Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Gm44825-201ENSMUST00000207557 150 ntBASIC1.63□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm44598-201ENSMUST00000207566 150 ntBASIC1.63□□□□□ -2.15
Trbv1A0A0B4J1G7 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC1.63□□□□□ -2.15
Trbv1A0A0B4J1G7 AC158598.1-201ENSMUST00000214349 3847 ntBASIC1.63□□□□□ -2.15
Trbv1A0A0B4J1G7 AC153957.1-201ENSMUST00000215235 229 ntBASIC1.63□□□□□ -2.15
Trbv1A0A0B4J1G7 CT010480.1-201ENSMUST00000223612 363 ntBASIC1.63□□□□□ -2.15
Trbv1A0A0B4J1G7 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC1.63□□□□□ -2.15
Trbv1A0A0B4J1G7 AC112935.1-201ENSMUST00000227603 250 ntBASIC1.63□□□□□ -2.15
Trbv1A0A0B4J1G7 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Trbv1A0A0B4J1G7 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Trbv1A0A0B4J1G7 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm23042-201ENSMUST00000083866 101 ntBASIC1.63□□□□□ -2.15
Trbv1A0A0B4J1G7 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm42770-201ENSMUST00000199657 4155 ntBASIC1.62□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm381-201ENSMUST00000117443 2037 ntBASIC1.62□□□□□ -2.15
Trbv1A0A0B4J1G7 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
Trbv1A0A0B4J1G7 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Trbv1A0A0B4J1G7 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC1.62□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm14793-201ENSMUST00000118739 311 ntBASIC1.62□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm13602-201ENSMUST00000122405 493 ntBASIC1.62□□□□□ -2.15
Trbv1A0A0B4J1G7 Mir1942-201ENSMUST00000157274 63 ntBASIC1.62□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm2343-201ENSMUST00000161177 1042 ntBASIC1.62□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC1.62□□□□□ -2.15
Trbv1A0A0B4J1G7 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Trbv1A0A0B4J1G7 Mir5101-201ENSMUST00000175181 83 ntBASIC1.62□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm22633-201ENSMUST00000179834 107 ntBASIC1.62□□□□□ -2.15
Trbv1A0A0B4J1G7 Mir6370-201ENSMUST00000183510 120 ntBASIC1.62□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC1.62□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC1.62□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm37081-201ENSMUST00000192034 196 ntBASIC1.62□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm9236-201ENSMUST00000196892 587 ntBASIC1.62□□□□□ -2.15
Trbv1A0A0B4J1G7 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC1.62□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC1.62□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm42475-201ENSMUST00000201212 295 ntBASIC1.62□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm45658-201ENSMUST00000209197 580 ntBASIC1.62□□□□□ -2.15
Trbv1A0A0B4J1G7 AC130222.1-201ENSMUST00000221198 256 ntBASIC1.62□□□□□ -2.15
Trbv1A0A0B4J1G7 AC158521.1-201ENSMUST00000225295 660 ntBASIC1.62□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm23454-201ENSMUST00000083332 133 ntBASIC1.62□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm24698-201ENSMUST00000083883 130 ntBASIC1.62□□□□□ -2.15
Trbv1A0A0B4J1G7 Olfr575-201ENSMUST00000084812 957 ntBASIC1.62□□□□□ -2.15
Trbv1A0A0B4J1G7 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
Trbv1A0A0B4J1G7 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC1.62□□□□□ -2.15
Trbv1A0A0B4J1G7 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm25876-201ENSMUST00000104329 119 ntBASIC1.61□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm22674-201ENSMUST00000104413 131 ntBASIC1.61□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC1.61□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm14670-201ENSMUST00000117327 337 ntBASIC1.61□□□□□ -2.15
Trbv1A0A0B4J1G7 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Trbv1A0A0B4J1G7 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC1.61□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm26424-201ENSMUST00000122530 104 ntBASIC1.61□□□□□ -2.15
Trbv1A0A0B4J1G7 n-R5s80-201ENSMUST00000122596 111 ntBASIC1.61□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC1.61□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm25113-201ENSMUST00000157185 143 ntBASIC1.61□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm9022-202ENSMUST00000183285 483 ntBASIC1.61□□□□□ -2.15
Trbv1A0A0B4J1G7 Mir6995-201ENSMUST00000183658 71 ntBASIC1.61□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm29550-201ENSMUST00000185543 285 ntBASIC1.61□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm28627-201ENSMUST00000186141 453 ntBASIC1.61□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC1.61□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm10193-201ENSMUST00000188288 231 ntBASIC1.61□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm37727-201ENSMUST00000191637 819 ntBASIC1.61□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm18964-201ENSMUST00000193013 563 ntBASIC1.61□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm37599-201ENSMUST00000193067 489 ntBASIC1.61□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm33354-201ENSMUST00000195448 906 ntBASIC1.61□□□□□ -2.15
Trbv1A0A0B4J1G7 Igkv12-49-201ENSMUST00000197714 278 ntBASIC1.61□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm42164-201ENSMUST00000198881 379 ntBASIC1.61□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm43587-201ENSMUST00000199590 204 ntBASIC1.61□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm45240-201ENSMUST00000211437 674 ntBASIC1.61□□□□□ -2.15
Trbv1A0A0B4J1G7 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC1.61□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm17890-201ENSMUST00000221419 757 ntBASIC1.61□□□□□ -2.15
Trbv1A0A0B4J1G7 AC120553.1-201ENSMUST00000227313 260 ntBASIC1.61□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm10298-201ENSMUST00000074801 265 ntBASIC1.61□□□□□ -2.15
Trbv1A0A0B4J1G7 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm23517-201ENSMUST00000082830 192 ntBASIC1.61□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm24045-201ENSMUST00000083113 98 ntBASIC1.61□□□□□ -2.15
Trbv1A0A0B4J1G7 Snord14d-201ENSMUST00000083424 86 ntBASIC1.61□□□□□ -2.15
Trbv1A0A0B4J1G7 Mir93-201ENSMUST00000083593 88 ntBASIC1.61□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm15303-201ENSMUST00000118676 2624 ntBASIC1.61□□□□□ -2.15
Trbv1A0A0B4J1G7 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Trbv1A0A0B4J1G7 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Trbv1A0A0B4J1G7 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Trbv1A0A0B4J1G7 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC1.6□□□□□ -2.15
Trbv1A0A0B4J1G7 Mir465c-2-201ENSMUST00000104757 81 ntBASIC1.6□□□□□ -2.15
Trbv1A0A0B4J1G7 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC1.6□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm15077-201ENSMUST00000122344 362 ntBASIC1.6□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm16355-201ENSMUST00000128606 231 ntBASIC1.6□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm23981-201ENSMUST00000157136 106 ntBASIC1.6□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm22037-201ENSMUST00000157280 296 ntBASIC1.6□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm24601-201ENSMUST00000157970 143 ntBASIC1.6□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm23352-201ENSMUST00000158428 64 ntBASIC1.6□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm4468-201ENSMUST00000170206 294 ntBASIC1.6□□□□□ -2.15
Trbv1A0A0B4J1G7 Mir3092-201ENSMUST00000174954 96 ntBASIC1.6□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm24168-201ENSMUST00000178825 107 ntBASIC1.6□□□□□ -2.15
Trbv1A0A0B4J1G7 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC1.6□□□□□ -2.15
Trbv1A0A0B4J1G7 Mir6950-201ENSMUST00000184438 73 ntBASIC1.6□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm28825-201ENSMUST00000186233 238 ntBASIC1.6□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm37771-201ENSMUST00000193121 265 ntBASIC1.6□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC1.6□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm35212-201ENSMUST00000196672 606 ntBASIC1.6□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
Trbv1A0A0B4J1G7 Gm19032-201ENSMUST00000208584 592 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms