Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm24959-201ENSMUST00000157924 146 ntBASIC0.72□□□□□ -2.29
Col4a6B1AVK5 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.72□□□□□ -2.29
Col4a6B1AVK5 Mir7077-201ENSMUST00000183991 57 ntBASIC0.72□□□□□ -2.29
Col4a6B1AVK5 Gm45386-201ENSMUST00000210194 218 ntBASIC0.72□□□□□ -2.29
Col4a6B1AVK5 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC0.72□□□□□ -2.29
Col4a6B1AVK5 CT485608.2-201ENSMUST00000227210 291 ntBASIC0.72□□□□□ -2.29
Col4a6B1AVK5 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC0.72□□□□□ -2.29
Col4a6B1AVK5 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
Col4a6B1AVK5 Gm22559-201ENSMUST00000157329 134 ntBASIC0.71□□□□□ -2.3
Col4a6B1AVK5 Gm20630-201ENSMUST00000177387 551 ntBASIC0.71□□□□□ -2.3
Col4a6B1AVK5 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC0.71□□□□□ -2.3
Col4a6B1AVK5 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC0.71□□□□□ -2.3
Col4a6B1AVK5 Gm37000-201ENSMUST00000193058 428 ntBASIC0.71□□□□□ -2.3
Col4a6B1AVK5 Gm37979-201ENSMUST00000193065 712 ntBASIC0.71□□□□□ -2.3
Col4a6B1AVK5 Ighv12-1-201ENSMUST00000195542 329 ntBASIC0.71□□□□□ -2.3
Col4a6B1AVK5 Gm29920-201ENSMUST00000206876 754 ntBASIC0.71□□□□□ -2.3
Col4a6B1AVK5 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.71□□□□□ -2.3
Col4a6B1AVK5 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
Col4a6B1AVK5 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
Col4a6B1AVK5 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
Col4a6B1AVK5 Gm14674-201ENSMUST00000117816 342 ntBASIC0.7□□□□□ -2.3
Col4a6B1AVK5 Gm13085-201ENSMUST00000118356 171 ntBASIC0.7□□□□□ -2.3
Col4a6B1AVK5 Gm9703-201ENSMUST00000119573 343 ntBASIC0.7□□□□□ -2.3
Col4a6B1AVK5 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC0.7□□□□□ -2.3
Col4a6B1AVK5 Gm23429-201ENSMUST00000122486 149 ntBASIC0.7□□□□□ -2.3
Col4a6B1AVK5 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
Col4a6B1AVK5 Mir6896-201ENSMUST00000198033 73 ntBASIC0.7□□□□□ -2.3
Col4a6B1AVK5 AC098718.1-201ENSMUST00000226166 175 ntBASIC0.7□□□□□ -2.3
Col4a6B1AVK5 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC0.69□□□□□ -2.3
Col4a6B1AVK5 Gm13806-201ENSMUST00000117822 325 ntBASIC0.69□□□□□ -2.3
Col4a6B1AVK5 Gm14623-201ENSMUST00000121398 603 ntBASIC0.69□□□□□ -2.3
Col4a6B1AVK5 Gm14840-201ENSMUST00000122135 594 ntBASIC0.69□□□□□ -2.3
Col4a6B1AVK5 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC0.69□□□□□ -2.3
Col4a6B1AVK5 Gm26355-201ENSMUST00000158220 105 ntBASIC0.69□□□□□ -2.3
Col4a6B1AVK5 Gm17085-201ENSMUST00000165425 502 ntBASIC0.69□□□□□ -2.3
Col4a6B1AVK5 Gm7346-201ENSMUST00000169661 476 ntBASIC0.69□□□□□ -2.3
Col4a6B1AVK5 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
Col4a6B1AVK5 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
Col4a6B1AVK5 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
Col4a6B1AVK5 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC0.69□□□□□ -2.3
Col4a6B1AVK5 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC0.69□□□□□ -2.3
Col4a6B1AVK5 AC165293.1-201ENSMUST00000219669 329 ntBASIC0.69□□□□□ -2.3
Col4a6B1AVK5 Gm9318-201ENSMUST00000222444 438 ntBASIC0.69□□□□□ -2.3
Col4a6B1AVK5 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
Col4a6B1AVK5 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC0.69□□□□□ -2.3
Col4a6B1AVK5 AC154252.1-201ENSMUST00000226041 473 ntBASIC0.69□□□□□ -2.3
Col4a6B1AVK5 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC0.69□□□□□ -2.3
Col4a6B1AVK5 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
Col4a6B1AVK5 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC0.69□□□□□ -2.3
Col4a6B1AVK5 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC0.69□□□□□ -2.3
Col4a6B1AVK5 Gm11784-201ENSMUST00000118568 474 ntBASIC0.69□□□□□ -2.3
Col4a6B1AVK5 Gm15126-201ENSMUST00000118631 833 ntBASIC0.69□□□□□ -2.3
Col4a6B1AVK5 Gm15029-201ENSMUST00000119742 199 ntBASIC0.69□□□□□ -2.3
Col4a6B1AVK5 Gm12096-201ENSMUST00000121149 829 ntBASIC0.69□□□□□ -2.3
Col4a6B1AVK5 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC0.69□□□□□ -2.3
Col4a6B1AVK5 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC0.69□□□□□ -2.3
Col4a6B1AVK5 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC0.69□□□□□ -2.3
Col4a6B1AVK5 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
Col4a6B1AVK5 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
Col4a6B1AVK5 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
Col4a6B1AVK5 Gm14791-201ENSMUST00000119061 1166 ntBASIC0.68□□□□□ -2.3
Col4a6B1AVK5 Gm12507-201ENSMUST00000119155 415 ntBASIC0.68□□□□□ -2.3
Col4a6B1AVK5 Gm22425-201ENSMUST00000158532 138 ntBASIC0.68□□□□□ -2.3
Col4a6B1AVK5 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
Col4a6B1AVK5 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC0.68□□□□□ -2.3
Col4a6B1AVK5 Mir7091-201ENSMUST00000184075 79 ntBASIC0.68□□□□□ -2.3
Col4a6B1AVK5 Igkv1-136-201ENSMUST00000200635 297 ntBASIC0.68□□□□□ -2.3
Col4a6B1AVK5 AC132954.1-201ENSMUST00000221017 342 ntBASIC0.68□□□□□ -2.3
Col4a6B1AVK5 AC133176.1-201ENSMUST00000226668 219 ntBASIC0.68□□□□□ -2.3
Col4a6B1AVK5 Gm23245-201ENSMUST00000083370 135 ntBASIC0.68□□□□□ -2.3
Col4a6B1AVK5 Mir300-201ENSMUST00000083485 79 ntBASIC0.68□□□□□ -2.3
Col4a6B1AVK5 Gm37761-201ENSMUST00000194989 2098 ntBASIC0.67□□□□□ -2.3
Col4a6B1AVK5 Gm22270-201ENSMUST00000104034 132 ntBASIC0.67□□□□□ -2.3
Col4a6B1AVK5 Gm24777-201ENSMUST00000157644 107 ntBASIC0.67□□□□□ -2.3
Col4a6B1AVK5 Gm23897-201ENSMUST00000158110 158 ntBASIC0.67□□□□□ -2.3
Col4a6B1AVK5 Gm22663-201ENSMUST00000158721 102 ntBASIC0.67□□□□□ -2.3
Col4a6B1AVK5 Gm16162-201ENSMUST00000162296 297 ntBASIC0.67□□□□□ -2.3
Col4a6B1AVK5 Gm21754-201ENSMUST00000177550 479 ntBASIC0.67□□□□□ -2.3
Col4a6B1AVK5 Gm22131-201ENSMUST00000178415 94 ntBASIC0.67□□□□□ -2.3
Col4a6B1AVK5 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
Col4a6B1AVK5 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC0.67□□□□□ -2.3
Col4a6B1AVK5 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC0.67□□□□□ -2.3
Col4a6B1AVK5 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
Col4a6B1AVK5 Gm18691-201ENSMUST00000203593 872 ntBASIC0.67□□□□□ -2.3
Col4a6B1AVK5 Gm44989-201ENSMUST00000204749 217 ntBASIC0.67□□□□□ -2.3
Col4a6B1AVK5 Gm44655-201ENSMUST00000207768 423 ntBASIC0.67□□□□□ -2.3
Col4a6B1AVK5 Gm33654-201ENSMUST00000221704 215 ntBASIC0.67□□□□□ -2.3
Col4a6B1AVK5 CT010454.1-201ENSMUST00000225975 265 ntBASIC0.67□□□□□ -2.3
Col4a6B1AVK5 Gm23924-201ENSMUST00000082474 108 ntBASIC0.67□□□□□ -2.3
Col4a6B1AVK5 Mir224-201ENSMUST00000083608 82 ntBASIC0.67□□□□□ -2.3
Col4a6B1AVK5 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
Col4a6B1AVK5 Gm44562-201ENSMUST00000207194 1347 ntBASIC0.67□□□□□ -2.3
Col4a6B1AVK5 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC0.66□□□□□ -2.3
Col4a6B1AVK5 Gm24431-201ENSMUST00000104073 66 ntBASIC0.66□□□□□ -2.3
Col4a6B1AVK5 Gm15382-201ENSMUST00000118011 537 ntBASIC0.66□□□□□ -2.3
Col4a6B1AVK5 Mup-ps15-201ENSMUST00000121741 539 ntBASIC0.66□□□□□ -2.3
Col4a6B1AVK5 Gm25961-201ENSMUST00000157174 135 ntBASIC0.66□□□□□ -2.3
Col4a6B1AVK5 Gm22082-201ENSMUST00000157587 161 ntBASIC0.66□□□□□ -2.3
Col4a6B1AVK5 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
Col4a6B1AVK5 Gm43286-201ENSMUST00000197420 424 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms