Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Gm28000-201ENSMUST00000184380 85 ntBASIC0.8□□□□□ -2.28
Trav4-2A0A075B638 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC0.8□□□□□ -2.28
Trav4-2A0A075B638 Trbv7-201ENSMUST00000193339 402 ntBASIC0.8□□□□□ -2.28
Trav4-2A0A075B638 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
Trav4-2A0A075B638 Gm42739-201ENSMUST00000200687 226 ntBASIC0.8□□□□□ -2.28
Trav4-2A0A075B638 Gm19649-201ENSMUST00000201126 822 ntBASIC0.8□□□□□ -2.28
Trav4-2A0A075B638 AC154552.4-201ENSMUST00000222171 151 ntBASIC0.8□□□□□ -2.28
Trav4-2A0A075B638 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
Trav4-2A0A075B638 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
Trav4-2A0A075B638 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
Trav4-2A0A075B638 Gm23100-201ENSMUST00000083455 141 ntBASIC0.8□□□□□ -2.28
Trav4-2A0A075B638 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
Trav4-2A0A075B638 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 Gm22779-201ENSMUST00000104085 107 ntBASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 Gm23907-201ENSMUST00000104595 189 ntBASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 Mir669d-201ENSMUST00000104644 121 ntBASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 Gm12656-201ENSMUST00000118149 577 ntBASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 Gm6923-201ENSMUST00000118343 406 ntBASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 Gm12889-201ENSMUST00000118684 241 ntBASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 Gm12044-201ENSMUST00000120335 213 ntBASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 Gm14530-201ENSMUST00000122391 333 ntBASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 Gm23713-201ENSMUST00000157353 70 ntBASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 Gm25333-201ENSMUST00000158035 246 ntBASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 Gm22615-201ENSMUST00000158102 70 ntBASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 Gm24677-201ENSMUST00000158755 150 ntBASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 Gm25831-201ENSMUST00000158924 163 ntBASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 Gm20415-201ENSMUST00000172877 423 ntBASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 Gm18358-201ENSMUST00000173179 1277 ntBASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 Gm21758-201ENSMUST00000179336 819 ntBASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 Gm29231-201ENSMUST00000179850 319 ntBASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 Gm27878-201ENSMUST00000184000 106 ntBASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 Mir6399-201ENSMUST00000184050 84 ntBASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 Gm28838-201ENSMUST00000186338 315 ntBASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 Gm29635-201ENSMUST00000187221 315 ntBASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 Gm29026-201ENSMUST00000187787 315 ntBASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 Gm28797-201ENSMUST00000188543 315 ntBASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 Gm28855-201ENSMUST00000188680 315 ntBASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 Gm29647-201ENSMUST00000188795 666 ntBASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 Gm20832-201ENSMUST00000189076 665 ntBASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 Gm28705-201ENSMUST00000189548 315 ntBASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 Gm29657-201ENSMUST00000189807 342 ntBASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 Gm28939-201ENSMUST00000190351 315 ntBASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 Gm28223-201ENSMUST00000190469 315 ntBASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 Gm29092-201ENSMUST00000190768 315 ntBASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 Gm28241-201ENSMUST00000190916 235 ntBASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 Gm28504-201ENSMUST00000190977 666 ntBASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 Gm35843-201ENSMUST00000193716 666 ntBASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 Gm36728-201ENSMUST00000195782 665 ntBASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 Gm43402-201ENSMUST00000197159 159 ntBASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 Gm18598-201ENSMUST00000207724 597 ntBASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 Gm9068-201ENSMUST00000217393 455 ntBASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 AC165106.2-201ENSMUST00000226749 97 ntBASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 Mir22-201ENSMUST00000083595 95 ntBASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 Gm25683-201ENSMUST00000083940 131 ntBASIC0.79□□□□□ -2.28
Trav4-2A0A075B638 Gm24068-201ENSMUST00000104513 132 ntBASIC0.78□□□□□ -2.28
Trav4-2A0A075B638 Gm22091-201ENSMUST00000116908 127 ntBASIC0.78□□□□□ -2.28
Trav4-2A0A075B638 Gm11845-201ENSMUST00000117886 327 ntBASIC0.78□□□□□ -2.28
Trav4-2A0A075B638 Gm2003-201ENSMUST00000118537 636 ntBASIC0.78□□□□□ -2.28
Trav4-2A0A075B638 Gm6587-201ENSMUST00000120219 613 ntBASIC0.78□□□□□ -2.28
Trav4-2A0A075B638 Gm12881-201ENSMUST00000121191 203 ntBASIC0.78□□□□□ -2.28
Trav4-2A0A075B638 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC0.78□□□□□ -2.28
Trav4-2A0A075B638 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC0.78□□□□□ -2.28
Trav4-2A0A075B638 Gm23587-201ENSMUST00000157658 84 ntBASIC0.78□□□□□ -2.28
Trav4-2A0A075B638 Gm22527-201ENSMUST00000158816 106 ntBASIC0.78□□□□□ -2.28
Trav4-2A0A075B638 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC0.78□□□□□ -2.28
Trav4-2A0A075B638 Mir7091-201ENSMUST00000184075 79 ntBASIC0.78□□□□□ -2.28
Trav4-2A0A075B638 Gm27715-201ENSMUST00000184714 260 ntBASIC0.78□□□□□ -2.28
Trav4-2A0A075B638 Gm37579-201ENSMUST00000194291 142 ntBASIC0.78□□□□□ -2.28
Trav4-2A0A075B638 Gm29950-201ENSMUST00000195273 237 ntBASIC0.78□□□□□ -2.28
Trav4-2A0A075B638 Gm44128-201ENSMUST00000204909 219 ntBASIC0.78□□□□□ -2.28
Trav4-2A0A075B638 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC0.78□□□□□ -2.28
Trav4-2A0A075B638 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC0.78□□□□□ -2.28
Trav4-2A0A075B638 AC138290.2-201ENSMUST00000218822 369 ntBASIC0.78□□□□□ -2.28
Trav4-2A0A075B638 Gm10298-201ENSMUST00000074801 265 ntBASIC0.78□□□□□ -2.28
Trav4-2A0A075B638 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC0.78□□□□□ -2.28
Trav4-2A0A075B638 Mir223-201ENSMUST00000102112 110 ntBASIC0.77□□□□□ -2.29
Trav4-2A0A075B638 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
Trav4-2A0A075B638 Gm22713-201ENSMUST00000116895 130 ntBASIC0.77□□□□□ -2.29
Trav4-2A0A075B638 Gm14594-201ENSMUST00000118052 537 ntBASIC0.77□□□□□ -2.29
Trav4-2A0A075B638 Gm14590-201ENSMUST00000118934 537 ntBASIC0.77□□□□□ -2.29
Trav4-2A0A075B638 Gm14913-201ENSMUST00000120011 1093 ntBASIC0.77□□□□□ -2.29
Trav4-2A0A075B638 Gm23429-201ENSMUST00000122486 149 ntBASIC0.77□□□□□ -2.29
Trav4-2A0A075B638 Gm16129-201ENSMUST00000152628 486 ntBASIC0.77□□□□□ -2.29
Trav4-2A0A075B638 Gm23381-201ENSMUST00000157676 94 ntBASIC0.77□□□□□ -2.29
Trav4-2A0A075B638 Gm17061-201ENSMUST00000163167 499 ntBASIC0.77□□□□□ -2.29
Trav4-2A0A075B638 Gm24100-201ENSMUST00000178592 79 ntBASIC0.77□□□□□ -2.29
Trav4-2A0A075B638 Gm14596-201ENSMUST00000180268 537 ntBASIC0.77□□□□□ -2.29
Trav4-2A0A075B638 Gm14595-201ENSMUST00000180335 537 ntBASIC0.77□□□□□ -2.29
Trav4-2A0A075B638 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
Trav4-2A0A075B638 Gm28825-201ENSMUST00000186233 238 ntBASIC0.77□□□□□ -2.29
Trav4-2A0A075B638 Gm44324-201ENSMUST00000198517 135 ntBASIC0.77□□□□□ -2.29
Trav4-2A0A075B638 Mir1291-201ENSMUST00000199842 117 ntBASIC0.77□□□□□ -2.29
Trav4-2A0A075B638 Gm42976-201ENSMUST00000200313 222 ntBASIC0.77□□□□□ -2.29
Trav4-2A0A075B638 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
Trav4-2A0A075B638 Gm44666-201ENSMUST00000208544 391 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms