Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Gm5277-201ENSMUST00000164923 556 ntBASIC1.57□□□□□ -2.16
Trav12-3A0A075B648 Gm20689-201ENSMUST00000176033 279 ntBASIC1.57□□□□□ -2.16
Trav12-3A0A075B648 Gm22631-201ENSMUST00000179656 94 ntBASIC1.57□□□□□ -2.16
Trav12-3A0A075B648 Gm27660-201ENSMUST00000184028 208 ntBASIC1.57□□□□□ -2.16
Trav12-3A0A075B648 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Trav12-3A0A075B648 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
Trav12-3A0A075B648 Gm28404-201ENSMUST00000190242 453 ntBASIC1.57□□□□□ -2.16
Trav12-3A0A075B648 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC1.57□□□□□ -2.16
Trav12-3A0A075B648 Gm42672-201ENSMUST00000197821 352 ntBASIC1.57□□□□□ -2.16
Trav12-3A0A075B648 Gm43680-201ENSMUST00000199466 340 ntBASIC1.57□□□□□ -2.16
Trav12-3A0A075B648 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
Trav12-3A0A075B648 Gm43264-201ENSMUST00000202284 325 ntBASIC1.57□□□□□ -2.16
Trav12-3A0A075B648 AC153541.1-201ENSMUST00000213786 294 ntBASIC1.57□□□□□ -2.16
Trav12-3A0A075B648 Gm9370-201ENSMUST00000222787 609 ntBASIC1.57□□□□□ -2.16
Trav12-3A0A075B648 AC124569.4-201ENSMUST00000223830 1220 ntBASIC1.57□□□□□ -2.16
Trav12-3A0A075B648 Gm26328-201ENSMUST00000082821 107 ntBASIC1.57□□□□□ -2.16
Trav12-3A0A075B648 Gm25794-201ENSMUST00000083286 107 ntBASIC1.57□□□□□ -2.16
Trav12-3A0A075B648 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC1.56□□□□□ -2.16
Trav12-3A0A075B648 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.56□□□□□ -2.16
Trav12-3A0A075B648 Gm25833-201ENSMUST00000104137 133 ntBASIC1.56□□□□□ -2.16
Trav12-3A0A075B648 Gm23609-201ENSMUST00000104542 127 ntBASIC1.56□□□□□ -2.16
Trav12-3A0A075B648 Gm14215-201ENSMUST00000120578 221 ntBASIC1.56□□□□□ -2.16
Trav12-3A0A075B648 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC1.56□□□□□ -2.16
Trav12-3A0A075B648 Gm13409-201ENSMUST00000122072 546 ntBASIC1.56□□□□□ -2.16
Trav12-3A0A075B648 Gm12443-201ENSMUST00000122308 323 ntBASIC1.56□□□□□ -2.16
Trav12-3A0A075B648 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC1.56□□□□□ -2.16
Trav12-3A0A075B648 Gm22141-201ENSMUST00000157403 277 ntBASIC1.56□□□□□ -2.16
Trav12-3A0A075B648 Gm22380-201ENSMUST00000157479 95 ntBASIC1.56□□□□□ -2.16
Trav12-3A0A075B648 Gm23641-201ENSMUST00000157857 101 ntBASIC1.56□□□□□ -2.16
Trav12-3A0A075B648 Gm24053-201ENSMUST00000158620 105 ntBASIC1.56□□□□□ -2.16
Trav12-3A0A075B648 Gm22093-201ENSMUST00000158980 111 ntBASIC1.56□□□□□ -2.16
Trav12-3A0A075B648 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC1.56□□□□□ -2.16
Trav12-3A0A075B648 Gm22192-201ENSMUST00000175128 85 ntBASIC1.56□□□□□ -2.16
Trav12-3A0A075B648 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
Trav12-3A0A075B648 Gm21978-201ENSMUST00000179696 377 ntBASIC1.56□□□□□ -2.16
Trav12-3A0A075B648 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC1.56□□□□□ -2.16
Trav12-3A0A075B648 Gm18296-201ENSMUST00000192475 783 ntBASIC1.56□□□□□ -2.16
Trav12-3A0A075B648 Ighv1-1-201ENSMUST00000194912 291 ntBASIC1.56□□□□□ -2.16
Trav12-3A0A075B648 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC1.56□□□□□ -2.16
Trav12-3A0A075B648 Gm45452-201ENSMUST00000210905 177 ntBASIC1.56□□□□□ -2.16
Trav12-3A0A075B648 Gm45730-201ENSMUST00000212560 395 ntBASIC1.56□□□□□ -2.16
Trav12-3A0A075B648 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC1.56□□□□□ -2.16
Trav12-3A0A075B648 AC158606.1-201ENSMUST00000220078 325 ntBASIC1.56□□□□□ -2.16
Trav12-3A0A075B648 Gm35558-203ENSMUST00000222264 204 ntBASIC1.56□□□□□ -2.16
Trav12-3A0A075B648 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.56□□□□□ -2.16
Trav12-3A0A075B648 Gm25632-201ENSMUST00000083112 85 ntBASIC1.56□□□□□ -2.16
Trav12-3A0A075B648 Gm26265-201ENSMUST00000083277 135 ntBASIC1.56□□□□□ -2.16
Trav12-3A0A075B648 AC124426.1-203ENSMUST00000221814 1362 ntBASIC1.56□□□□□ -2.16
Trav12-3A0A075B648 Gm45558-201ENSMUST00000209384 1895 ntBASIC1.56□□□□□ -2.16
Trav12-3A0A075B648 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC1.56□□□□□ -2.16
Trav12-3A0A075B648 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
Trav12-3A0A075B648 AC158598.1-201ENSMUST00000214349 3847 ntBASIC1.56□□□□□ -2.16
Trav12-3A0A075B648 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Trav12-3A0A075B648 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC1.55□□□□□ -2.16
Trav12-3A0A075B648 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC1.55□□□□□ -2.16
Trav12-3A0A075B648 Gm22657-201ENSMUST00000104197 132 ntBASIC1.55□□□□□ -2.16
Trav12-3A0A075B648 Gm23128-201ENSMUST00000104257 132 ntBASIC1.55□□□□□ -2.16
Trav12-3A0A075B648 Gm13728-201ENSMUST00000117471 400 ntBASIC1.55□□□□□ -2.16
Trav12-3A0A075B648 Gm11935-201ENSMUST00000118608 399 ntBASIC1.55□□□□□ -2.16
Trav12-3A0A075B648 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC1.55□□□□□ -2.16
Trav12-3A0A075B648 Gm23000-201ENSMUST00000157083 139 ntBASIC1.55□□□□□ -2.16
Trav12-3A0A075B648 Gm25113-201ENSMUST00000157185 143 ntBASIC1.55□□□□□ -2.16
Trav12-3A0A075B648 Gm23829-201ENSMUST00000157392 270 ntBASIC1.55□□□□□ -2.16
Trav12-3A0A075B648 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
Trav12-3A0A075B648 Mir7037-201ENSMUST00000184414 65 ntBASIC1.55□□□□□ -2.16
Trav12-3A0A075B648 Gm18356-201ENSMUST00000185677 623 ntBASIC1.55□□□□□ -2.16
Trav12-3A0A075B648 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC1.55□□□□□ -2.16
Trav12-3A0A075B648 Gm8747-201ENSMUST00000195392 751 ntBASIC1.55□□□□□ -2.16
Trav12-3A0A075B648 Gm23128-202ENSMUST00000196578 133 ntBASIC1.55□□□□□ -2.16
Trav12-3A0A075B648 Gm3724-201ENSMUST00000197957 349 ntBASIC1.55□□□□□ -2.16
Trav12-3A0A075B648 AC124542.1-201ENSMUST00000205588 908 ntBASIC1.55□□□□□ -2.16
Trav12-3A0A075B648 Gm44910-201ENSMUST00000208451 396 ntBASIC1.55□□□□□ -2.16
Trav12-3A0A075B648 AC188459.1-201ENSMUST00000216651 300 ntBASIC1.55□□□□□ -2.16
Trav12-3A0A075B648 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC1.55□□□□□ -2.16
Trav12-3A0A075B648 AC154521.1-201ENSMUST00000222635 330 ntBASIC1.55□□□□□ -2.16
Trav12-3A0A075B648 Gm23456-201ENSMUST00000083335 137 ntBASIC1.55□□□□□ -2.16
Trav12-3A0A075B648 Mir132-201ENSMUST00000083603 66 ntBASIC1.55□□□□□ -2.16
Trav12-3A0A075B648 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.55□□□□□ -2.16
Trav12-3A0A075B648 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC1.55□□□□□ -2.16
Trav12-3A0A075B648 AC125374.3-201ENSMUST00000214983 2810 ntBASIC1.55□□□□□ -2.16
Trav12-3A0A075B648 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.55□□□□□ -2.16
Trav12-3A0A075B648 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Trav12-3A0A075B648 AC122828.3-201ENSMUST00000223019 3915 ntBASIC1.54□□□□□ -2.16
Trav12-3A0A075B648 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Trav12-3A0A075B648 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC1.54□□□□□ -2.16
Trav12-3A0A075B648 Gm22678-201ENSMUST00000116974 101 ntBASIC1.54□□□□□ -2.16
Trav12-3A0A075B648 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC1.54□□□□□ -2.16
Trav12-3A0A075B648 Gm15215-201ENSMUST00000117773 489 ntBASIC1.54□□□□□ -2.16
Trav12-3A0A075B648 Gm14833-201ENSMUST00000118345 1027 ntBASIC1.54□□□□□ -2.16
Trav12-3A0A075B648 Gm11363-201ENSMUST00000121672 548 ntBASIC1.54□□□□□ -2.16
Trav12-3A0A075B648 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC1.54□□□□□ -2.16
Trav12-3A0A075B648 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC1.54□□□□□ -2.16
Trav12-3A0A075B648 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC1.54□□□□□ -2.16
Trav12-3A0A075B648 Gm23725-201ENSMUST00000177876 107 ntBASIC1.54□□□□□ -2.16
Trav12-3A0A075B648 Gm22166-201ENSMUST00000178419 121 ntBASIC1.54□□□□□ -2.16
Trav12-3A0A075B648 Gm23288-201ENSMUST00000179213 121 ntBASIC1.54□□□□□ -2.16
Trav12-3A0A075B648 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC1.54□□□□□ -2.16
Trav12-3A0A075B648 Trbv22-201ENSMUST00000191697 291 ntBASIC1.54□□□□□ -2.16
Trav12-3A0A075B648 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
Trav12-3A0A075B648 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC1.54□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms