQB8 Gm36944-201ENSMUST00000192257 2759 ntBASIC4.54□□□□□ -1.68
NpcdF8VQB8 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NpcdF8VQB8 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NpcdF8VQB8 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
NpcdF8VQB8 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
NpcdF8VQB8 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
NpcdF8VQB8 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
NpcdF8VQB8 Gm23705-201ENSMUST00000104370 130 ntBASIC4.53□□□□□ -1.68
NpcdF8VQB8 Gm23653-201ENSMUST00000116751 97 ntBASIC4.53□□□□□ -1.68
NpcdF8VQB8 Gm11572-201ENSMUST00000119164 120 ntBASIC4.53□□□□□ -1.68
NpcdF8VQB8 Gm22654-201ENSMUST00000157874 105 ntBASIC4.53□□□□□ -1.68
NpcdF8VQB8 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC4.53□□□□□ -1.68
NpcdF8VQB8 Mir6383-201ENSMUST00000184545 116 ntBASIC4.53□□□□□ -1.68
NpcdF8VQB8 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC4.53□□□□□ -1.68
NpcdF8VQB8 Gm38332-201ENSMUST00000194189 147 ntBASIC4.53□□□□□ -1.68
NpcdF8VQB8 Gm43829-201ENSMUST00000196191 3802 ntBASIC4.53□□□□□ -1.68
NpcdF8VQB8 Mir3535-201ENSMUST00000197651 147 ntBASIC4.53□□□□□ -1.68
NpcdF8VQB8 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC4.53□□□□□ -1.68
NpcdF8VQB8 AC155715.1-201ENSMUST00000213575 463 ntBASIC4.53□□□□□ -1.68
NpcdF8VQB8 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC4.53□□□□□ -1.68
NpcdF8VQB8 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC4.53□□□□□ -1.68
NpcdF8VQB8 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NpcdF8VQB8 Gm12080-201ENSMUST00000119821 1883 ntBASIC4.53□□□□□ -1.68
NpcdF8VQB8 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
NpcdF8VQB8 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NpcdF8VQB8 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
NpcdF8VQB8 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
NpcdF8VQB8 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NpcdF8VQB8 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NpcdF8VQB8 AC154386.1-201ENSMUST00000222753 2871 ntBASIC4.52□□□□□ -1.69
NpcdF8VQB8 AC104897.1-201ENSMUST00000222638 3628 ntBASIC4.52□□□□□ -1.69
NpcdF8VQB8 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NpcdF8VQB8 Gm13581-201ENSMUST00000120675 278 ntBASIC4.52□□□□□ -1.69
NpcdF8VQB8 Gm22482-201ENSMUST00000122563 359 ntBASIC4.52□□□□□ -1.69
NpcdF8VQB8 Gm11281-201ENSMUST00000141391 576 ntBASIC4.52□□□□□ -1.69
NpcdF8VQB8 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NpcdF8VQB8 Gm23232-201ENSMUST00000157300 105 ntBASIC4.52□□□□□ -1.69
NpcdF8VQB8 Gm25391-201ENSMUST00000157342 134 ntBASIC4.52□□□□□ -1.69
NpcdF8VQB8 Gm37713-201ENSMUST00000191746 198 ntBASIC4.52□□□□□ -1.69
NpcdF8VQB8 Gm37763-201ENSMUST00000193445 120 ntBASIC4.52□□□□□ -1.69
NpcdF8VQB8 Igkv9-128-201ENSMUST00000196602 353 ntBASIC4.52□□□□□ -1.69
NpcdF8VQB8 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC4.52□□□□□ -1.69
NpcdF8VQB8 Gm45380-201ENSMUST00000210465 315 ntBASIC4.52□□□□□ -1.69
NpcdF8VQB8 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC4.52□□□□□ -1.69
NpcdF8VQB8 Gm22247-201ENSMUST00000082476 131 ntBASIC4.52□□□□□ -1.69
NpcdF8VQB8 Gm24533-201ENSMUST00000083138 196 ntBASIC4.52□□□□□ -1.69
NpcdF8VQB8 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC4.52□□□□□ -1.69
NpcdF8VQB8 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.52□□□□□ -1.69
NpcdF8VQB8 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
NpcdF8VQB8 Gm42870-201ENSMUST00000199355 3470 ntBASIC4.52□□□□□ -1.69
NpcdF8VQB8 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
NpcdF8VQB8 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
NpcdF8VQB8 Gm43881-201ENSMUST00000203051 2530 ntBASIC4.51□□□□□ -1.69
NpcdF8VQB8 AC155830.1-201ENSMUST00000220050 3836 ntBASIC4.51□□□□□ -1.69
NpcdF8VQB8 AC153522.2-201ENSMUST00000218389 3853 ntBASIC4.51□□□□□ -1.69
NpcdF8VQB8 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
NpcdF8VQB8 Mir465b-1-201ENSMUST00000103940 79 ntBASIC4.51□□□□□ -1.69
NpcdF8VQB8 Mir465b-2-201ENSMUST00000104662 79 ntBASIC4.51□□□□□ -1.69
NpcdF8VQB8 Gm15896-201ENSMUST00000118045 440 ntBASIC4.51□□□□□ -1.69
NpcdF8VQB8 Gm26479-201ENSMUST00000122620 106 ntBASIC4.51□□□□□ -1.69
NpcdF8VQB8 Gm24727-201ENSMUST00000158231 144 ntBASIC4.51□□□□□ -1.69
NpcdF8VQB8 Gm25162-201ENSMUST00000158906 159 ntBASIC4.51□□□□□ -1.69
NpcdF8VQB8 Gm22308-201ENSMUST00000177609 107 ntBASIC4.51□□□□□ -1.69
NpcdF8VQB8 Gm28500-201ENSMUST00000190286 151 ntBASIC4.51□□□□□ -1.69
NpcdF8VQB8 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC4.51□□□□□ -1.69
NpcdF8VQB8 Gm44084-201ENSMUST00000203947 409 ntBASIC4.51□□□□□ -1.69
NpcdF8VQB8 Gm25078-201ENSMUST00000082530 107 ntBASIC4.51□□□□□ -1.69
NpcdF8VQB8 Gm22997-201ENSMUST00000082845 107 ntBASIC4.51□□□□□ -1.69
NpcdF8VQB8 Gm22973-201ENSMUST00000083298 191 ntBASIC4.51□□□□□ -1.69
NpcdF8VQB8 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
NpcdF8VQB8 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
NpcdF8VQB8 Gm37498-201ENSMUST00000193524 4002 ntBASIC4.51□□□□□ -1.69
NpcdF8VQB8 Gm42770-201ENSMUST00000199657 4155 ntBASIC4.51□□□□□ -1.69
NpcdF8VQB8 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NpcdF8VQB8 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
NpcdF8VQB8 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
NpcdF8VQB8 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NpcdF8VQB8 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
NpcdF8VQB8 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms